Pre_GI: BLASTP Hits

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Query: NC_015848:3343731:3365289 Mycobacterium canettii CIPT 140010059, complete genome

Start: 3365289, End: 3366020, Length: 732

Host Lineage: Mycobacterium canettii; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: The Republic of Djibouti, Africa appears to be an exceptional place in terms of tuberculosis (TB) caused by Mycobacterium canettii, a highly unusual tubercle bacillus with unusual smooth colony morphology (STB) related to the M. tuberculosis complex (MTBC). M. canettii was first isolated from a 20-year-old French farmer suffering from pulmonary tuberculosis by G. Canetti in 1969. Since then, this strain has been isolated on rare occasions from patients who lived or were presumably infected in East Africa. It tends to preferentially affect children and foreigners in the Horn of Africa. M. canettii, a possible ancestor of the MTBC, is found almost exclusively in the Horn of Africa where TB is thought to have emerged about 40 000 years ago, coinciding with the expansion of human population out of Africa. The geographical restriction of M. canettii isolates and contrasting genetic diversity are characteristics compatible with a non-human reservoir. With the larger pan-genome reflecting the ancestral, wider gene pool of tubercle bacilli, their lower virulence and faster growth, especially at temperatures below 37 degrees C, plausibly reflecting broader environmental adaptability, STB strains might thus come nearer to the as-yet-unknown missing link between the obligate pathogen M. tuberculosis and environmental mycobacteria (adapted from PMIDs 20831613 and 23291586). Mycobacteria have an unusual outer membrane approximately 8nm thick, despite being considered Gram-positive. The outer membrane and the mycolic acid-arabinoglactan-peptidoglycan polymer form the cell wall, which constitutes an efficient permeability barrier in conjunction with the cell inner membrane.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017026:3282405:330261333026133303344732Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein3e-141500
NC_002755:3282785:330298833029883303719732Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein3e-141500
NC_009525:3300456:332066033206603321391732Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein3e-141500
NC_019950:3306419:332959833295983330329732Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein3e-141500
NC_000962:3288464:330866833086683309399732Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein3e-141500
NC_009565:3299937:332014133201413320872732Mycobacterium tuberculosis F11, complete genomehypothetical protein3e-141500
NC_008769:3242453:326282932628293263560732Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomehypothetical protein1e-140498
NC_002945:3246278:326535632653563266087732Mycobacterium bovis AF2122/97, complete genomehypothetical protein1e-140498
NC_012207:3237440:325565632556563256387732Mycobacterium bovis BCG str. Tokyo 172, complete genomehypothetical protein1e-140498
NC_016804:3221818:324219432421943242925732Mycobacterium bovis BCG str. Mexico chromosome, complete genomehypothetical protein1e-140498
NC_016604:297687:314531314531315271741Mycobacterium rhodesiae NBB3 chromosome, complete genomeFkbM family methyltransferase5e-95347
NC_009565:1688642:170969517096951710426732Mycobacterium tuberculosis F11, complete genomehypothetical protein1e-92339
NC_002755:1684161:170521317052131705944732Mycobacterium tuberculosis CDC1551, complete genomehypothetical protein1e-92339
NC_000962:1684005:170505817050581705789732Mycobacterium tuberculosis H37Rv, complete genomehypothetical protein1e-92339
NC_009525:1685522:170657517065751707306732Mycobacterium tuberculosis H37Ra, complete genomehypothetical protein1e-92339
NC_012943:2707677:270767727076772708408732Mycobacterium tuberculosis KZN 1435 chromosome, complete genomehypothetical protein1e-92339
NC_016768:2704350:270435027043502705081732Mycobacterium tuberculosis KZN 4207 chromosome, complete genomehypothetical protein1e-92339
NC_017026:1686500:170609317060931706824732Mycobacterium tuberculosis RGTB327 chromosome, complete genomehypothetical protein1e-92339
