Pre_GI: BLASTN Hits

Some Help

Query: NC_014323:3976351 Herbaspirillum seropedicae SmR1 chromosome, complete genome

Start: 3976351, End: 4038509, Length: 62159

Host Lineage: Herbaspirillum seropedicae; Herbaspirillum; Oxalobacteraceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Root-associated nitrogen-fixing bacterium. Herbaspirillum seropedicae is an endophitic nitrogen-fixing beta-Proteobacteria found associated with important crops such as sugarcane, wheat, maize, rice and sorghum. It is non-phytopathogenic and produces interesting biotechnological products such as polybetaalkanoates and cyanophycin. Herbaspirillum seropedicae was isolated from the roots of rice plants, and is member of a group of free-living soil bacteria known to promote plant growth. The yields of rice and sorghum were significantly increased when grown in soil inoculated with Herbaspirillum seropedicae.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012559:1228280*1228280127461346334Laribacter hongkongensis HLHK9, complete genome01023BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome0910BLASTN svgBLASTP svg
NC_008463:3503576*3503576352773524160Pseudomonas aeruginosa UCBPP-PA14, complete genome0894BLASTN svgBLASTP svg
NC_015556:51564151564153855622916Pseudomonas fulva 12-X chromosome, complete genome0846BLASTN svgBLASTP svg
NC_020209:2119845*2119845214457424730Pseudomonas poae RE*1-1-14, complete genome0791BLASTN svgBLASTP svg
NC_006513:16954871695487172039324907Azoarcus sp. EbN1, complete genome0722BLASTN svgBLASTP svg
NC_012660:37448683744868377123626369Pseudomonas fluorescens SBW25 chromosome, complete genome4e-168601BLASTN svgBLASTP svg
NC_014532:22680782268078229613528058Halomonas elongata DSM 2581, complete genome5e-84321BLASTN svgBLASTP svg
NC_018691:359695*35969537768217988Alcanivorax dieselolei B5 chromosome, complete genome3e-57232BLASTN svgBLASTP svg
NC_008825:20639902063990208713723148Methylibium petroleiphilum PM1, complete genome7e-43184BLASTN svgBLASTP svg
NC_004347:79189779189781264920753Shewanella oneidensis MR-1, complete genome1e-26131BLASTN svgBLASTP svg
NC_008577:41833614183361420632622966Shewanella sp. ANA-3 chromosome 1, complete sequence4e-26129BLASTN svgBLASTP svg
NC_008543:32377332377334709923327Burkholderia cenocepacia HI2424 chromosome 2, complete sequence9e-24121BLASTN svgBLASTP svg
NC_002929:52500*525008147528976Bordetella pertussis Tohama I, complete genome1e-22117BLASTN svgBLASTP svg
NC_011770:33966373396637341954422908Pseudomonas aeruginosa LESB58, complete genome2e-21113BLASTN svgBLASTP svg
NC_008702:40644704064470409211327644Azoarcus sp. BH72, complete genome9e-21111BLASTN svgBLASTP svg
NC_013722:15778181577818160047922662Xanthomonas albilineans, complete genome3e-20109BLASTN svgBLASTP svg
NC_012792:31044331044333292422482Variovorax paradoxus S110 chromosome 2, complete genome1e-19107BLASTN svgBLASTP svg
NC_003296:16969581696958171877421817Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete5e-19105BLASTN svgBLASTP svg
NC_008322:72261272261274059917988Shewanella sp. MR-7, complete genome2e-18103BLASTN svgBLASTP svg
NC_007651:17264721726472175232825857Burkholderia thailandensis E264 chromosome I, complete sequence8e-18101BLASTN svgBLASTP svg
NC_014323:3292082*3292082331943527354Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_014323:27327273274647019144Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_008321:39644143964414398859924186Shewanella sp. MR-4, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_016010:1822212*1822212190411881907Xanthomonas axonopodis pv. citrumelo F1 chromosome, complete2e-1593.7BLASTN svgBLASTP svg
NC_014323:992978992978103436141384Herbaspirillum seropedicae SmR1 chromosome, complete genome2e-1593.7BLASTN svgBLASTP svg
NC_011901:3363500*3363500338699623497Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete3e-1489.7BLASTN svgBLASTP svg
NC_015138:1582458*1582458160012917672Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete3e-1489.7BLASTN svgBLASTP svg
NC_015138:4205986*4205986423312827143Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete1e-1387.7BLASTN svgBLASTP svg
NC_014363:16805781680578170738226805Olsenella uli DSM 7084 chromosome, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_012791:72181372181376114739335Variovorax paradoxus S110 chromosome 1, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_012723:71637716379733525699Burkholderia glumae BGR1 plasmid bglu_1p, complete sequence2e-1283.8BLASTN svgBLASTP svg
NC_008786:13320411332041135577823738Verminephrobacter eiseniae EF01-2, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_014561:15314315314317999926857Pantoea vagans C9-1 plasmid pPag1, complete sequence8e-1281.8BLASTN svgBLASTP svg
NC_007498:91969791969794610526409Pelobacter carbinolicus DSM 2380, complete genome8e-1281.8BLASTN svgBLASTP svg
NC_016048:2678205*2678205271916340959Oscillibacter valericigenes Sjm18-20, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_008782:32520923252092327781225721Acidovorax sp. JS42, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_008752:4747376*4747376477161024235Acidovorax avenae subsp. citrulli AAC00-1, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_015138:30224143022414304672924316Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete5e-1075.8BLASTN svgBLASTP svg
NC_012724:24435002443500246405820559Burkholderia glumae BGR1 chromosome 1, complete genome5e-1075.8BLASTN svgBLASTP svg
NC_008825:27006172700617271935418738Methylibium petroleiphilum PM1, complete genome5e-1075.8BLASTN svgBLASTP svg
NC_008750:80744680744683071223267Shewanella sp. W3-18-1, complete genome5e-1075.8BLASTN svgBLASTP svg
NC_005085:1269787*1269787132843458648Chromobacterium violaceum ATCC 12472, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_008577:10154191015419103464419226Shewanella sp. ANA-3 chromosome 1, complete sequence2e-0973.8BLASTN svgBLASTP svg
