Pre_GI Gene

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Host: NC_007005 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007005:3684099 Pseudomonas syringae pv. syringae B728a, complete genome

Host Lineage: Pseudomonas syringae; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is the causal agent of brown spot disease on beans. It was isolated from a snap bean leaflet in Wisconsin, USA. Plant pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This species includes many plant pathogens of important crops, which makes it a model organism in plant pathology. Its natural environment is on the surface of plant leaves and it can withstand various stressful conditions, like rain, wind, UV radiation and drought. It can colonize plants in a non-pathogenic state and can rapidly take advantage of changing environmental conditions to induce disease in susceptible plants by shifting gene expression patterns.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
368667836878111134Secretion protein HlyDQuickGO ontologyBLASTP
36878283688676849MltA-interacting MipAQuickGO ontologyBLASTP
368869636901681473RND efflux system outer membrane lipoprotein NodTQuickGO ontologyBLASTP
36902673690956690Response regulator receiverTranscriptional regulatory protein C-terminalQuickGO ontologyBLASTP
369096236921371176ATP-binding region ATPase-likeHistidine kinase HAMP regionHistidine kinase A N-terminalQuickGO ontologyBLASTP
369216136936481488Sulfate transporterantisigma-factor antagonist STASSulphate transporterQuickGO ontologyBLASTP
369406736954851419regulatory protein GntRAminotransferase class I and IIQuickGO ontologyBLASTP
369576536969731209Glycosyl transferase group 1QuickGO ontologyBLASTP
369702837050978070Hemolysin-type calcium-binding regionHaemolysin-type calcium binding relatedQuickGO ontologyBLASTP
37051033705765663hypothetical protein
3706447370652276tRNA-AsnQuickGO ontologyBLASTP
37067303707404675Response regulator receiverTranscriptional regulatory protein C-terminalQuickGO ontologyBLASTP
37074253708297873PAP2 superfamily proteinQuickGO ontologyBLASTP
37082943708989696hypothetical proteinBLASTP