Pre_GI: BLASTP Hits

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Query: NC_014328:303063:362360 Clostridium ljungdahlii ATCC 49587 chromosome, complete genome

Start: 362360, End: 363604, Length: 1245

Host Lineage: Clostridium ljungdahlii; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain was isolated from chicken yard waste and is studied for its ability to produce ethanol. This acetogenic species has the ability to convert carbon monoxide into ethanol. The yield of this process has been increased substantially in the laboratory by using a dual-fermentation system. A methanogenic conversion step has also been designed for utilizing some of the waste products generated during the synthetic process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014393:937000:9529689529689542211254Clostridium cellulovorans 743B chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein0733
NC_011898:3367457:3396191339619133974321242Clostridium cellulolyticum H10, complete genomeDNA methylase N-4/N-6 domain protein7e-158557
NC_009706:2673906:2721831272183127230721242Clostridium kluyveri DSM 555 chromosome, complete genomeDNA methylase1e-157556
NC_003909:386880:4081694081694094101242Bacillus cereus ATCC 10987, complete genomeDNA methylase, family protein6e-155547
NC_010320:1268355:1285298128529812865361239Thermoanaerobacter sp. X514 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-154545
NC_016633:3069518:3099711309971131009551245Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeDNA modification methylase1e-149529
NC_015697:506494:5218415218415230701230Lactobacillus reuteri SD2112 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase1e-148526
NC_009633:4097536:4125793412579341270281236Alkaliphilus metalliredigens QYMF chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein4e-145514
NC_008530:1454118:1470694147069414719201227Lactobacillus gasseri ATCC 33323, complete genomeParB-like nuclease domain and DNA modification methylase domain2e-144512
NC_015697:468234:4808454808454820711227Lactobacillus reuteri SD2112 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase2e-140499
NC_007432:654904:6757886757886770261239Streptococcus agalactiae A909, complete genomeprophage LambdaSa04, DNA methylase1e-137489
NC_009012:1934107:1964406196440619656591254Clostridium thermocellum ATCC 27405, complete genomeParB-like nuclease1e-130466
NC_015520:2974048:2990245299024529914981254Mahella australiensis 50-1 BON chromosome, complete genomeParB domain-containing protein nuclease2e-129462
NC_016627:4323370:4352807435280743540601254Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA modification methylase3e-129461
NC_018870:2316499:2354383235438323556361254Thermacetogenium phaeum DSM 12270 chromosome, complete genomeDNA methylase1e-128459
NC_014410:800500:8099698099698112221254Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,DNA methylase N-4/N-6 domain protein5e-128457
NC_010337:2848360:2893873289387328951051233Heliobacterium modesticaldum Ice1, complete genomeDNA methylase4e-124444
NC_009633:2592000:2615672261567226169461275Alkaliphilus metalliredigens QYMF chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-122438
NC_004557:2037500:2054930205493020560031074Clostridium tetani E88, complete genomechromosome partitioning parB family protein3e-121435
NC_018867:1407163:1430026143002614312731248Dehalobacter sp. CF chromosome, complete genomeDNA methylase N-4/N-69e-121433
NC_016641:2587000:2603244260324426045091266Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein8e-119427
NC_012491:3736167:3742439374243937437371299Brevibacillus brevis NBRC 100599, complete genomehypothetical protein9e-113407
NC_014393:4775452:4810611481061148118671257Clostridium cellulovorans 743B chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein2e-110399
NC_020207:1170000:1176467117646711776661200Enterococcus faecium NRRL B-2354, complete genomeDNA methylase2e-107389