NC_012880:2871480*2871480289700125522Dickeya dadantii Ech703, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_014844:442380*44238048618443805Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_015563:3979500*3979500400273623237Delftia sp. Cs1-4 chromosome, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_020126:61906626190662621411323452Myxococcus stipitatus DSM 14675, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_003911:1078949*1078949111287933931Silicibacter pomeroyi DSS-3, complete genome8e-0971.9BLASTN svgBLASTP svg
NC_006177:12383*123833284720465Symbiobacterium thermophilum IAM 14863, complete genome8e-0971.9BLASTN svgBLASTP svg
NC_007492:20357612035761205955323793Pseudomonas fluorescens PfO-1, complete genome8e-0971.9BLASTN svgBLASTP svg
NC_007645:6350079*6350079637233822260Hahella chejuensis KCTC 2396, complete genome8e-0971.9BLASTN svgBLASTP svg
NC_008752:1523768*1523768154381320046Acidovorax avenae subsp. citrulli AAC00-1, complete genome8e-0971.9BLASTN svgBLASTP svg
NC_008752:27249772724977274618021204Acidovorax avenae subsp. citrulli AAC00-1, complete genome8e-0971.9BLASTN svgBLASTP svg
NC_008752:415599*41559944209126493Acidovorax avenae subsp. citrulli AAC00-1, complete genome8e-0971.9BLASTN svgBLASTP svg
NC_014500:3023762*3023762306170037939Dickeya dadantii 3937 chromosome, complete genome8e-0971.9BLASTN svgBLASTP svg
NC_015566:3659318*3659318367796918652Serratia sp. AS12 chromosome, complete genome8e-0971.9BLASTN svgBLASTP svg
NC_015711:5479879*5479879550459924721Myxococcus fulvus HW-1 chromosome, complete genome8e-0971.9BLASTN svgBLASTP svg
NC_015947:12906141290614131509924486Burkholderia sp. JV3 chromosome, complete genome8e-0971.9BLASTN svgBLASTP svg
NC_020126:4430142*4430142445344823307Myxococcus stipitatus DSM 14675, complete genome8e-0971.9BLASTN svgBLASTP svg
NC_016024:275845*27584529878822944Candidatus Chloracidobacterium thermophilum B chromosome chromosome8e-0971.9BLASTN svgBLASTP svg
NC_008025:22118132211813223283021018Deinococcus geothermalis DSM 11300, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_013592:1668092*1668092170683538744Dickeya dadantii Ech586, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_014323:4619344*4619344465241733074Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_020126:6344827*6344827637873333907Myxococcus stipitatus DSM 14675, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_003296:61200061200063500323004Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete1e-0767.9BLASTN svgBLASTP svg
NC_004129:22348512234851226009925249Pseudomonas fluorescens Pf-5, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_006055:183823*18382321230928487Mesoplasma florum L1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_007519:1244198*1244198126883324636Desulfovibrio alaskensis G20 chromosome, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_010556:141374*14137416268521312Exiguobacterium sibiricum 255-15, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_012721:10950010950012980920310Burkholderia glumae BGR1 chromosome 2, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_012721:24000024000026711727118Burkholderia glumae BGR1 chromosome 2, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_012912:777592*77759280009922508Dickeya zeae Ech1591, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_013282:37811493781149380484323695Cronobacter turicensis, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_013440:5509790*5509790553637126582Haliangium ochraceum DSM 14365, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_018643:673195*67319570659933405Alpha proteobacterium HIMB5 chromosome, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_018665:139646*13964615884819203Exiguobacterium antarcticum B7 chromosome, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_019940:1670262*1670262169388723626Thioflavicoccus mobilis 8321 chromosome, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_010556:71776*717769345921684Exiguobacterium sibiricum 255-15, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_010556:26567*265674534518779Exiguobacterium sibiricum 255-15, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_008786:17673151767315179053023216Verminephrobacter eiseniae EF01-2, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_008027:55333115533311555523921929Pseudomonas entomophila L48, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_007005:58259255825925584413718213Pseudomonas syringae pv. syringae B728a, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_004578:60899586089958612236632409Pseudomonas syringae pv. tomato str. DC3000, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_010943:14268851426885145859931715Stenotrophomonas maltophilia K279a, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_010995:44604134460413448409523683Cellvibrio japonicus Ueda107, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_012796:3600630*3600630368962888999Desulfovibrio magneticus RS-1, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_019940:1963000*1963000198871425715Thioflavicoccus mobilis 8321 chromosome, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_020209:5077410*5077410511615938750Pseudomonas poae RE*1-1-14, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_018665:71677*716779339521719Exiguobacterium antarcticum B7 chromosome, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_015942:2213710*2213710223882125112Acidithiobacillus ferrivorans SS3 chromosome, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_015711:72654397265439729106325625Myxococcus fulvus HW-1 chromosome, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_015458:24414352441435246619024756Pusillimonas