Pre_GI Gene

Some Help

Host: NC_015957 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015957:3282183 Streptomyces violaceusniger Tu 4113 chromosome, complete genome

Host Lineage: Streptomyces violaceusniger; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Environment: Soil, Terrestrial; Temp: Mesophile. Streptomyces violaceusniger 16S rRNA gene clade form a gray aerial spore mass and a grayish-yellow substrate mycelium on oatmeal agar, and produce aerial hyphae that differentiate into spiral chains of rugose ornamented spores. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
32821833282590408hypothetical protein
32825923283017426hypothetical protein
32837713284580810short-chain dehydrogenasereductase SDRQuickGO ontologyBLASTP
32850693285905837type 11 methyltransferaseQuickGO ontologyBLASTP
328593132878471917DNA polymerase III subunit epsilonQuickGO ontologyBLASTP
32884793289396918fatty acid desaturaseQuickGO ontologyBLASTP
32903383290832495hypothetical protein
329124132934812241hypothetical protein
32934953293734240hypothetical protein
32940533294382330transposase IS4 family proteinQuickGO ontologyBLASTP
32959483296673726cyclophilin type peptidyl-prolyl cis-trans isomeraseQuickGO ontologyBLASTP
329680332982091407hypothetical proteinBLASTP
329925433007771524aldehyde dehydrogenaseQuickGO ontologyBLASTP
330088533023031419putative phytochrome sensor proteinQuickGO ontologyBLASTP
33024323302566135hypothetical protein
330296633042431278glycoside hydrolase family proteinQuickGO ontologyBLASTP
330463933058111173acyl-CoA dehydrogenase domain-containing proteinQuickGO ontologyBLASTP