Pre_GI Gene

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Host: NC_010067 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010067:4149298 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
41487754149338564hypothetical proteinBLASTP
41492984149900603hypothetical proteinBLASTP
41499024150723822hypothetical proteinBLASTP
41507204150977258hypothetical proteinBLASTP
41509534151507555hypothetical proteinBLASTP
41520054152536532small subunit ribosomal RNAQuickGO ontologyBLASTP
4153591415366474tRNA-IleQuickGO ontology
41537684153965198hypothetical protein
4153777415384973tRNA-AlaQuickGO ontologyBLASTP
41570284157183156hypothetical protein
415721141573261165S ribosomal RNAQuickGO ontologyBLASTP
4157341415741373tRNA-ThrQuickGO ontologyBLASTP
415745641575711165S ribosomal RNAQuickGO ontologyBLASTP
41584184158597180hypothetical protein
415852941616423114hypothetical proteinBLASTP
416165441628111158hypothetical proteinBLASTP
41632014163884684hypothetical proteinBLASTP
41639034164145243hypothetical proteinBLASTP
41641424164579438hypothetical proteinBLASTP
41647294164914186hypothetical protein
41649804165864885hypothetical proteinBLASTP
41659504166246297hypothetical proteinBLASTP
41662724167237966hypothetical proteinBLASTP