Pre_GI: BLASTP Hits

Some Help

Query: NC_014931:6203872:6228445 Variovorax paradoxus EPS chromosome, complete genome

Start: 6228445, End: 6229707, Length: 1263

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Environment: Soil; Temp: Mesophile. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008781:2575213:259464525946452595349705Polaromonas naphthalenivorans CJ2, complete genome2e-55216
NC_016147:3023180:3028866302886630300291164Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeFis family transcriptional regulator3e-24113
NC_010682:288415:3041113041113061742064Ralstonia pickettii 12J chromosome 1, complete sequenceGAF modulated sigma54 specific transcriptional regulator, Fis family5e-22105
NC_008782:1917634:1920037192003719220402004Acidovorax sp. JS42, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family3e-21103
NC_010512:110932:1109321109321121131182Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencetranscriptional regulator, Fis family8e-1891.7
NC_007492:3384077:3415294341529434171741881Pseudomonas fluorescens PfO-1, complete genomePossible Transcriptional Regulator, Fis family2e-1790.5
NC_018643:1309804:1324444132444413255321089Alpha proteobacterium HIMB5 chromosome, complete genomeDNA-binding protein with resolvase-like helix-turn-helix domain protein2e-1687
NC_012563:2203037:2209814220981422117091896Clostridium botulinum A2 str. Kyoto, complete genomeaor transcriptional regulator9e-1685.1
NC_009495:2056546:2063323206332320652181896Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeaor transcriptional regulator9e-1685.1
NC_009697:1985187:1991964199196419938591896Clostridium botulinum A str. ATCC 19397 chromosome, completeaor transcriptional regulator9e-1685.1
NC_009698:1985404:1992181199218119940761896Clostridium botulinum A str. Hall chromosome, complete genomeaor transcriptional regulator9e-1685.1
NC_010516:2064027:2071399207139920732941896Clostridium botulinum B1 str. Okra, complete genomeaor transcriptional regulator8e-1685.1
NC_009699:2116500:2121467212146721233621896Clostridium botulinum F str. Langeland chromosome, complete genomeaor transcriptional regulator8e-1685.1
NC_010520:2171584:2180905218090521828001896Clostridium botulinum A3 str. Loch Maree, complete genomeaor transcriptional regulator1e-1584.3
NC_017297:2114222:2122424212242421234641041Clostridium botulinum F str. 230613 chromosome, complete genome2e-1584
NC_008781:654289:6563736563736583341962Polaromonas naphthalenivorans CJ2, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family2e-1583.6
NC_016584:4478200:4494340449434044963011962Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional activator of acetoin/glycerol metabolism2e-1583.6
NC_012792:962292:9848279848279869532127Variovorax paradoxus S110 chromosome 2, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family7e-1582
NC_017075:1233377:1233377123337712352091833Rubrivivax gelatinosus IL144, complete genomesigma54-dependent DNA-binding transcriptional regulator2e-1480.5
NC_009959:55567:1936193636841749Dinoroseobacter shibae DFL 12 plasmid pDSHI05, complete sequenceFis family GAF modulated sigma54 specific transcriptional regulator3e-1480.1
NC_016830:2247789:2282479228247922843231845Pseudomonas fluorescens F113 chromosome, complete genomesigma-54 dependent transcriptional regulator6e-1479
NC_017986:3283433:3305354330535433074142061Pseudomonas putida ND6 chromosome, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family6e-1479
NC_015573:162000:1663901663901684712082Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeFis family PAS modulated sigma-54 specific transcriptional regulator2e-1377.8
NC_014551:809025:8322718322718340791809Bacillus amyloliquefaciens DSM 7, complete genometranscriptional activator of the ''acoA-acoB-acoC-acoL'' operon2e-1377.4
NC_017188:753039:7762817762817780891809Bacillus amyloliquefaciens TA208 chromosome, complete genometranscriptional activator of the acoA-acoB-acoC-acoL operon2e-1377.4
NC_017190:794820:8180628180628198701809Bacillus amyloliquefaciens LL3 chromosome, complete genometranscriptional activator of the acoA-acoB-acoC-acoL operon2e-1377.4
