Pre_GI: BLASTN Hits

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Query: NC_011748:4695932 Escherichia coli 55989, complete genome

Start: 4695932, End: 4717521, Length: 21590

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from the diarrheagenic stools of an HIV-positive adult suffering from persistent watery diarrhea in Central African Republic. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
CU928145:46959324695932471752121590Escherichia coli 55989 chromosome, complete genome042590BLASTN svgBLASTP svg
NC_008253:45419154541915456410622192Escherichia coli 536, complete genome023690BLASTN svgBLASTP svg
NC_004431:48676484867648489054022893Escherichia coli CFT073, complete genome022830BLASTN svgBLASTP svg
NC_008563:46560004656000467809922100Escherichia coli APEC O1, complete genome022760BLASTN svgBLASTP svg
AP010958:50221965022196504082118626Escherichia coli O103:H2 str. 12009 DNA, complete genome022590BLASTN svgBLASTP svg
NC_010468:43051054305105432709121987Escherichia coli ATCC 8739, complete genome019910BLASTN svgBLASTP svg
NC_011751:47959284795928481882822901Escherichia coli UMN026 chromosome, complete genome017400BLASTN svgBLASTP svg
CP002185:45661504566150459009923950Escherichia coli W, complete genome016070BLASTN svgBLASTP svg
NC_009800:43322294332229435609923871Escherichia coli HS, complete genome016000BLASTN svgBLASTP svg
NC_009801:46430004643000466340420405Escherichia coli E24377A, complete genome015830BLASTN svgBLASTP svg
CU928160:43951564395156441536720212Escherichia coli IAI1 chromosome, complete genome015740BLASTN svgBLASTP svg
NC_007384:45300004530000455031620317Shigella sonnei Ss046, complete genome015270BLASTN svgBLASTP svg
NC_011750:47194774719477473972720251Escherichia coli IAI39 chromosome, complete genome014650BLASTN svgBLASTP svg
NC_007606:38427083842708386376421057Shigella dysenteriae Sd197, complete genome014600BLASTN svgBLASTP svg
NC_010473:44094924409492443038920898Escherichia coli str. K-12 substr. DH10B, complete genome013840BLASTN svgBLASTP svg
NC_000913:43074714307471432826120791Escherichia coli K12, complete genome013840BLASTN svgBLASTP svg
CP002516:44312354431235445210920875Escherichia coli KO11, complete genome013840BLASTN svgBLASTP svg
AC_000091:43131674313167433668223516Escherichia coli W3110 DNA, complete genome013840BLASTN svgBLASTP svg
NC_002655:51948045194804521379718994Escherichia coli O157:H7 EDL933, complete genome013520BLASTN svgBLASTP svg
NC_002695:51648195164819518468719869Escherichia coli O157:H7 str. Sakai, complete genome013520BLASTN svgBLASTP svg
NC_007613:41568414156841418149124651Shigella boydii Sb227, complete genome012030BLASTN svgBLASTP svg
NC_010498:46567164656716467519018475Escherichia coli SMS-3-5, complete genome011550BLASTN svgBLASTP svg
NC_021066:3703725*3703725372609922375Raoultella ornithinolytica B6, complete genome0791BLASTN svgBLASTP svg
NC_020064:1854589*1854589187841223824Serratia marcescens FGI94, complete genome3e-80307BLASTN svgBLASTP svg
NC_015566:1941407*1941407196269221286Serratia sp. AS12 chromosome, complete genome6e-44186BLASTN svgBLASTP svg
NC_020064:41255004125500414419318694Serratia marcescens FGI94, complete genome4e-39170BLASTN svgBLASTP svg
NC_014562:19350881935088195391418827Pantoea vagans C9-1 chromosome, complete genome4e-33151BLASTN svgBLASTP svg
NC_010694:63654*636548609922446Erwinia tasmaniensis, complete genome6e-32147BLASTN svgBLASTP svg
NC_014118:13311641331164135459923436Burkholderia sp. CCGE1002 chromosome chromosome 2, complete9e-31143BLASTN svgBLASTP svg
NC_013592:14650151465015148872023706Dickeya dadantii Ech586, complete genome3e-24121BLASTN svgBLASTP svg
NC_013961:73037*7303710749134455Erwinia amylovora, complete genome5e-20107BLASTN svgBLASTP svg
NC_008786:32917003291700331510623407Verminephrobacter eiseniae EF01-2, complete genome2e-19105BLASTN svgBLASTP svg
NC_012779:2755338*2755338278000524668Edwardsiella ictaluri 93-146, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_007712:31630003163000318759924600Sodalis glossinidius str. 'morsitans', complete genome1e-1799.6BLASTN svgBLASTP svg
NC_013592:1056500*1056500108285526356Dickeya dadantii Ech586, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_012880:3421500*3421500345764636147Dickeya dadantii Ech703, complete genome1e-1489.7BLASTN svgBLASTP svg
AC_000091:144577*14457716459920023Escherichia coli W3110 DNA, complete genome2e-1385.7BLASTN svgBLASTP svg
AP010958:143358*14335816609922742Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-1385.7BLASTN svgBLASTP svg
CP002185:146389*14638916862022232Escherichia coli W, complete genome2e-1385.7BLASTN svgBLASTP svg