NC_015848:1708176:172923317292331729967735Mycobacterium canettii CIPT 140010059, complete genomehypothetical protein1e-91335
NC_019950:1689910:170981817098181710552735Mycobacterium canettii CIPT 140060008 complete genomehypothetical protein1e-91335
NC_002944:1285436:129571912957191296441723Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein8e-91333
NC_016948:3381848:340316534031653403590426Mycobacterium intracellulare MOTT-64 chromosome, complete genomehypothetical protein2e-58225
NC_016947:3309898:333122333312233331606384Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein3e-51201
NC_015572:1252000:129141412914141292145732Methylomonas methanica MC09 chromosome, complete genomemethyltransferase FkbM family1e-49196
NC_007484:1671835:168403416840341684747714Nitrosococcus oceani ATCC 19707, complete genomeMethyltransferase FkbM2e-2099.4
NC_010475:1161000:117416311741631174906744Synechococcus sp. PCC 7002, complete genomemethyltransferase, FkbM family protein1e-1893.6
NC_011901:2202690:222057222205722221300729Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completemethyltransferase FkbM9e-1684
NC_011901:2202690:223037822303782231085708Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein8e-1684
NC_002977:1198438:121289712128971213658762Methylococcus capsulatus str. Bath, complete genomemethyltransferase, FkbM family4e-1478.6
NC_008146:1016446:103992010399201040783864Mycobacterium sp. MCS, complete genomeMethyltransferase FkbM6e-1477.8
NC_008705:1022252:104565410456541046427774Mycobacterium sp. KMS, complete genomemethyltransferase FkbM family7e-1477.4
NC_011979:1590432:162393916239391624676738Geobacter sp. FRC-32, complete genomemethyltransferase FkbM family3e-1168.9
NC_014006:2999500:3008749300874930103171569Sphingobium japonicum UT26S chromosome 1, complete genomeputative methyltransferase1e-0860.5
NC_011666:3001513:3004912300491230059971086Methylocella silvestris BL2, complete genomemethyltransferase FkbM family6e-0858.2
NC_013743:3020687:303259730325973033412816Haloterrigena turkmenica DSM 5511, complete genomemethyltransferase FkbM family5e-0858.2
NC_000914:135534:151051151051151782732Rhizobium sp. NGR234 plasmid pNGR234a, complete sequenceNoeI1e-0757
NC_007761:781210:807701807701808561861Rhizobium etli CFN 42, complete genomelipolysaccharide tri-O-methyl-fucosylation protein (SAM-dependent methyltransferase protein)4e-0755.1
NC_015377:34445:478014780148601801Burkholderia gladioli BSR3 plasmid bgla_2p, complete sequencemethyltransferase FkbM family5e-0754.7
NC_017904:3415700:343988934398893440575687Mycobacterium sp. MOTT36Y chromosome, complete genomeFkbM family methyltransferase8e-0754.3
NC_008536:5861495:587940658794065880119714Solibacter usitatus Ellin6076, complete genomemethyltransferase FkbM family7e-0754.3
NC_015496:2279829:230194423019442302819876Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomemethyltransferase FkbM family1e-0653.9
NC_005027:1304887:130488713048871305777891Rhodopirellula baltica SH 1, complete genomeconserved hypothetical protein-putative methyltransferase1e-0653.9
NC_000911:2777447:2781403278140327844473045Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-0653.5
NC_017039:2775275:2779231277923127822753045Synechocystis sp. PCC 6803 substr. PCC-P, complete genomehypothetical protein1e-0653.5
NC_017052:2775263:2779219277921927822633045Synechocystis sp. PCC 6803 substr. PCC-N, complete genomehypothetical protein1e-0653.5
NC_017277:2776264:2780220278022027832643045Synechocystis sp. PCC 6803, complete genomehypothetical protein1e-0653.5
NC_007508:2277640:228465422846542285406753Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein3e-0652.4
NC_017904:3415700:344221034422103442857648Mycobacterium sp. MOTT36Y chromosome, complete genomeFkbM family methyltransferase5e-0651.6
NC_002971:619355:6247286247286259901263Coxiella burnetii RSA 493, complete genomemethyltransferase, FkbM family8e-0650.8
NC_009727:670616:6734776734776746641188Coxiella burnetii Dugway 7E9-12, complete genomemethyltransferase, FkbM family9e-0650.8
NC_011527:1255998:1284971128497112862841314Coxiella burnetii CbuG_Q212, complete genomehypothetical protein9e-0650.8
NC_010117:700112:7054857054857066721188Coxiella burnetii RSA 331, complete genomemethyltransferase, FkbM family9e-0650.8