Pre_GI Gene

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Host: NC_010803 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010803:1573849 Chlorobium limicola DSM 245, complete genome

Host Lineage: Chlorobium limicola; Chlorobium; Chlorobiaceae; Chlorobiales; Chlorobi; Bacteria

General Information: Isolated from Gilroy Hot Spring. The green sulfur bacteria (GSB; Phylum Chlorobi ) are commonly found in illuminated, stratified, and anoxic aquatic environments, sediments, and other sulfide-rich environments including hot springs. This bacterium has been used to model a variety of enzyme and reaction center pathways, including ATP-citrate lyase, isocitrate dehydrogenase, and the reverse Krebs cycle used in photosynthesis. Now called the "reductive carbolic acid cycle", this was found to be the sole carbon dioxide assimilation pathway in other green sulfur bacteria since its discovery.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
157233015738561527putative transcriptional regulatorQuickGO ontologyBLASTP
157384915769263078type III restriction protein res subunitQuickGO ontologyBLASTP
15773731577792420protein of unknown function DUF86QuickGO ontologyBLASTP
15777771578196420DNA polymerase beta domain protein regionQuickGO ontologyBLASTP
15782831578771489hypothetical protein
15788981579479582pentapeptide repeat proteinQuickGO ontologyBLASTP
157969915809791281HipA domain proteinQuickGO ontologyBLASTP
15810881581195108hypothetical protein
158178615847822997Miro domain proteinQuickGO ontologyBLASTP
15848181585369552TIR proteinQuickGO ontologyBLASTP
15864081586866459hypothetical protein
15868721587276405transcriptional regulator XRE familyQuickGO ontology
15872791587764486hypothetical protein
158874615897921047transposase and inactivated derivativesQuickGO ontologyBLASTP
15897761590009234DNA repair protein RadCQuickGO ontologyBLASTP
15903521591005654hypothetical proteinBLASTP
15916241592007384hypothetical protein
159368815951811494inosine-5-monophosphate dehydrogenaseQuickGO ontologyBLASTP
159529015963961107hypothetical proteinBLASTP
159644315975731131protein of unknown function DUF1615QuickGO ontologyBLASTP