Pre_GI: BLASTP Hits

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Query: NC_017249:60216:70606 Bradyrhizobium japonicum USDA 6, complete genome

Start: 70606, End: 70767, Length: 162

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004463:60225:706157061570776162Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein6e-22102
NC_014217:2987450:298818529881852988349165Starkeya novella DSM 506 chromosome, complete genomehypothetical protein5e-1993.2
NC_009720:3281000:328670932867093287029321Xanthobacter autotrophicus Py2, complete genomeDNA repair protein RadC6e-1992.8
NC_009485:7827782:784160278416027841766165Bradyrhizobium sp. BTAi1 chromosome, complete genome3e-1890.1
NC_009937:4768500:479176947917694792473705Azorhizobium caulinodans ORS 571, complete genomeDNA repair protein6e-1889.4
NC_011894:7563668:759999675999967600724729Methylobacterium nodulans ORS 2060, complete genomeDNA repair protein RadC7e-1785.9
NC_002696:2941644:295898729589872959157171Caulobacter crescentus CB15, complete genome3e-1270.5
NC_011916:2967624:298496729849672985137171Caulobacter crescentus NA1000 chromosome, complete genomeDNA repair protein RadC3e-1270.5
NC_016026:1760856:177654417765441777260717Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeDNA repair RadC family protein4e-1167
NC_010338:4148667:416180341618034161964162Caulobacter sp. K31, complete genomeDNA repair protein RadC5e-1166.2
NC_009052:4168776:418616841861684186611444Shewanella baltica OS155, complete genomeDNA repair protein RadC8e-1165.9
NC_011296:1151346:115977911597791160447669Thermodesulfovibrio yellowstonii DSM 11347, complete genomeDNA repair protein RadC2e-1064.7
NC_014220:2037560:205614920561492056649501Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeDNA repair protein RadC2e-1064.3
NC_009633:2350892:235754423575442358242699Alkaliphilus metalliredigens QYMF chromosome, complete genomeDNA repair protein RadC7e-1062.8
NC_016584:5388500:540973654097365410419684Desulfosporosinus orientis DSM 765 chromosome, complete genomeDNA repair protein radc3e-0960.5
NC_014006:2626544:264120526412052642032828Sphingobium japonicum UT26S chromosome 1, complete genomeDNA repair protein RadC4e-0960.1
NC_012472:4255729:426419942641994264876678Bacillus cereus 03BB102, complete genomeDNA repair protein RadC5e-0959.7
NC_003997:4252000:425946542594654260142678Bacillus anthracis str. Ames, complete genomeDNA repair protein RadC5e-0959.7
NC_008609:2446246:245329824532982453798501Pelobacter propionicus DSM 2379, complete genomeDNA repair protein RadC6e-0959.7
NC_010184:4287999:429533742953374296014678Bacillus weihenstephanensis KBAB4, complete genomeDNA repair protein RadC6e-0959.7
NC_016771:4195888:420322942032294203906678Bacillus cereus NC7401, complete genomeDNA repair protein RadC6e-0959.7
NC_011969:4140000:414737041473704148047678Bacillus cereus Q1 chromosome, complete genomeDNA repair protein radc6e-0959.7
NC_011658:4243561:424944642494464250123678Bacillus cereus AH187 chromosome, complete genomeDNA repair protein RadC6e-0959.7
NC_006274:4295730:430390443039044304581678Bacillus cereus E33L, complete genomeDNA repair protein RadC5e-0959.7
NC_007530:4251773:425959242595924260269678Bacillus anthracis str. 'Ames Ancestor', complete genomeDNA repair protein RadC5e-0959.7
NC_011772:4397599:439759943975994398276678Bacillus cereus G9842, complete genomeDNA repair protein RadC5e-0959.7
NC_003909:4209385:421273742127374213414678Bacillus cereus ATCC 10987, complete genomeDNA repair protein RadC5e-0959.7
NC_017200:4267408:427244042724404273117678Bacillus thuringiensis serovar finitimus YBT-020 chromosome,hypothetical protein5e-0959.7
NC_012659:4252000:425949242594924260169678Bacillus anthracis str. A0248, complete genomeDNA repair protein RadC5e-0959.7
NC_005957:4244019:424905242490524249729678Bacillus thuringiensis serovar konkukian str. 97-27, completeDNA repair protein RadC5e-0959.7
NC_005945:4251789:425996442599644260641678Bacillus anthracis str. Sterne, complete genomeDNA repair protein RadC5e-0959.7
NC_014335:4181710:419018041901804190857678Bacillus cereus biovar anthracis str. CI chromosome, completeDNA repair protein5e-0959.7
