Pre_GI: BLASTP Hits

Some Help

Query: NC_016830:1182765:1214383 Pseudomonas fluorescens F113 chromosome, complete genome

Start: 1214383, End: 1214769, Length: 387

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants. Furthermore a number of strains also posses the ability to suppress agricultural pathogens like fungal infections, hence their role as biocontrol (biological disease control) agents is under examination. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017154:2901300:292375729237572924143387Yersinia pestis D106004 chromosome, complete genomeNifU family protein5e-60229
NC_012559:2752825:276968627696862770075390Laribacter hongkongensis HLHK9, complete genomehypothetical protein2e-57220
NC_015850:761500:761654761654762058405Acidithiobacillus caldus SM-1 chromosome, complete genomeFe-S cluster formation/repair protein3e-57220
NC_002946:618439:622457622457622843387Neisseria gonorrhoeae FA 1090, complete genomeputative NifU-like protein6e-56215
NC_003116:1488576:150284915028491503235387Neisseria meningitidis Z2491, complete genomeNifU-like protein6e-56215
NC_011035:1033942:104974210497421050128387Neisseria gonorrhoeae NCCP11945 chromosome, complete genomescaffold protein6e-56215
NC_013016:1257942:127481712748171275203387Neisseria meningitidis alpha14 chromosome, complete genomescaffold protein6e-56215
NC_017505:1338661:135496813549681355354387Neisseria meningitidis alpha710 chromosome, complete genomescaffold protein6e-56215
NC_017511:950411:965537965537965923387Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomescaffold protein6e-56215
NC_017512:1264542:127881512788151279201387Neisseria meningitidis WUE 2594, complete genomeputative NifU-like protein6e-56215
NC_017517:1377617:139320713932071393593387Neisseria meningitidis M01-240355 chromosome, complete genomeFeS cluster assembly scaffold IscU6e-56215
NC_017516:917817:922909922909923295387Neisseria meningitidis H44/76 chromosome, complete genomeFeS cluster assembly scaffold IscU2e-55214
NC_010162:10208521:102240411022404110224490450Sorangium cellulosum 'So ce 56', complete genomeNifU-like protein4e-55213
NC_008576:3812500:382786738278673828259393Magnetococcus sp. MC-1, complete genomeFeS cluster assembly scaffold IscU3e-55213
NC_008095:6253610:625361062536106254011402Myxococcus xanthus DK 1622, complete genomeFeS cluster assembly scaffold IscU4e-55212
NC_014963:113015:137780137780138205426Terriglobus saanensis SP1PR4 chromosome, complete genomeFeS cluster assembly scaffold IscU5e-51199
NC_007797:692944:696821696821697213393Anaplasma phagocytophilum HZ, complete genomeFeS cluster assembly scaffold IscU2e-43173
NC_003366:2057656:206381720638172064245429Clostridium perfringens str. 13, complete genomeprobable nitrogen fixation protein4e-37152
NC_008262:1950205:195312119531211953555435Clostridium perfringens SM101, complete genomenifU protein4e-37152
NC_008593:1461771:147521014752101475638429Clostridium novyi NT, complete genomenifU protein3e-36150
NC_014328:1307490:131112113111211311552432Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeNifU protein4e-36149
NC_021182:2422226:243839124383912438822432Clostridium pasteurianum BC1, complete genomeFeS cluster assembly scaffold protein NifU2e-35147
NC_014392:969498:990843990843991226384Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeFeS cluster assembly scaffold protein NifU5e-35146
NC_014657:1518721:153826215382621538645384Caldicellulosiruptor owensensis OL chromosome, complete genomefes cluster assembly scaffold protein nifu4e-35146
NC_014652:1032711:105565710556571056040384Caldicellulosiruptor hydrothermalis 108 chromosome, completefes cluster assembly scaffold protein nifu3e-35146
NC_015949:1180755:119982111998211200204384Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeFeS cluster assembly scaffold protein NifU3e-35146
NC_014721:1777644:179672517967251797108384Caldicellulosiruptor kristjanssonii 177R1B chromosome, completefes cluster assembly scaffold protein nifu3e-35146
NC_014720:1161841:116302811630281163411384Caldicellulosiruptor kronotskyensis 2002 chromosome, completefes cluster assembly scaffold protein nifu3e-35146
NC_012034:1783912:180310418031041803487384Anaerocellum thermophilum DSM 6725, complete genomeFeS cluster assembly scaffold protein NifU3e-35146
NC_009437:2367842:238689723868972387280384Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeNifU domain-containing protein5e-35145
NC_011832:1949717:195155419515541951991438Candidatus Methanosphaerula palustris E1-9c, complete genomeFeS cluster assembly scaffold protein NifU5e-35145