NC_009617:1897887:1913872191387219151041233Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-99362
NC_014632:1112733:1138770113877011400261257Ilyobacter polytropus DSM 2926 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein7e-97354
NC_009012:1934107:1965665196566519669631299Clostridium thermocellum ATCC 27405, complete genomeDNA methylase N-4/N-66e-92338
NC_015520:2974048:2991504299150429928021299Mahella australiensis 50-1 BON chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein9e-92337
NC_014410:800500:8086658086658099631299Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,DNA methylase N-4/N-6 domain protein1e-90333
NC_016627:4323370:4354066435406643553641299Clostridium clariflavum DSM 19732 chromosome, complete genomeDNA modification methylase2e-90333
NC_018870:2316499:2355642235564223569401299Thermacetogenium phaeum DSM 12270 chromosome, complete genomeDNA methylase1e-89330
NC_016625:1259778:1260363126036312616371275Burkholderia sp. YI23 chromosome 2, complete sequenceDNA methylase N-4/N-6 domain-containing protein3e-84312
NC_012471:141463:1552281552281563941167Streptococcus equi subsp. equi 4047, complete genomephage DNA methylase5e-82305
NC_002737:533291:5450875450875462531167Streptococcus pyogenes M1 GAS, complete genomeconserved hypothetical protein, phage associated1e-80300
NC_015422:2078618:2108728210872821099901263Alicycliphilus denitrificans K601 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein2e-73276
NC_009659:3103601:3103601310360131048361236Janthinobacterium sp. Marseille chromosome, complete genomeDNA modification methylase5e-72271
NC_013722:2848366:2849628284962828509261299Xanthomonas albilineans, complete genomeputative adn methyltransferase protein1e-71270
NC_010163:614634:629457629457630335879Acholeplasma laidlawii PG-8A chromosome, complete genomeDNA modification methylase2e-69263
NC_010981:1371265:1388212138821213894441233Wolbachia pipientis, complete genomePhage related DNA methylase5e-68258
NC_010981:242500:2620412620412632731233Wolbachia pipientis, complete genomePhage related DNA methylase5e-68258
NC_010981:314745:3355613355613367931233Wolbachia pipientis, complete genomePhage related DNA methylase5e-68258
NC_002978:549454:5722595722595734851227Wolbachia endosymbiont of Drosophila melanogaster, complete genomeprophage LambdaW4, DNA methylase3e-67255
NC_012416:573202:5984745984745997001227Wolbachia sp. wRi, complete genomeDNA methylase5e-67255
NC_012416:1079661:1104933110493311061591227Wolbachia sp. wRi, complete genomeDNA methylase5e-67255
NC_002978:234082:2486082486082498371230Wolbachia endosymbiont of Drosophila melanogaster, complete genomeprophage LambdaW1, DNA methylase3e-66252
NC_010804:996837:1034583103458310358481266Burkholderia multivorans ATCC 17616 chromosome 1, completeputative DNA methylase7e-65248
NC_010084:2484000:2488925248892524901901266Burkholderia multivorans ATCC 17616 chromosome 1, completeDNA methylase N-4/N-6 domain-containing protein7e-65248
NC_014365:2843126:2846724284672428479111188Desulfarculus baarsii DSM 2075 chromosome, complete genomeParB domain protein nuclease3e-64246
NC_014365:2888897:2887701288770128889001200Desulfarculus baarsii DSM 2075 chromosome, complete genomeParB domain protein nuclease8e-64244
NC_011420:36272:4879748797500351239Rhodospirillum centenum SW, complete genomeDNA methylase, putative9e-62238
NC_016026:1969766:1978706197870619800371332Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeDNA methylase family protein3e-49196
NC_017082:532000:5490945490945503591266Bradyrhizobium sp. S23321, complete genomehypothetical protein8e-46184
NC_014217:4550544:4555744455574445571861443Starkeya novella DSM 506 chromosome, complete genomeDNA methylase N-4/N-6 domain protein1e-43177
NC_008358:2638245:2697509269750926988611353Hyphomonas neptunium ATCC 15444, complete genomeDNA methylase8e-43174