sp. T7-7 chromosome, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_008752:4086283*4086283411381327531Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_008781:654289*65428967826423976Polaromonas naphthalenivorans CJ2, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_009801:14193241419324143859919276Escherichia coli E24377A, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010376:186510*18651024309956590Finegoldia magna ATCC 29328, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010376:606000*60600062469418695Finegoldia magna ATCC 29328, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010468:4455201*4455201447359918399Escherichia coli ATCC 8739, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_008563:14755001475500149389218393Escherichia coli APEC O1, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_007946:3683371*3683371370609922729Escherichia coli UTI89, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_007912:1173752*1173752119609122340Saccharophagus degradans 2-40, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_007508:50933655093365511609922735Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_006511:4119332*4119332413716217831Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC2e-0663.9BLASTN svgBLASTP svg
NC_003198:3586000*3586000360812122122Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-0663.9BLASTN svgBLASTP svg
NC_000913:4159090*4159090417760618517Escherichia coli K12, complete genome2e-0663.9BLASTN svgBLASTP svg
CU928160:4248621*4248621427441825798Escherichia coli IAI1 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
CP002516:2580774*2580774260629825525Escherichia coli KO11, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010473:4256000*4256000427821222213Escherichia coli str. K-12 substr. DH10B, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_011662:535613*53561355787622264Thauera sp. MZ1T, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_020210:2969862*2969862300083330972Geobacillus sp. GHH01, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_019771:32370003237000325826821269Anabaena cylindrica PCC 7122, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_018524:4988810*4988810503746448655Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015577:2081196*2081196213114449949Treponema azotonutricium ZAS-9 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015572:4209000*4209000424633837339Methylomonas methanica MC09 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_015177:2642368*2642368266519022823Pedobacter saltans DSM 12145 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_014915:3039639*3039639305859918961Geobacillus sp. Y412MC52 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_014910:42072274207227422797420748Alicycliphilus denitrificans BC chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_014761:1321187*1321187134459923413Oceanithermus profundus DSM 14977 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_011750:4543135*4543135456499721863Escherichia coli IAI39 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_011852:1482343*1482343150488322541Haemophilus parasuis SH0165, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_012792:54796754796758771739751Variovorax paradoxus S110 chromosome 2, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_013171:228356*22835625488926534Anaerococcus prevotii DSM 20548, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_013521:94049594049596409923605Sanguibacter keddieii DSM 10542, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_014008:3296708*3296708332809931392Coraliomargarita akajimensis DSM 45221 chromosome, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_010544:850502*85050287932828827Candidatus Phytoplasma australiense, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_010501:54420005442000546540823409Pseudomonas putida W619, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_009465:29735*297358609956365Candidatus Vesicomyosocius okutanii HA, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_008702:815264*81526484609430831Azoarcus sp. BH72, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_008543:58212958212961104528917Burkholderia cenocepacia HI2424 chromosome 2, complete sequence7e-0661.9BLASTN svgBLASTP svg
NC_008526:817628*81762883659918972Lactobacillus casei ATCC 334, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_008526:2489196*2489196251110721912Lactobacillus casei ATCC 334, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_010694:2492378*2492378251782925452Erwinia tasmaniensis, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_010999:880878*88087890041319536Lactobacillus casei, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_012856:112296322963Ralstonia pickettii 12D chromosome 1, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_013171:1420135*1420135144484824714Anaerococcus prevotii DSM 20548, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_013198:813830*81383083545121622Lactobacillus rhamnosus GG, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_013199:2536705*2536705255640419700Lactobacillus rhamnosus Lc 705, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_013199:811929*81192983409922171Lactobacillus rhamnosus Lc 705, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_013421:4714478*4714478478002665549Pectobacterium wasabiae WPP163, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_014334:769205*76920579363824434Lactobacillus casei str. Zhang chromosome, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_014909:219498*21949824042420927Candidatus Blochmannia vafer str. BVAF chromosome, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_000912:553539*55353957905125513Mycoplasma pneumoniae M129, complete genome7e-0661.9BLASTN svgBLASTP svg