Pre_GI: BLASTN Hits

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Query: NC_008463:5246954 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 5246954, End: 5306710, Length: 59757

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002516:1031386*1031386109196460579Pseudomonas aeruginosa PAO1, complete genome04831BLASTN svgBLASTP svg
NC_010501:30000300007042840429Pseudomonas putida W619, complete genome03017BLASTN svgBLASTP svg
NC_002947:61525006152500618549933000Pseudomonas putida KT2440, complete genome02878BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome02876BLASTN svgBLASTP svg
NC_002947:4484824*4484824451609931276Pseudomonas putida KT2440, complete genome02847BLASTN svgBLASTP svg
NC_004129:53738865373886545259978714Pseudomonas fluorescens Pf-5, complete genome01277BLASTN svgBLASTP svg
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome01140BLASTN svgBLASTP svg
NC_015379:90890490890497110662203Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,0922BLASTN svgBLASTP svg
NC_015379:25750002575000259943424435Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,0922BLASTN svgBLASTP svg
NC_012660:57932005793200583260939410Pseudomonas fluorescens SBW25 chromosome, complete genome0791BLASTN svgBLASTP svg
NC_015556:11885001188500122602637527Pseudomonas fulva 12-X chromosome, complete genome0747BLASTN svgBLASTP svg
NC_012660:2045398*2045398210849663099Pseudomonas fluorescens SBW25 chromosome, complete genome4e-180640BLASTN svgBLASTP svg
NC_012660:26849812684981271787932899Pseudomonas fluorescens SBW25 chromosome, complete genome5e-158567BLASTN svgBLASTP svg
NC_007005:5500196*5500196552713626941Pseudomonas syringae pv. syringae B728a, complete genome2e-151545BLASTN svgBLASTP svg
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome4e-143517BLASTN svgBLASTP svg
NC_007005:16368751636875167981442940Pseudomonas syringae pv. syringae B728a, complete genome1e-124456BLASTN svgBLASTP svg
NC_005773:1333863*1333863135559921737Pseudomonas syringae pv. phaseolicola 1448A, complete genome5e-93351BLASTN svgBLASTP svg
NC_010501:36715173671517370459933083Pseudomonas putida W619, complete genome3e-76295BLASTN svgBLASTP svg
NC_007005:830467*83046785407423608Pseudomonas syringae pv. syringae B728a, complete genome2e-68270BLASTN svgBLASTP svg
NC_005773:866157*86615792659960443Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-57232BLASTN svgBLASTP svg
NC_020209:19495001949500197652927030Pseudomonas poae RE*1-1-14, complete genome2e-55226BLASTN svgBLASTP svg
NC_002947:41675004167500424373376234Pseudomonas putida KT2440, complete genome2e-43186BLASTN svgBLASTP svg
NC_010002:45448184544818456374018923Delftia acidovorans SPH-1, complete genome3e-42182BLASTN svgBLASTP svg
NC_010170:4533416*4533416456674433329Bordetella petrii, complete genome3e-42182BLASTN svgBLASTP svg
NC_020209:39737639737645309955724Pseudomonas poae RE*1-1-14, complete genome1e-41180BLASTN svgBLASTP svg
NC_009138:1974935*1974935203606461130Herminiimonas arsenicoxydans, complete genome3e-36163BLASTN svgBLASTP svg
NC_018691:1322389*1322389134428821900Alcanivorax dieselolei B5 chromosome, complete genome1e-32151BLASTN svgBLASTP svg
NC_018691:18227311822731185319130461Alcanivorax dieselolei B5 chromosome, complete genome1e-32151BLASTN svgBLASTP svg
NC_018691:3525430*3525430358162756198Alcanivorax dieselolei B5 chromosome, complete genome1e-32151BLASTN svgBLASTP svg
NC_008782:14831551483155150744824294Acidovorax sp. JS42, complete genome6e-31145BLASTN svgBLASTP svg
NC_008782:2326439*2326439236857442136Acidovorax sp. JS42, complete genome9e-30141BLASTN svgBLASTP svg
NC_010170:1498253*1498253154638148129Bordetella petrii, complete genome4e-29139BLASTN svgBLASTP svg
NC_008825:2525380*2525380255303327654Methylibium petroleiphilum PM1, complete genome1e-28137BLASTN svgBLASTP svg
NC_015733:59098215909821595513745317Pseudomonas putida S16 chromosome, complete genome2e-27133BLASTN svgBLASTP svg
NC_011662:10587941058794107763818845Thauera sp. MZ1T, complete genome9e-27131BLASTN svgBLASTP svg
NC_008752:58588458588461104025157Acidovorax avenae subsp. citrulli AAC00-1, complete genome2e-24123BLASTN svgBLASTP svg
NC_015379:46303674630367466559935233Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-22115BLASTN svgBLASTP svg
NC_007005:17054061705406172883623431Pseudomonas syringae pv. syringae B728a, complete genome2e-21113BLASTN svgBLASTP svg
NC_008752:29369332936933297832941397Acidovorax avenae subsp. citrulli AAC00-1, complete genome8e-21111BLASTN svgBLASTP svg
NC_010688:2781624*2781624283409952476Xanthomonas campestris pv. campestris, complete genome2e-18103BLASTN svgBLASTP svg
NC_011770:4763506*4763506478993126426Pseudomonas aeruginosa LESB58, complete genome2e-18103BLASTN svgBLASTP svg
NC_020209:47504*4750412622978726Pseudomonas poae RE*1-1-14, complete genome2e-18103BLASTN svgBLASTP svg
NC_018691:22545662254566228373829173Alcanivorax dieselolei B5 chromosome, complete genome8e-18101BLASTN svgBLASTP svg
NC_009439:860571*86057188549124921Pseudomonas mendocina ymp, complete genome8e-18101BLASTN svgBLASTP svg
NC_004129:5481629*5481629550572324095Pseudomonas fluorescens Pf-5, complete genome3e-1799.6BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_015458:2614108*2614108264388729780Pusillimonas sp. T7-7 chromosome, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_015556:4074367*4074367410534530979Pseudomonas fulva 12-X chromosome, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_007908:33639023363902338735723456Rhodoferax ferrireducens T118, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_007908:12521891252189127831426126Rhodoferax ferrireducens T118, complete genome5e-1695.6BLASTN svgBLASTP svg