NC_017191:754453:7776957776957795031809Bacillus amyloliquefaciens XH7 chromosome, complete genometranscriptional regulator2e-1377.4
NC_018870:1953748:1969744196974419717622019Thermacetogenium phaeum DSM 12270 chromosome, complete genomesigma54 specific transcriptional regulator2e-1377
NC_014328:2643588:2646788264678826487161929Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative sigma-54-interacting transcriptional regulator2e-1377
NC_015573:2900906:2926688292668829286701983Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeGAF modulated Fis family sigma54 specific transcriptional regulator7e-1375.5
NC_015425:2389400:2409757240975724116521896Clostridium botulinum BKT015925 chromosome, complete genomesensory box sigma-54 dependent transcriptional regulator1e-1275.1
NC_014328:2643588:2659027265902726609251899Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative sigma-54-interacting transcriptional regulator1e-1275.1
NC_018644:478077:4879544879544890571104Alpha proteobacterium HIMB59 chromosome, complete genomehypothetical protein1e-1274.7
NC_015410:2351464:2352873235287323547021830Pseudomonas mendocina NK-01 chromosome, complete genomefis family GAF modulated sigma54 specific transcriptional regulator3e-1273.6
NC_017270:1755552:1793339179333917950991761Vibrio cholerae LMA3984-4 chromosome chromosome I, completeSigma-54 dependent transcriptional regulator3e-1273.2
NC_012668:1688500:1688543168854316903061764Vibrio cholerae MJ-1236 chromosome 1, complete sequencesigma-54 dependent transcriptional regulator4e-1272.8
NC_010506:3585533:3592665359266535946171953Shewanella woodyi ATCC 51908, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family7e-1272
NC_011761:1499500:1506248150624815080771830Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completesigma-54 dependent transcriptional regulator2e-1170.5
NC_009495:1759759:1765651176565117676031953Clostridium botulinum A str. ATCC 3502 chromosome, complete genomesignal-transduction and transcriptional-control protein3e-1170.1
NC_014377:2033781:2044106204410620460701965Thermosediminibacter oceani DSM 16646 chromosome, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family4e-1169.7
NC_007777:2964500:2982679298267929844421764Frankia sp. CcI3, complete genomediguanylate cyclase (GGDEF domain)5e-1169.3
NC_015312:681678:6857296857296876391911Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeGAF modulated sigma54 specific Fis family transcriptional regulator6e-1168.9
NC_016745:1892500:1908042190804219097361695Oceanimonas sp. GK1 chromosome, complete genomeacetoin catabolism regulatory protein7e-1168.9
UCMB5137:409500:4323014323014341121812Bacillus atrophaeus UCMB-5137transcriptional regulator1e-1068.2
NC_013850:3340882:3359521335952133615091989Klebsiella variicola At-22 chromosome, complete genomesigma54 specific transcriptional regulator, Fis family2e-1067.4
NC_021184:3841172:3871315387131538733152001Desulfotomaculum gibsoniae DSM 7213, complete genometranscriptional activator of acetoin/glycerol metabolism2e-1067.4
NC_009937:3324793:3342477334247733444201944Azorhizobium caulinodans ORS 571, complete genomesigma54 specific transcriptional regulator1e-0964.3
NC_003911:4001094:4001094400109440028271734Silicibacter pomeroyi DSS-3, complete genomeacetoin catabolism regulatory protein2e-0963.9
NC_008593:2136759:2153232215323221551271896Clostridium novyi NT, complete genomeSignal-transduction and transcriptional-control protein2e-0963.5
NC_014220:2102000:2114839211483921167971959Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomePAS modulated sigma54 specific transcriptional regulator, Fis family4e-0963.2
NC_016845:4077293:4099713409971341015001788Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative Fis-type transcriptional regulator6e-0962.4
NC_009832:2596344:2612844261284426148021959Serratia proteamaculans 568, complete genomePAS modulated sigma54 specific transcriptional regulator, Fis family9e-0962
