Pre_GI Gene

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Host: NC_009092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009092:1047500 Shewanella loihica PV-4, complete genome

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
104774010494581719methyl-accepting chemotaxis sensory transducerQuickGO ontologyBLASTP
104957310524522880valyl-tRNA synthetaseQuickGO ontologyBLASTP
10524771052938462DNA polymerase III chi subunit HolCQuickGO ontologyBLASTP
105361910550851467hypothetical proteinBLASTP
10551751055828654hypothetical proteinBLASTP
105737110591191749Amidohydrolase 3QuickGO ontologyBLASTP
105939010604031014transposase IS116IS110IS902 family proteinQuickGO ontologyBLASTP
106103410641113078Ig family proteinQuickGO ontology
10645051065080576AMMECR1 domain proteinQuickGO ontologyBLASTP
10650581065858801protein of unknown function DUF52QuickGO ontologyBLASTP
106592110670091089Radical SAM domain proteinQuickGO ontologyBLASTP
10670491067720672Methyltransferase type 11QuickGO ontologyBLASTP
10678361068750915TPR repeat-containing proteinQuickGO ontologyBLASTP
106913010727293600peptidase S8 and S53 subtilisin kexin sedolisinQuickGO ontologyBLASTP