NC_014377:1089894:110513511051351105527393Thermosediminibacter oceani DSM 16646 chromosome, complete genomeFeS cluster assembly scaffold protein NifU7e-34142
NC_010718:304440:320661320661321074414Natranaerobius thermophilus JW/NM-WN-LF, complete genomeFeS cluster assembly scaffold protein NifU2e-32137
NC_019978:1816940:183294218329421833343402Halobacteroides halobius DSM 5150, complete genomeFeS cluster assembly scaffold protein NifU8e-32135
NC_011830:3786173:380337538033753803749375Desulfitobacterium hafniense DCB-2, complete genomeFeS cluster assembly scaffold protein NifU2e-30131
NC_013790:2030960:203401020340102034384375Methanobrevibacter ruminantium M1 chromosome, complete genomeNifU-like FeS cluster assembly scaffold protein2e-30130
NC_018515:989616:996984996984997361378Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeFeS cluster assembly scaffold protein NifU5e-30129
NC_014377:532816:550491550491550862372Thermosediminibacter oceani DSM 16646 chromosome, complete genomeFeS cluster assembly scaffold protein NifU1e-28125
NC_009495:2685646:270474627047462705174429Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeiron-sulfur cluster assembly protein3e-28124
NC_009699:2733529:275270727527072753135429Clostridium botulinum F str. Langeland chromosome, complete genomeiron-sulfur cluster assembly protein3e-28123
NC_011899:948790:957256957256957672417Halothermothrix orenii H 168, complete genomenitrogen-fixing NifU domain protein4e-28123
NC_003454:677699:695293695293695679387Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeNifU protein6e-27119
NC_014840:286767:311492311492312316825Pantoea sp. At-9b plasmid pPAT9B03, complete sequenceFe-S cluster assembly protein NifU5e-26116
NC_011060:330437:350138350138350749612Pelodictyon phaeoclathratiforme BU-1, complete genomenitrogen-fixing NifU domain protein1e-23108
NC_014376:2921769:294745529474552947838384Clostridium saccharolyticum WM1 chromosome, complete genomenitrogen-fixing NifU domain protein5e-23106
NC_013771:684966:693574693574694458885Cyanobacterium UCYN-A, complete genomeFe-S cluster assembly protein NifU1e-22105
NC_020409:393329:418015418015418866852Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeNitrogen fixation protein nifU9e-23105
NC_010546:553774:564649564649565530882Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceiron-sulfur cluster assembly protein8e-23105
NC_014376:2921769:294574129457412946142402Clostridium saccharolyticum WM1 chromosome, complete genomenitrogen-fixing NifU domain protein2e-22104
NC_015577:2203835:221854422185442219137594Treponema azotonutricium ZAS-9 chromosome, complete genomeIscU protein1e-21101
NC_009455:820821:822116822116822499384Dehalococcoides sp. BAV1 chromosome, complete genomeNifU domain-containing protein9e-2095.5
NC_009715:167513:190638190638191630993Campylobacter curvus 525.92 chromosome, complete genomeNifU family protein1e-1995.1
NC_015565:287900:329903329903330388486Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completenitrogen-fixing NifU domain-containing protein1e-1995.1
NC_009802:114749:115701115701116693993Campylobacter concisus 13826, complete genomeacetolactate synthase small subunit1e-1891.7
NC_018870:2316499:237224323722432372653411Thermacetogenium phaeum DSM 12270 chromosome, complete genomeNifU-like Fe-S cluster assembly protein3e-1787
NC_016048:1390463:139478113947811395155375Oscillibacter valericigenes Sjm18-20, complete genomeputative iron-sulfur cluster assembly protein1e-1685.1
NC_011894:4066926:409174640917464092167422Methylobacterium nodulans ORS 2060, complete genome1e-1375.5
NC_013922:1855000:185849718584971858928432Natrialba magadii ATCC 43099 chromosome, complete genomeSUF system FeS assembly protein, NifU family1e-1375.5
NC_017341:903473:924327924327924791465Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,SUF system FeS assembly protein2e-1270.9
NC_015690:1109335:111419511141951114626432Paenibacillus mucilaginosus KNP414 chromosome, complete genomeNifU2e-1270.9
NC_016935:1636278:164224616422461642677432Paenibacillus mucilaginosus 3016 chromosome, complete genomeNifU family protein3e-1270.5
NC_015387:1898496:190542619054261905854429Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeSUF system FeS assembly protein, NifU family4e-1063.5
NC_010184:4763932:477346947734694773900432Bacillus weihenstephanensis KBAB4, complete genomeSUF system FeS assembly protein, NifU family5e-1063.2
NC_011969:4655602:466636046663604666791432Bacillus cereus Q1 chromosome, complete genomenifu family protein7e-1062.8
