Pre_GI Gene

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Host: NC_008526 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008526:2489196 Lactobacillus casei ATCC 334, complete genome

Host Lineage: Lactobacillus casei; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain was isolated from Emmental cheese. Starter culture for milk fermentation and flavor development of cheese. They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, fermented milks, and other products, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully created, cultivated, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus casei is used as a starter culture during milk fermentation and for the flavor development of certain bacterial-ripened cheeses.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
248919624928583663DNA-directed RNA polymerase beta subunit160 kD subunitQuickGO ontologyBLASTP
249287124964703600DNA-directed RNA polymerase beta subunit140 kD subunitQuickGO ontologyBLASTP
249680024993072508ATP-binding subunit of Clp protease and DnaKDnaJ chaperonesQuickGO ontologyBLASTP
24993472499814468Transcriptional repressor of class III stress genesQuickGO ontologyBLASTP
2499939250001274tRNA-ProQuickGO ontology
2500017250008872tRNA-GlyQuickGO ontology
2500135250021177tRNA-ArgQuickGO ontologyBLASTP
2500223250030886tRNA-LeuQuickGO ontologyBLASTP
2500320250039172tRNA-GlyQuickGO ontology
2500467250054983tRNA-LeuQuickGO ontology
2500567250063973tRNA-LysQuickGO ontologyBLASTP
2500642250071473tRNA-ValQuickGO ontologyBLASTP
250073525008361025S ribosomal RNAQuickGO ontologyBLASTP
25010362503550251523S ribosomal RNAQuickGO ontologyBLASTP
2504114250418673tRNA-AlaQuickGO ontology
2504218250429477tRNA-IleQuickGO ontology
25043792505946156816S ribosomal RNAQuickGO ontologyBLASTP
250636725078631497Lysyl-tRNA synthetase class IIQuickGO ontologyBLASTP
250800325090041002tRNA-dihydrouridine synthaseQuickGO ontologyBLASTP
25090672509951885Disulfide bond chaperones of the HSP33 familyQuickGO ontologyBLASTP
25102082511107900hypothetical protein