NC_009138:1843998:186754818675481868048501Herminiimonas arsenicoxydans, complete genomeputative DNA repair protein in putative prophage region (radC-like)7e-0959.3
NC_009050:811358:838293838293838709417Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceDNA repair protein RadC8e-0959.3
NC_009253:1031799:103958010395801040275696Desulfotomaculum reducens MI-1 chromosome, complete genomeDNA repair protein RadC1e-0858.5
NC_011725:4428726:442990344299034430580678Bacillus cereus B4264 chromosome, complete genomeDNA repair protein RadC1e-0858.5
NC_014171:4317520:432015043201504320827678Bacillus thuringiensis BMB171 chromosome, complete genomeDNA repair protein radC1e-0858.5
NC_018876:2604055:262305726230572623746690Methanolobus psychrophilus R15 chromosome, complete genomeDNA repair protein RadC1e-0858.2
NC_013206:21288:460184601846461444Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446DNA repair protein RadC4e-0856.6
NC_010003:1577934:157855915785591579227669Petrotoga mobilis SJ95, complete genomeDNA repair protein RadC4e-0856.6
NC_015966:2841420:285394328539432854680738Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeDNA repair protein RadC5e-0856.6
NC_010516:3234791:325519432551943255880687Clostridium botulinum B1 str. Okra, complete genomeDNA repair protein, RadC family7e-0856.2
NC_012563:3416509:343368934336893434375687Clostridium botulinum A2 str. Kyoto, complete genomeDNA repair protein, RadC family7e-0856.2
NC_009828:469778:471177471177471854678Thermotoga lettingae TMO, complete genomeDNA repair protein RadC5e-0856.2
NC_009699:3217315:323771832377183238404687Clostridium botulinum F str. Langeland chromosome, complete genomeDNA repair protein RadC7e-0855.8
NC_014614:2643203:265763126576312658110480Clostridium sticklandii, complete genomehypothetical protein7e-0855.8
NC_011661:906583:907417907417908103687Dictyoglomus turgidum DSM 6724, complete genomeDNA repair protein RadC1e-0755.5
NC_009617:588897:591420591420592109690Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeDNA repair protein RadC1e-0755.5
NC_010730:627465:647288647288647977690Sulfurihydrogenibium sp. YO3AOP1, complete genomeDNA repair protein RadC9e-0855.5
NC_009720:813157:818131818131818343213Xanthobacter autotrophicus Py2, complete genomeDNA repair protein RadC1e-0755.1
NC_010814:243384:249940249940250431492Geobacter lovleyi SZ, complete genomeDNA repair protein RadC2e-0754.7
NC_010803:1573849:158977615897761590009234Chlorobium limicola DSM 245, complete genomeDNA repair protein RadC2e-0754.7
NC_012440:1405879:140633514063351407024690Persephonella marina EX-H1, complete genomeDNA repair protein RadC3e-0753.9
NC_015687:1377367:138293913829391383628690Clostridium acetobutylicum DSM 1731 chromosome, complete genomeDNA repair protein RadC4e-0753.5
NC_003030:1375764:138133613813361382025690Clostridium acetobutylicum ATCC 824, complete genomeDNA repair protein RadC4e-0753.5
NC_017295:1375180:138075213807521381441690Clostridium acetobutylicum EA 2018 chromosome, complete genomeDNA repair protein RadC4e-0753.5
NC_017271:3641705:368169136816913682170480Xanthomonas campestris pv. raphani 756C chromosome, completeRadC family DNA repair protein3e-0753.5
NC_010718:517473:537139537139537864726Natranaerobius thermophilus JW/NM-WN-LF, complete genomeDNA repair protein RadC4e-0753.5
NC_013216:1442044:144361114436111444294684Desulfotomaculum acetoxidans DSM 771, complete genomeDNA repair protein RadC5e-0753.1
NC_006831:1039142:105358810535881054280693Ehrlichia ruminantium str. Gardel, complete genomeDNA repair protein radC homolog6e-0752.8
NC_014328:794000:800328800328801020693Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeDNA repair protein, RadC family7e-0752.8
NC_005295:1067421:108278910827891083481693Ehrlichia ruminantium str. Welgevonden, complete genomeDNA repair protein RadC9e-0752.4
NC_006832:1051500:106150010615001062192693Ehrlichia ruminantium str. Welgevonden, complete genomeDNA repair protein radC homolog9e-0752.4
NC_016612:443398:455833455833456279447Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative DNA repair protein9e-0752.4
