Pre_GI Gene

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Host: NC_013890 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013890:1142500 Dehalococcoides sp. GT chromosome, complete genome

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
11425541143072519SsrA-binding proteinQuickGO ontologyBLASTP
11430871143437351BLASTP
114335911450261668Resolvase domain proteinQuickGO ontologyBLASTP
11450191145198180hypothetical proteinBLASTP
11452001145817618Resolvase domain proteinQuickGO ontologyBLASTP
11458171146266450hypothetical proteinBLASTP
11463211146512192hypothetical proteinBLASTP
11465091147144636ParB domain protein nucleaseQuickGO ontologyBLASTP
11471411147833693hypothetical proteinBLASTP
114783011500282199Toprim sub domain proteinQuickGO ontologyBLASTP
11501061150855750hypothetical proteinBLASTP
115098811520161029phosphoadenosine phosphosulfate reductaseQuickGO ontologyBLASTP
11520131152666654hypothetical proteinBLASTP
11526951153486792hypothetical proteinBLASTP
115352611547821257Site-specific DNA-methyltransferase cytosine-N4-specificQuickGO ontologyBLASTP
11549041155620717putative glycosyl hydrolaseQuickGO ontologyBLASTP
115592411573691446hypothetical proteinBLASTP
115741811591121695Resolvase domain proteinQuickGO ontologyBLASTP
11591021159281180proteasome subunit alphaQuickGO ontologyBLASTP
11592851159887603Resolvase domain proteinQuickGO ontologyBLASTP
11598841160339456hypothetical proteinBLASTP
116042311606021804Fe-4S ferredoxin iron-sulfur binding domain-containing proteinQuickGO ontologyBLASTP
11605991161234636ParB domain protein nucleaseQuickGO ontologyBLASTP
11612351161966732putative DNA modification proteinQuickGO ontologyBLASTP
116195411640592106hypothetical proteinBLASTP
11642071164944738Rubredoxin-type FeCys4 proteinQuickGO ontologyBLASTP
11652181165322105putative sodiumcalcium exchanger proteinQuickGO ontology
116530611664751170FMN-binding domain proteinQuickGO ontologyBLASTP
11666481166929282reductive dehalogenase anchoring protein putativeQuickGO ontologyBLASTP
116697011685291560reductive dehalogenaseQuickGO ontologyBLASTP
116880211704541653Resolvase domain proteinQuickGO ontologyBLASTP
11704471170626180hypothetical proteinBLASTP