NC_011772:4875893:488521648852164885647432Bacillus cereus G9842, complete genomeiron-sulfur cluster assembly scaffold SufA7e-1062.8
NC_017190:3166000:318204631820463182489444Bacillus amyloliquefaciens LL3 chromosome, complete genomenitrogen fixation protein NifU-like protein7e-1062.8
NC_015391:448833:457117457117457581465Carnobacterium sp. 17-4 chromosome, complete genomeiron-sulfur cluster assembly scaffold protein2e-0961.6
NC_014925:578759:581326581326581775450Staphylococcus pseudintermedius HKU10-03 chromosome, completePutative iron-sulfur cluster assembly scaffold protein for SUF system, SufE25e-0959.7
NC_016932:1157587:117002811700281170477450Corynebacterium pseudotuberculosis 316 chromosome, complete genomeNifU family protein4e-0856.6
NC_013642:1425795:142579514257951426211417Thermotoga naphthophila RKU-10, complete genomeSUF system FeS assembly protein, NifU family5e-0856.6
NC_014329:1169674:118527011852701185719450Corynebacterium pseudotuberculosis FRC41 chromosome, completenifU-like protein involved in Fe-S cluster formation9e-0855.8
NC_016781:1169632:118522811852281185677450Corynebacterium pseudotuberculosis 3/99-5 chromosome, completenifU family protein9e-0855.8
NC_017301:1172660:118509611850961185545450Corynebacterium pseudotuberculosis C231 chromosome, completeNifU family protein2e-0754.3
NC_017303:1172656:118509911850991185548450Corynebacterium pseudotuberculosis I19 chromosome, complete genomeNifU family protein2e-0754.3
NC_016782:1251796:127291212729121273361450Corynebacterium diphtheriae 241 chromosome, complete genomeputative nitrogen fixation protein NifU-related protein2e-0754.3
NC_016783:1274000:129720912972091297658450Corynebacterium diphtheriae INCA 402 chromosome, complete genomeputative nitrogen fixation protein NifU-related protein2e-0754.3
NC_016785:1233384:125449912544991254948450Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeputative nitrogen fixation protein NifU-related protein2e-0754.3
NC_016786:1251765:127288112728811273330450Corynebacterium diphtheriae HC01 chromosome, complete genomeputative nitrogen fixation protein NifU-related protein2e-0754.3
NC_016787:1240000:126233112623311262780450Corynebacterium diphtheriae HC03 chromosome, complete genomeputative nitrogen fixation protein NifU-related protein2e-0754.3
NC_016788:1214026:127232112723211272770450Corynebacterium diphtheriae HC04 chromosome, complete genomeputative nitrogen fixation protein NifU-related protein2e-0754.3
NC_016790:1218596:123971012397101240159450Corynebacterium diphtheriae VA01 chromosome, complete genomeputative nitrogen fixation protein NifU-related protein2e-0754.3
NC_016800:1243000:130147913014791301928450Corynebacterium diphtheriae BH8 chromosome, complete genomeputative nitrogen fixation protein NifU-related protein2e-0754.3
NC_016802:1256287:127381312738131274262450Corynebacterium diphtheriae HC02 chromosome, complete genomeputative nitrogen fixation protein NifU-related protein2e-0754.3
NC_002935:1237585:129922212992221299671450Corynebacterium diphtheriae NCTC 13129, complete genomePutative nitrogen fixation protein NifU-related protein2e-0754.3
NC_016801:1255611:131804313180431318492450Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeputative nitrogen fixation protein NifU-related protein6e-0753.1
NC_016799:1268706:132836613283661328815450Corynebacterium diphtheriae 31A chromosome, complete genomeputative nitrogen fixation protein NifU-related protein5e-0753.1
NC_016789:1295918:131702813170281317477450Corynebacterium diphtheriae PW8 chromosome, complete genomeputative nitrogen fixation protein NifU-related protein5e-0753.1
NC_002570:388000:397887397887398336450Bacillus halodurans C-125, complete genomenitrogen fixation protein9e-0752.4
NC_020995:477765:480324480324480818495Enterococcus casseliflavus EC20, complete genomeNifU family SUF system FeS assembly protein9e-0752.4
NC_008786:3323167:334054133405413340933393Verminephrobacter eiseniae EF01-2, complete genomenitrogen-fixing NifU domain protein2e-0651.6
NC_017031:1172644:118515411851541185534381Corynebacterium pseudotuberculosis P54B96 chromosome, completeNifU family protein2e-0651.2
NC_016077:388941:403300403300403755456Acidaminococcus intestini RyC-MR95 chromosome, complete genomehypothetical protein2e-0651.2
NC_014935:711765:754261754261754740480Nitratifractor saLSUginis DSM 16511 chromosome, complete genomenitrogen-fixing nifu domain protein4e-0650.1
NC_013192:519600:529664529664530104441Leptotrichia buccalis DSM 1135, complete genomeSUF system FeS assembly protein, NifU family6e-0649.7