NC_015593:1587684:1590233159023315915491317Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeDNA methylase N-4/N-6 domain-containing protein3e-42172
NC_009511:1746631:1754713175471317561641452Sphingomonas wittichii RW1 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein4e-41169
NC_008751:1043269:1077549107754910796032055Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeParB domain protein nuclease6e-40165
NC_012988:769981:8472298472298487131485Methylobacterium extorquens DM4, complete genomephage methyltransferase4e-38159
NC_010172:798923:8671778671778686431467Methylobacterium extorquens PA1, complete genomeDNA methylase N-4/N-6 domain protein2e-37156
NC_014483:3339926:334542833454283345886459Paenibacillus polymyxa E681 chromosome, complete genomePredicted transcriptional regulator1e-35150
NC_003212:1713958:1740897174089717422341338Listeria innocua Clip11262, complete genomehypothetical protein2e-35150
NC_015519:2489728:249187024918702492383514Tepidanaerobacter sp. Re1 chromosome, complete genome3e-32139
NC_010644:1039576:1058326105832610595161191Elusimicrobium minutum Pei191, complete genomenuclease2e-31136
NC_015422:2078618:2107316210731621087311416Alicycliphilus denitrificans K601 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-29129
NC_011958:976500:100417210041721005065894Rhodobacter sphaeroides KD131 chromosome 2, complete genomeDNA methylase N-4/N-62e-28127
NC_011386:931140:9565829565829579871406Oligotropha carboxidovorans OM5, complete genome1e-28127
NC_014217:3024961:303590830359083036861954Starkeya novella DSM 506 chromosome, complete genomehypothetical protein9e-28124
NC_012491:1187864:120306612030661203548483Brevibacillus brevis NBRC 100599, complete genomehypothetical protein5e-27122
NC_003296:673790:710925710925711593669Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein2e-25117
NC_009659:3103601:3102180310218031036041425Janthinobacterium sp. Marseille chromosome, complete genomephage related DNA methyltransferase2e-24113
NC_020207:1906803:191206119120611912357297Enterococcus faecium NRRL B-2354, complete genomeDNA methylase1e-23110
NC_011958:976500:1005431100543110068071377Rhodobacter sphaeroides KD131 chromosome 2, complete genomeDNA modification methylase4e-23109
NC_011420:36272:4740747407487921386Rhodospirillum centenum SW, complete genomeDNA methylase, putative1e-22107
NC_013790:406681:417460417460418080621Methanobrevibacter ruminantium M1 chromosome, complete genomeParB-like nuclease domain-containing protein1e-21104
NC_014310:1822751:186556618655661866315750Ralstonia solanacearum PSI07 megaplasmid, complete sequencehypothetical protein5e-2099
NC_011958:976500:100507210050721005434363Rhodobacter sphaeroides KD131 chromosome 2, complete genomeDNA methylase N-4/N-65e-1789
NC_015063:1:166811668117325645Rahnella sp. Y9602 plasmid pRAHAQ02, complete sequenceDNA methylase N-4/N-6 domain protein6e-1582
NC_010084:2484000:2487717248771724889281212Burkholderia multivorans ATCC 17616 chromosome 1, completeDNA methylase N-4/N-6 domain-containing protein2e-1480.9
NC_010804:996837:1035845103584510370501206Burkholderia multivorans ATCC 17616 chromosome 1, complete2e-1480.9
NC_014311:2606434:262127426212742621693420Ralstonia solanacearum PSI07 chromosome, complete genomehypothetical protein8e-1478.6
NC_007297:1406796:141074714107471411598852Streptococcus pyogenes MGAS5005, complete genomeadenine-specific methyltransferase3e-1376.6
NC_008023:1426687:142909014290901429941852Streptococcus pyogenes MGAS2096, complete genomeAdenine-specific methyltransferase3e-1376.6
NC_008021:1401249:140520014052001406051852Streptococcus pyogenes MGAS9429, complete genomeadenine-specific methyltransferase3e-1376.6
NC_015711:4319648:433960343396034340313711Myxococcus fulvus HW-1 chromosome, complete genomeputative DNA methyltransferase1e-1274.3