CU928145:143755*14375516736523611Escherichia coli 55989 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_000913:144577*14457716459920023Escherichia coli K12, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_009801:143426*14342616609922674Escherichia coli E24377A, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_011748:143755*14375516736523611Escherichia coli 55989, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007606:37551553755155377834323189Shigella dysenteriae Sd197, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_002695:46789454678945470459925655Escherichia coli O157:H7 str. Sakai, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_002655:47479264747926477356525640Escherichia coli O157:H7 EDL933, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_020063:2785652*2785652280843522784Enterobacteriaceae bacterium strain FGI 57, complete genome3e-1281.8BLASTN svgBLASTP svg
CU928160:4570498*4570498461509944602Escherichia coli IAI1 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_008258:4345400*4345400436989824499Shigella flexneri 5 str. 8401, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_010498:4821519*4821519484497023452Escherichia coli SMS-3-5, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015740:15943761594376161634721972Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-1075.8BLASTN svgBLASTP svg
NC_014841:13130813130815514123834Pantoea sp. At-9b plasmid pPAT9B04, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_020063:33525163352516337629223777Enterobacteriaceae bacterium strain FGI 57, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_000913:45282784528278455238424107Escherichia coli K12, complete genome1e-0869.9BLASTN svgBLASTP svg
CU928160:2818750*2818750284490226153Escherichia coli IAI1 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
CP002516:41991334199133422817229040Escherichia coli KO11, complete genome1e-0869.9BLASTN svgBLASTP svg
CP002185:47918114791811481779025980Escherichia coli W, complete genome1e-0869.9BLASTN svgBLASTP svg
AC_000091:45349354534935455904124107Escherichia coli W3110 DNA, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004337:4374500*4374500439909924600Shigella flexneri 2a str. 301, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004431:51233255123325514909025766Escherichia coli CFT073, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_004741:4364235*4364235438964325409Shigella flexneri 2a str. 2457T, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007384:2933625*2933625295770924085Shigella sonnei Ss046, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007613:44030704403070442929526226Shigella boydii Sb227, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011750:49780004978000500028022281Escherichia coli IAI39 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_020063:24809832480983250703626054Enterobacteriaceae bacterium strain FGI 57, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008544:81873081873084078622057Burkholderia cenocepacia HI2424 chromosome 3, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_011901:24663602466360251915552796Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete4e-0867.9BLASTN svgBLASTP svg
NC_015968:511282*51128254179030509Enterobacter asburiae LF7a chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014973:3290545*3290545331870328159Geobacter sp. M18 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014151:10337361033736105609922364Cellulomonas flavigena DSM 20109 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012997:59407594078341424008Teredinibacter turnerae T7901, complete genome2e-0765.9BLASTN svgBLASTP svg
AC_000091:27332527332530179728473Escherichia coli W3110 DNA, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_000913:27207127207130179729727Escherichia coli K12, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_008563:21822702182270221156429295Escherichia coli APEC O1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010473:24742924742927209924671Escherichia coli str. K-12 substr. DH10B, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_012856:112296322963Ralstonia pickettii 12D chromosome 1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014960:115614*11561413836022747Anaerolinea thermophila UNI-1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_019973:1731626*1731626176479533170Mesorhizobium australicum WSM2073, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_020181:1653261*1653261168347330213Enterobacter aerogenes EA1509E, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_010498:49306494930649495591925271Escherichia coli SMS-3-5, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011750:35840003584000361674032741Escherichia coli IAI39 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012912:41674294167429418510117673Dickeya zeae Ech1591, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015677:14600001460000148235222353Ramlibacter tataouinensis TTB310 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_016048:1930089*1930089196890738819Oscillibacter valericigenes Sjm18-20, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008570:30132633013263304329130029Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome3e-0661.9BLASTN svgBLASTP svg