NC_004578:63347356334735636397929245Pseudomonas syringae pv. tomato str. DC3000, complete genome8e-1591.7BLASTN svgBLASTP svg
NC_004578:4465247*4465247448346018214Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_004578:895019*89501992169226674Pseudomonas syringae pv. tomato str. DC3000, complete genome3e-1489.7BLASTN svgBLASTP svg
NC_012691:2614603*26146032727599112997Tolumonas auensis DSM 9187, complete genome5e-1385.7BLASTN svgBLASTP svg
NC_013421:17807221780722180552624805Pectobacterium wasabiae WPP163, complete genome3e-1179.8BLASTN svgBLASTP svg
NC_014972:2089003*2089003210762418622Desulfobulbus propionicus DSM 2032 chromosome, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_007005:3414579*3414579344125226674Pseudomonas syringae pv. syringae B728a, complete genome5e-1075.8BLASTN svgBLASTP svg
NC_010512:10155571015557104522129665Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence5e-1075.8BLASTN svgBLASTP svg
NC_015379:2417312*2417312246459947288Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,5e-1075.8BLASTN svgBLASTP svg
NC_006370:768745*76874579247423730Photobacterium profundum SS9 chromosome 1, complete sequence2e-0973.8BLASTN svgBLASTP svg
NC_009648:838000*83800086209024091Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_011184:2723000*2723000274162818629Vibrio fischeri MJ11 chromosome I, complete sequence2e-0973.8BLASTN svgBLASTP svg
NC_011184:2840713*2840713285859917887Vibrio fischeri MJ11 chromosome I, complete sequence2e-0973.8BLASTN svgBLASTP svg
NC_011186:515214*51521454656031347Vibrio fischeri MJ11 chromosome II, complete sequence2e-0973.8BLASTN svgBLASTP svg
NC_013457:979102*97910299831619215Vibrio sp. Ex25 chromosome 2, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_003197:815964*81596483952123558Salmonella typhimurium LT2, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_006905:848000*84800086575317754Salmonella enterica subsp. enterica serovar Choleraesuis str7e-0971.9BLASTN svgBLASTP svg
NC_010102:2287934*2287934231106023127Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,7e-0971.9BLASTN svgBLASTP svg
NC_010694:2565580*2565580259415428575Erwinia tasmaniensis, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_011080:819103*81910384387224770Salmonella enterica subsp. enterica serovar Newport str. SL254,7e-0971.9BLASTN svgBLASTP svg
NC_011083:862901*86290188778924889Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,7e-0971.9BLASTN svgBLASTP svg
NC_011149:779903*77990380318023278Salmonella enterica subsp. enterica serovar Agona str. SL483,7e-0971.9BLASTN svgBLASTP svg
NC_012214:2673058*2673058270161428557Erwinia pyrifoliae Ep1/96, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_012912:1200000*1200000122694026941Dickeya zeae Ech1591, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_012912:48339048339052576442375Dickeya zeae Ech1591, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_013961:1246454*1246454127639829945Erwinia amylovora, complete genome7e-0971.9BLASTN svgBLASTP svg
NC_002516:1236644*1236644126316626523Pseudomonas aeruginosa PAO1, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_011770:45915004591500460979518296Pseudomonas aeruginosa LESB58, complete genome3e-0869.9BLASTN svgBLASTP svg
NC_012660:4734363*4734363475525820896Pseudomonas fluorescens SBW25 chromosome, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_010170:11032241103224112440821185Bordetella petrii, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_009512:32825003282500331588733388Pseudomonas putida F1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_007086:24770402477040251517738138Xanthomonas campestris pv. campestris str. 8004, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_007292:623765*62376565772633962Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_014910:1591003*1591003161459423592Alicycliphilus denitrificans BC chromosome, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_014910:19125521912552193924626695Alicycliphilus denitrificans BC chromosome, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_015422:28582282858228292680368576Alicycliphilus denitrificans K601 chromosome, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_015422:3184823*3184823320638321561Alicycliphilus denitrificans K601 chromosome, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_011992:1234610*1234610125759922990Acidovorax ebreus TPSY, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_007973:2150962*2150962217292621965Ralstonia metallidurans CH34 chromosome 1, complete sequence2e-0663.9BLASTN svgBLASTP svg
NC_010524:3094303*3094303311453120229Leptothrix cholodnii SP-6, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_010170:44630004463000451176948770Bordetella petrii, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_008782:15100001510000154094730948Acidovorax sp. JS42, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_008344:49039*4903913459985561Nitrosomonas eutropha C91, complete genome7e-0661.9BLASTN svgBLASTP svg
NC_002947:737924*73792476633928416Pseudomonas putida KT2440, complete genome7e-0661.9BLASTN svgBLASTP svg