Pre_GI: BLASTN Hits

Some Help

Query: NC_012660:4734363 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 4734363, End: 4755258, Length: 20896

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012660:57932005793200583260939410Pseudomonas fluorescens SBW25 chromosome, complete genome4e-116426BLASTN svgBLASTP svg
NC_012660:35731543573154359859925446Pseudomonas fluorescens SBW25 chromosome, complete genome4e-76293BLASTN svgBLASTP svg
NC_008027:77589677589680259926704Pseudomonas entomophila L48, complete genome8e-68266BLASTN svgBLASTP svg
NC_012660:26849812684981271787932899Pseudomonas fluorescens SBW25 chromosome, complete genome3e-49204BLASTN svgBLASTP svg
NC_010501:73436373436376909934737Pseudomonas putida W619, complete genome6e-44186BLASTN svgBLASTP svg
NC_002516:35190003519000354507426075Pseudomonas aeruginosa PAO1, complete genome1e-35159BLASTN svgBLASTP svg
NC_007005:3684099*3684099370898924891Pseudomonas syringae pv. syringae B728a, complete genome9e-34153BLASTN svgBLASTP svg
NC_004578:895019*89501992169226674Pseudomonas syringae pv. tomato str. DC3000, complete genome8e-31143BLASTN svgBLASTP svg
NC_005773:866157*86615792659960443Pseudomonas syringae pv. phaseolicola 1448A, complete genome8e-31143BLASTN svgBLASTP svg
NC_007005:830467*83046785407423608Pseudomonas syringae pv. syringae B728a, complete genome8e-31143BLASTN svgBLASTP svg
NC_015556:4074367*4074367410534530979Pseudomonas fulva 12-X chromosome, complete genome5e-29137BLASTN svgBLASTP svg
NC_009439:860571*86057188549124921Pseudomonas mendocina ymp, complete genome5e-29137BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome5e-29137BLASTN svgBLASTP svg
NC_012917:46464914646491466766521175Pectobacterium carotovorum subsp. carotovorum PC1, complete genome1e-26129BLASTN svgBLASTP svg
NC_009654:4253431*4253431427667923249Marinomonas sp. MWYL1, complete genome8e-25123BLASTN svgBLASTP svg
NC_014532:988351*988351100759919249Halomonas elongata DSM 2581, complete genome1e-20109BLASTN svgBLASTP svg
NC_012997:1446037*1446037147363527599Teredinibacter turnerae T7901, complete genome3e-18101BLASTN svgBLASTP svg
NC_008260:1044440*1044440106265118212Alcanivorax borkumensis SK2, complete genome3e-18101BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome3e-18101BLASTN svgBLASTP svg
NC_015410:2505168*2505168253404528878Pseudomonas mendocina NK-01 chromosome, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_020209:19495001949500197652927030Pseudomonas poae RE*1-1-14, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_011757:51027325102732513806935338Methylobacterium chloromethanicum CM4, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_006177:10604281060428108247522048Symbiobacterium thermophilum IAM 14863, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_008570:3777469*3777469380230024832Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_011901:13983761398376142787629501Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete3e-1591.7BLASTN svgBLASTP svg
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_007606:37551553755155377834323189Shigella dysenteriae Sd197, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_020209:45495634549563457659927037Pseudomonas poae RE*1-1-14, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_002939:1480474*1480474150560725134Geobacter sulfurreducens PCA, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_009092:43376174337617437380536189Shewanella loihica PV-4, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_012660:46695004669500468960120102Pseudomonas fluorescens SBW25 chromosome, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_014837:3633378*3633378366348330106Pantoea sp. At-9b chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_012660:2045398*2045398210849663099Pseudomonas fluorescens SBW25 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_005085:24623246234912724505Chromobacterium violaceum ATCC 12472, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_008577:14896431489643151651426872Shewanella sp. ANA-3 chromosome 1, complete sequence4e-1177.8BLASTN svgBLASTP svg
NC_009138:2242470*2242470227253730068Herminiimonas arsenicoxydans, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_011769:2294387*2294387231565121265Desulfovibrio vulgaris str. 'Miyazaki F', complete genome4e-1177.8BLASTN svgBLASTP svg
NC_014394:707305*70730573388526581Gallionella capsiferriformans ES-2 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015410:22588002258800228509926300Pseudomonas mendocina NK-01 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015856:3675592*3675592370001824427Collimonas fungivorans Ter331 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_002947:4484824*4484824451609931276Pseudomonas putida KT2440, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007644:20998782099878212213022253Moorella thermoacetica ATCC 39073, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009092:1047500*1047500107272925230Shewanella loihica PV-4, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_000912:553539*55353957905125513Mycoplasma pneumoniae M129, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_006086:1329915*1329915136127431360Streptococcus pyogenes MGAS10394, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_006448:121435*12143514257121137Streptococcus thermophilus LMG 18311, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_006448:351998*35199837421022213Streptococcus thermophilus LMG 18311, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_006448:5046*50463135826313Streptococcus thermophilus LMG 18311, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_006449:121462*12146214259721136Streptococcus thermophilus CNRZ1066, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_006449:345396*34539636548520090Streptococcus thermophilus CNRZ1066, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_006449:5046*50463138626341Streptococcus thermophilus CNRZ1066, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_012891:1573435*1573435161025436820Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,6e-1073.8BLASTN svgBLASTP svg