NC_009439:1297851:133081213308121331309498Pseudomonas mendocina ymp, complete genomeDNA repair protein RadC8e-0752.4
NC_002505:1931750:193612119361211936597477Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeDNA repair protein RadC, putative1e-0652
NC_009457:1444449:148922414892241489700477Vibrio cholerae O395 chromosome 2, complete sequenceDNA repair protein RadC1e-0652
NC_012578:1838470:188325418832541883730477Vibrio cholerae M66-2 chromosome I, complete sequenceputative DNA repair protein RadC1e-0652
NC_012582:2013515:202064320206432021119477Vibrio cholerae O395 chromosome chromosome I, complete sequenceputative DNA repair protein RadC1e-0652
NC_012668:1688500:171091017109101711386477Vibrio cholerae MJ-1236 chromosome 1, complete sequenceDNA repair protein RadC1e-0652
NC_016445:1363831:140752214075221407998477Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeDNA repair protein RadC1e-0652
NC_016944:1978058:198242919824291982905477Vibrio cholerae IEC224 chromosome I, complete sequenceDNA repair protein RadC1e-0652
NC_008609:206313:211797211797212288492Pelobacter propionicus DSM 2379, complete genomeDNA repair protein RadC1e-0652
NC_002939:2315402:238214023821402382631492Geobacter sulfurreducens PCA, complete genomeDNA repair protein RadC1e-0651.6
NC_002939:2337402:238214023821402382631492Geobacter sulfurreducens PCA, complete genomeDNA repair protein RadC1e-0651.6
NC_012918:928903:934349934349934849501Geobacter sp. M21 chromosome, complete genomeDNA repair protein RadC1e-0651.6
NC_010688:3030873:306701430670143067493480Xanthomonas campestris pv. campestris, complete genomeDNA repair protein radC homolog1e-0651.6
NC_015379:908904:956123956123956620498Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative DNA repair protein2e-0651.2
NC_019897:2645404:265060326506032651292690Thermobacillus composti KWC4 chromosome, complete genomeDNA repair protein radc2e-0651.2
NC_021184:1484352:148539614853961486004609Desulfotomaculum gibsoniae DSM 7213, complete genomeDNA repair protein radc2e-0651.2
NC_012793:3096095:312952731295273130036510Geobacillus sp. WCH70, complete genomeDNA repair protein RadC2e-0651.2
NC_012918:1697860:172058817205881721091504Geobacter sp. M21 chromosome, complete genomeDNA repair protein RadC2e-0651.2
NC_021182:2160580:216503121650312165717687Clostridium pasteurianum BC1, complete genomeDNA repair protein radc3e-0650.8
NC_015437:438538:465545465545466234690Selenomonas sputigena ATCC 35185 chromosome, complete genomeDNA repair protein RadC3e-0650.8
NC_015740:2407500:242588724258872426384498Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeDNA repair protein RadC3e-0650.8
NC_009648:4359875:435987543598754360540666Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA repair protein RadC3e-0650.8
NC_011979:646518:652380652380652628249Geobacter sp. FRC-32, complete genome3e-0650.8
NC_012731:5074000:507405450740545074719666Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeDNA repair protein RadC3e-0650.8
NC_016845:5162481:516293451629345163599666Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,DNA repair protein RadC3e-0650.8
NC_005139:2201820:227281922728192273373555Vibrio vulnificus YJ016 chromosome I, complete sequenceDNA repair protein2e-0650.8
NC_017068:1327025:134900213490021349586585Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative DNA repair protein RadC4e-0650.4
NC_017068:1327025:135238313523831352967585Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative DNA repair protein RadC3e-0650.4
NC_011283:105245:121974121974122639666Klebsiella pneumoniae 342 chromosome, complete genomeDNA repair protein RadC4e-0650.1
NC_013850:109500:127170127170127835666Klebsiella variicola At-22 chromosome, complete genomeDNA repair protein RadC4e-0650.1
NC_007103:230872:247856247856248311456Bacillus cereus E33L plasmid pE33L466, complete sequencepossible DNA repair protein4e-0650.1
NC_010322:5293652:530406853040685304556489Pseudomonas putida GB-1 chromosome, complete genomeDNA repair protein RadC6e-0649.3
NC_009706:830461:865385865385866071687Clostridium kluyveri DSM 555 chromosome, complete genomeDNA repair protein RadC9e-0648.9