NC_012560:4201969:4201969420196942038101842Azotobacter vinelandii DJ, complete genomeSigma54-dependent transcriptional activator protein, AcoR8e-0962
NC_021150:4201965:4201965420196542038061842Azotobacter vinelandii CA6, complete genomeSigma54-dependent transcriptional activator protein, AcoR8e-0962
NC_008593:2020473:2034360203436020363391980Clostridium novyi NT, complete genomeaco operon expression regulatory protein1e-0861.2
NC_012214:1650523:1650523165052316524541932Erwinia pyrifoliae Ep1/96, complete genometranscriptional regulator3e-0860.1
NC_013757:1888850:1904409190440919062141806Geodermatophilus obscurus DSM 43160, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family4e-0859.7
NC_014098:1114076:1123982112398211259551974Bacillus tusciae DSM 2912 chromosome, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family4e-0859.7
NC_015379:2751342:2757021275702127590121992Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcription factor, Fis family5e-0859.3
NC_011830:633195:6453066453066473692064Desulfitobacterium hafniense DCB-2, complete genomesigma54 specific transcriptional regulator, Fis family7e-0858.9
NC_010674:658596:6637586637586657131956Clostridium botulinum B str. Eklund 17B, complete genomeaco operon expression regulatory protein9e-0858.5
NC_007777:2964500:2964579296457929664261848Frankia sp. CcI3, complete genomeputative transcriptional regulator, Fis family8e-0858.5
NC_020291:744329:7523267523267542271902Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeAor transcriptional regulator1e-0758.2
NC_010723:622928:6289516289516309061956Clostridium botulinum E3 str. Alaska E43, complete genomesignal-transduction and transcriptional-control protein1e-0757.8
NC_014838:218000:2217222217222235721851Pantoea sp. At-9b plasmid pPAT9B01, complete sequenceGAF modulated sigma54 specific transcriptional regulator, Fis family1e-0757.8
NC_014206:2971304:2974878297487829768091932Geobacillus sp. C56-T3 chromosome, complete genomeFis family GAF modulated sigma-54 specific transcriptional regulator2e-0757.8
NC_008826:539835:5619935619935639871995Methylibium petroleiphilum PM1 plasmid RPME01, complete sequencesigma-54 dependent transcriptional activator2e-0757.4
NC_014098:1553900:1571416157141615734552040Bacillus tusciae DSM 2912 chromosome, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family2e-0757
NC_015589:3556197:3556197355619735582122016Desulfotomaculum ruminis DSM 2154 chromosome, complete genomePAS sensor protein4e-0756.2
NC_015957:3282183:3300885330088533023031419Streptomyces violaceusniger Tu 4113 chromosome, complete genomeputative phytochrome sensor protein4e-0756.2
NC_018870:115982:1286931286931308042112Thermacetogenium phaeum DSM 12270 chromosome, complete genomesigma54 specific transcriptional regulator7e-0755.5
NC_015942:722980:7299487299487321342187Acidithiobacillus ferrivorans SS3 chromosome, complete genomeFis family sigma-54 specific transcriptional regulator9e-0755.1
NC_014152:554656:556201556201557064864Thermincola sp. JR, complete genometranscriptional regulator, LuxR family9e-0755.1
NC_008271:35909:4751547515493921878Rhodococcus sp. RHA1 plasmid pRHL3, complete sequenceprobable transcriptional regulator1e-0654.7
NC_007777:2638580:2668112266811226697221611Frankia sp. CcI3, complete genomeputative transcriptional regulator, Fis family1e-0654.3
NC_014034:1418681:1435179143517914369721794Rhodobacter capsulatus SB1003 chromosome, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family3e-0653.5
NC_016943:1314500:1339114133911413409191806Blastococcus saxobsidens DD2, complete genomeputative Fis family transcriptional regulator3e-0653.1
NC_008095:8698766:8721562872156287229951434Myxococcus xanthus DK 1622, complete genomesigma-54 dependent DNA-binding response regulator4e-0652.8
NC_015422:3513689:3560112356011235620941983Alicycliphilus denitrificans K601 chromosome, complete genomeGAF modulated sigma54 specific transcriptional regulator4e-0652.8
NC_014220:1732254:1740787174078717428532067Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomesigma54 specific transcriptional regulator, Fis family8e-0652