NC_014541:29785002978500299617417675Ferrimonas balearica DSM 9799 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015760:123929*12392914613122203Streptococcus salivarius CCHSS3, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015760:343874*34387436486020987Streptococcus salivarius CCHSS3, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_015760:8914*89142721018297Streptococcus salivarius CCHSS3, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_008570:1852286*1852286187535523070Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_008740:3602367*3602367362072718361Marinobacter aquaeolei VT8, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_010424:69718769718777730380117Candidatus Desulforudis audaxviator MP104C, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015556:2265940*2265940233644770508Pseudomonas fulva 12-X chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_005085:41572574157257418052123265Chromobacterium violaceum ATCC 12472, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007005:2686551*2686551274062754077Pseudomonas syringae pv. syringae B728a, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008609:27872742787274281055923286Pelobacter propionicus DSM 2379, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009092:15043631504363158010375741Shewanella loihica PV-4, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013093:31578973157897318209324197Actinosynnema mirum DSM 43827, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018691:1864796*1864796190445339658Alcanivorax dieselolei B5 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002947:61525006152500618549933000Pseudomonas putida KT2440, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004578:32416183241618326508823471Pseudomonas syringae pv. tomato str. DC3000, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008027:23316172331617235762526009Pseudomonas entomophila L48, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008463:2654014*2654014267605522042Pseudomonas aeruginosa UCBPP-PA14, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008463:52469545246954530671059757Pseudomonas aeruginosa UCBPP-PA14, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011386:1727203*1727203175090123699Oligotropha carboxidovorans OM5, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011770:3735162*3735162376383628675Pseudomonas aeruginosa LESB58, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012559:85450785450789459940093Laribacter hongkongensis HLHK9, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015424:4251369*4251369427627324905Aeromonas veronii B565 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015711:57091057091059864327734Myxococcus fulvus HW-1 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003112:498465*49846553573337269Neisseria meningitidis MC58, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_005773:32535753253575328174728173Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007298:1129889*1129889115580225914Dechloromonas aromatica RCB, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008340:1241300*1241300125980118502Alkalilimnicola ehrlichei MLHE-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008781:19738261973826199696823143Polaromonas naphthalenivorans CJ2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011899:2286884*2286884231116224279Halothermothrix orenii H 168, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011899:948790*94879096756618777Halothermothrix orenii H 168, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012660:1579204*1579204162109241889Pseudomonas fluorescens SBW25 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009454:2663539*2663539269835134813Pelotomaculum thermopropionicum SI, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008702:2039462*2039462206354724086Azoarcus sp. BH72, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008577:41833614183361420632622966Shewanella sp. ANA-3 chromosome 1, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_008576:3812500*3812500383287320374Magnetococcus sp. MC-1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008576:1061171*1061171108033619166Magnetococcus sp. MC-1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007575:1694877*1694877171700722131Sulfurimonas denitrificans DSM 1251, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_004129:57814135781413580497523563Pseudomonas fluorescens Pf-5, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010501:30000300007042840429Pseudomonas putida W619, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012660:5571500*5571500559959928100Pseudomonas fluorescens SBW25 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_020209:49437344943734497459930866Pseudomonas poae RE*1-1-14, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015733:26583372658337270338145045Pseudomonas putida S16 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015144:997587*997587102029322707Weeksella virosa DSM 16922 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014833:3667748*3667748368799920252Ruminococcus albus 7 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014833:1539678*1539678155896019283Ruminococcus albus 7 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014041:661352*66135268452923178Zunongwangia profunda SM-A87 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013440:55436675543667556612422458Haliangium ochraceum DSM 14365, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008570:3083850*3083850310907525226Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome1e-0560BLASTN svgBLASTP svg
NC_008570:23650023650025959923100Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome1e-0560BLASTN svgBLASTP svg
NC_007644:3229*32292661523387Moorella thermoacetica ATCC 39073, complete genome1e-0560BLASTN svgBLASTP svg
NC_007492:33840773384077341717433098Pseudomonas fluorescens PfO-1, complete genome1e-0560BLASTN svgBLASTP svg
NC_004578:11537381153738117268818951Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-0560BLASTN svgBLASTP svg
NC_004547:13850013850015906820569Erwinia carotovora subsp. atroseptica SCRI1043, complete genome1e-0560BLASTN svgBLASTP svg
NC_003296:61200061200063500323004Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, complete1e-0560BLASTN svgBLASTP svg
NC_003295:3688000*3688000372599938000Ralstonia solanacearum GMI1000, complete genome1e-0560BLASTN svgBLASTP svg
NC_009074:3791232*3791232381784126610Burkholderia pseudomallei 668 chromosome I, complete sequence1e-0560BLASTN svgBLASTP svg
NC_009076:3876733*3876733389976123029Burkholderia pseudomallei 1106a chromosome I, complete sequence1e-0560BLASTN svgBLASTP svg
NC_015379:1151143*1151143118279531653Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,1e-0560BLASTN svgBLASTP svg
NC_014844:1634985*1634985166007225088Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_014654:2138794*2138794216285324060Halanaerobium sp. 'sapolanicus' chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_014654:1*12910529105Halanaerobium sp. 'sapolanicus' chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_013855:670285*67028569312522841Azospirillum sp. B510 plasmid pAB510a, complete sequence1e-0560BLASTN svgBLASTP svg
NC_013851:3142182*3142182316259920418Allochromatium vinosum DSM 180 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_012660:1737423*1737423176616428742Pseudomonas fluorescens SBW25 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_011146:896000*89600091840322404Geobacter bemidjiensis Bem, complete genome1e-0560BLASTN svgBLASTP svg
NC_001263:66266666266668995627291Deinococcus radiodurans R1 chromosome 1, complete sequence1e-0560BLASTN svgBLASTP svg