Pre_GI: BLASTP Hits

Some Help

Query: NC_016445:1027143:1027143 Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, complete

Start: 1027143, End: 1040744, Length: 13602

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae O1 str. 2010EL-1786 (ATCC BAA-2163) is a 2010 outbreak strain of Vibrio cholerae from Haiti. Isolated from stool sample from patient with cholera.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016944:1547176:15471761547176156081313638Vibrio cholerae IEC224 chromosome I, complete sequenceRTX toxin RtxA08962
NC_002505:1550108:15501081550108156378413677Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completeRTX toxin RtxA08952
NC_012962:3499900:34999003499900351018910290Photorhabdus asymbiotica, complete genomeSimilar to RTX toxin RtxA02438
NC_012962:3499900:35481233548123355871510593Photorhabdus asymbiotica, complete genomeSimilar to RTX toxin RtxA01943
NC_015224:1514747:1526945152694515310934149Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative cytotoxin RtxA01090
NC_002505:1507860:1510278151027815137693492Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completevgrG protein3e-161572
NC_012578:1465302:1467720146772014712113492Vibrio cholerae M66-2 chromosome I, complete sequencevgrG protein3e-161572
NC_012668:2115228:2130302213030221337933492Vibrio cholerae MJ-1236 chromosome 1, complete sequenceVgrG protein3e-161572
NC_016445:984856:9872739872739907643492Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetype VI secretion system secreted protein VgrG3e-161572
NC_016944:1504888:1507306150730615107973492Vibrio cholerae IEC224 chromosome I, complete sequencetype VI secretion system secreted protein VgrG3e-161572
NC_009457:1068000:1068747106874710720343288Vibrio cholerae O395 chromosome 2, complete sequencevgrG protein3e-145518
NC_005126:1549066:155379315537931554782990Photorhabdus luminescens subsp. laumondii TTO1, complete genome6e-95352
NC_012751:1538500:1549965154996515539123948Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeputative RTX-family protein-212e-28130
NC_009708:986918:99513299513210044469315Yersinia pseudotuberculosis IP 31758 chromosome, complete genomephage minor structural protein7e-23112
NC_012751:1071589:1075689107568910799784290Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completeputative RTX-family protein-102e-22111
NC_003143:1033500:1037479103747910468119333Yersinia pestis CO92, complete genomeputative virulence determinant5e-22109
NC_008150:361224:3713313713313806639333Yersinia pestis Antiqua, complete genomeputative virulence determinant5e-22109
NC_008149:3529428:3533384353338435427169333Yersinia pestis Nepal516, complete genomevirulence determinant5e-22109
NC_004088:3661601:3665557366555736748899333Yersinia pestis KIM, complete genomehypothetical protein5e-22109
NC_009381:627685:6356696356696450019333Yersinia pestis Pestoides F chromosome, complete genomevirulence determinant5e-22109
NC_010159:138879:1441581441581534729315Yersinia pestis Angola, complete genomeputative phage minor structural protein5e-22109
NC_014029:1001000:1009046100904610183789333Yersinia pestis Z176003 chromosome, complete genomeputative virulence determinant5e-22109
NC_017160:945176:9531659531659624979333Yersinia pestis D182038 chromosome, complete genomeputative virulence determinant5e-22109
NC_017168:50391:5846358463677959333Yersinia pestis A1122 chromosome, complete genomeputative virulence determinant5e-22109
NC_017265:854492:8624778624778718099333Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative virulence determinant5e-22109
NC_005810:3964468:3972453397245339817859333Yersinia pestis biovar Microtus str. 91001, complete genomeputative virulence determinant5e-22109
NC_017154:941065:9512089512089605229315Yersinia pestis D106004 chromosome, complete genomevirulence determinant5e-22109
NC_010634:3692321:3696277369627737056099333Yersinia pseudotuberculosis PB1/+, complete genomepore forming RTX toxin family protein5e-22109
NC_006155:3779381:3783316378331637926279312Yersinia pseudotuberculosis IP 32953, complete genomepore forming RTX toxin family protein4e-22109
NC_010465:933488:9415759415759509079333Yersinia pseudotuberculosis YPIII, complete genomevirulence determinant7e-22108
NC_016935:3819500:3833626383362638350111386Paenibacillus mucilaginosus 3016 chromosome, complete genomeRTX toxins and-related Ca2+-binding protein2e-1070.9
NC_015690:3269000:3283186328318632845711386Paenibacillus mucilaginosus KNP414 chromosome, complete genomeRTX toxins and related Ca2+-binding protein6e-1069.3
NC_014311:804157:8142878142878231158829Ralstonia solanacearum PSI07 chromosome, complete genomemetalloprotease, Hemolysin-type calcium-binding region3e-0967
NC_010803:2067539:20675392067539208054313005Chlorobium limicola DSM 245, complete genomeHemolysin-type calcium-binding region4e-0966.6
NC_016935:2460795:2480053248005324814591407Paenibacillus mucilaginosus 3016 chromosome, complete genomehemolysin-type calcium-binding protein6e-0759.3
NC_015690:1929599:1948842194884219502481407Paenibacillus mucilaginosus KNP414 chromosome, complete genomehemolysin-type calcium-binding region protein6e-0759.3
NC_015380:412277:413200413200413910711Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomehypothetical protein2e-0657.8
NC_009482:822716:8305498305498325492001Synechococcus sp. RCC307 chromosome, complete genomehypothetical protein3e-0657
NC_014006:3124818:31543073154307316678612480Sphingobium japonicum UT26S chromosome 1, complete genomeputative Ca2+-binding hemolysin7e-0655.8