NC_012471:781063:795598795598796308711Streptococcus equi subsp. equi 4047, complete genomeDNA methylase3e-1273.2
NC_007414:56508:619386193862621684Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequencehypothetical protein4e-1272.8
NC_002128:35000:393633936340046684Escherichia coli O157:H7 str. Sakai plasmid pO157, completehemagglutinin-associated protein4e-1272.8
NC_010609:880196:894015894015894776762Lactobacillus reuteri JCM 1112, complete genomehypothetical protein4e-1272.8
NC_009513:870837:884638884638885417780Lactobacillus reuteri F275, complete genomeParB domain protein nuclease5e-1272.8
NC_011365:1171536:120245612024561203127672Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein2e-1170.5
NC_009787:17344:180141801418697684Escherichia coli E24377A plasmid pETEC_35, complete sequenceDNA methylase family protein6e-1168.9
NC_017082:532000:551466551466552002537Bradyrhizobium sp. S23321, complete genomehypothetical protein8e-1168.6
NC_006856:95830:960529605296735684Salmonella enterica subsp. enterica serovar Choleraesuis strputative site-specific DNA methyl transferase1e-1068.2
NC_003296:673790:711726711726711974249Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein1e-1068.2
NC_016945:370471:400214400214400867654Vibrio cholerae IEC224 chromosome II, complete sequencehemagglutinin associated protein1e-1068.2
NC_017319:155958:163189163189163872684Shigella flexneri 2002017 plasmid pSFxv_1, complete sequencehypothetical protein1e-1067.8
NC_004851:157675:164527164527165210684Shigella flexneri 2a str. 301 plasmid pCP301, complete sequencehypothetical protein1e-1067.8
NC_014150:2201251:223851922385192239298780Brachyspira murdochii DSM 12563 chromosome, complete genomeDNA methylase N-4/N-6 domain protein2e-1067
NC_006270:2850354:285968328596832860039357Bacillus licheniformis ATCC 14580, complete genomehypothetical protein2e-1067
NC_006322:2851215:286054328605432860899357Bacillus licheniformis ATCC 14580, complete genomehypothetical protein2e-1067
NC_002506:370629:400356400356401048693Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehaemagglutinin associated protein4e-1066.2
NC_009456:787322:851608851608852300693Vibrio cholerae O395 chromosome 1, complete sequencehemagglutinin associated protein4e-1066.2
NC_012580:353273:376048376048376740693Vibrio cholerae M66-2 chromosome II, complete sequenceDNA methylase N-4/N-64e-1066.2
NC_012583:361241:411642411642412334693Vibrio cholerae O395 chromosome chromosome II, complete sequenceDNA methylase N-4/N-64e-1066.2
NC_012667:931390:985200985200985892693Vibrio cholerae MJ-1236 chromosome 2, complete genomehemagglutinin associated protein4e-1066.2
NC_016446:49618:100895100895101587693Vibrio cholerae O1 str. 2010EL-1786 chromosome 2, completehemagglutinin associated protein4e-1066.2
NC_011365:1103927:110848411084841109161678Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein5e-1065.9
NC_010158:92819:108442108442109119678Yersinia pestis Angola plasmid pMT-pPCP, complete sequenceDNA methylase1e-0964.7
NC_005815:61148:893978939790074678Yersinia pestis biovar Microtus str. 91001 plasmid pMT1, completeputative methylase1e-0964.7
NC_004838:51013:666486664867325678Yersinia pestis KIM plasmid pMT-1, complete sequencehypothetical protein1e-0964.7
NC_008118:56777:947909479095467678Yersinia pestis Nepal516 plasmid pMT, complete sequenceDNA methylase1e-0964.7
NC_003134:64672:646726467265349678Yersinia pestis CO92 plasmid pMT1, complete sequenceputative DNA methylase1e-0964.7
NC_009378:106193:130882130882131559678Yersinia pestis Pestoides F plasmid MT, complete sequenceputative methylase1e-0964.7
NC_020387:796253:816956816956817669714Dehalococcoides mccartyi BTF08, complete genomeDNA methyltransferase2e-0963.5
NC_018604:758819:762103762103763008906Brachyspira pilosicoli WesB complete genomeDNA methylase N-4/N-6 domain-containing protein3e-0963.2
