Pre_GI Gene

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Host: NC_012660 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012660:5571500 Pseudomonas fluorescens SBW25 chromosome, complete genome

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
55715835572497915preprotein translocase subunit SecFQuickGO ontologyBLASTP
557250755743781872preprotein translocase subunit SecDQuickGO ontologyBLASTP
55744385574776339preprotein translocase subunit YajCQuickGO ontologyBLASTP
557482055759441125queuine tRNA-ribosyltransferaseQuickGO ontologyBLASTP
557594155769901050S-adenosylmethioninetRNA ribosyltransferase-isomeraseQuickGO ontologyBLASTP
5577099557718082tRNA-LeuQuickGO ontologyBLASTP
557725355785901338putative integraseQuickGO ontologyBLASTP
55788375579781945hypothetical proteinBLASTP
55798625580539678hypothetical proteinBLASTP
55806035580812210hypothetical protein
55810575581764708hypothetical protein
558247055839931524putative ATP-binding proteinQuickGO ontologyBLASTP
55841365584960825hypothetical protein
558541855871481731hypothetical proteinBLASTP
558714555891061962hypothetical proteinBLASTP
55891615589367207hypothetical protein
55899365590346411putative two-component system response regulatorQuickGO ontologyBLASTP
559090655919821077chemotaxis-specific methylesteraseQuickGO ontologyBLASTP
55919455592478534chemoreceptor glutamine deamidase CheDQuickGO ontologyBLASTP
55924755593284810chemotaxis response glutamate methyltransferaseQuickGO ontologyBLASTP
55932945593833540putative chemotaxis protein CheWQuickGO ontologyBLASTP
559387355955311659putative methyl-accepting chemotaxis proteinQuickGO ontologyBLASTP
559556155976002040putative chemotaxis two-component system sensor histidine kinase proteinQuickGO ontologyBLASTP
55976415597928288hypothetical proteinBLASTP
55979525598320369putative chemotaxis two-component system response regulatorQuickGO ontologyBLASTP
559833055995411212putative chemotaxis-like proteinQuickGO ontologyBLASTP