NC_018604:2871328:288627128862712887047777Brachyspira pilosicoli WesB complete genomeDNA methylase N-4/N-6 domain-containing protein5e-0962.8
NC_018607:2747462:276222627622262763002777Brachyspira pilosicoli B2904 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein5e-0962.8
NC_008278:2972323:298769929876992988469771Frankia alni ACN14a, complete genomehypothetical protein6e-0962.4
NC_010546:1853825:185626218562621857116855Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceprobable DNA-methyltransferase6e-0962.4
NC_014738:2094000:212156121215612122286726Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,DNA methylase1e-0861.2
NC_017045:119046:126810126810127535726Riemerella anatipestifer ATCC 11845 = DSM 15868 chromosome,DNA methylase1e-0861.2
NC_014330:1324500:133930513393051340087783Brachyspira pilosicoli 95/1000 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-0861.2
NC_010546:4590994:460997546099754610862888Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceputative DNA methylase N-4/N-61e-0861.2
NC_009718:579291:580462580462581316855Fervidobacterium nodosum Rt17-B1, complete genomeDNA methylase N-4/N-6 domain-containing protein1e-0861.2
NC_012973:49208:485134851349211699Helicobacter pylori B38 chromosome, complete genometype II adenine methyltransferase2e-0860.8
NC_008563:1475500:148710414871041487895792Escherichia coli APEC O1, complete genomeputative transcriptional regulator2e-0860.8
NC_009615:1001744:101259610125961013336741Parabacteroides distasonis ATCC 8503 chromosome, complete genomeDNA methylase2e-0860.5
NC_003485:1450045:147796114779611478479519Streptococcus pyogenes MGAS8232, complete genomehypothetical protein3e-0860.1
NC_008278:2972323:298386729838672984580714Frankia alni ACN14a, complete genomehypothetical protein3e-0860.1
CP002516:2580774:258429925842992585087789Escherichia coli KO11, complete genomeParB domain protein nuclease3e-0860.1
NC_016902:2580774:258429925842992585087789Escherichia coli KO11FL chromosome, complete genomeParB domain-containing protein nuclease3e-0860.1
NC_010067:4149298:416498041649804165864885Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-0859.3
NC_012796:4075583:408655940865594087224666Desulfovibrio magneticus RS-1, complete genomehypothetical protein7e-0858.9
NC_014034:1036652:103761910376191038395777Rhodobacter capsulatus SB1003 chromosome, complete genomeParB domain-containing protein nuclease9e-0858.5
NC_020387:1257163:128225112822511282886636Dehalococcoides mccartyi BTF08, complete genomeParB-like nuclease domain-containing protein1e-0758.2
NC_013890:1142500:116059911605991161234636Dehalococcoides sp. GT chromosome, complete genomeParB domain protein nuclease2e-0757.4
NC_004603:370320:392721392721393386666Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehaemagglutinin associated protein2e-0757.4
NC_014253:312354:329319329319330101783Methanohalobium evestigatum Z-7303 chromosome, complete genomeDNA methylase N-4/N-6 domain-containing protein3e-0757
NC_014033:1152994:1164840116484011660841245Prevotella ruminicola 23 chromosome, complete genomeDNA (cytosine-5-)-methyltransferase2e-0757
NC_013665:918313:9705219705219715761056Methanocella paludicola SANAE, complete genomeputative DNA methylase3e-0756.6
NC_016111:2892391:289888828988882899634747Streptomyces cattleya NRRL 8057, complete genomeDNA methylase4e-0756.2
NC_013665:2176502:219282221928222193739918Methanocella paludicola SANAE, complete genomeputative DNA methylase4e-0756.2
NC_004606:623853:638522638522639040519Streptococcus pyogenes SSI-1, complete genomehypothetical protein1e-0654.7
NC_007296:1230614:125515812551581255676519Streptococcus pyogenes MGAS6180, complete genomeParB-like protein1e-0654.7
NC_015434:228912:239951239951240328378Verrucosispora maris AB-18-032 chromosome, complete genomehypothetical protein6e-0652.4
NC_009708:2537557:254313325431332543642510Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeParB family protein7e-0652.4