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Query: NC_013890:1142500:1159285 Dehalococcoides sp. GT chromosome, complete genome

Start: 1159285, End: 1159887, Length: 603

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: Temp: Mesophile; Habitat: Fresh water, Groundwater. Dehalococcoides sp. GT was isolated from an chloroethene-contaminated aquifer. This strain can dechlorinate trichloroethene and vinyl chloride. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020387:1257163:128091712809171281537621Dehalococcoides mccartyi BTF08, complete genomeresolvase domain protein7e-59226
NC_007356:1165760:116760111676011168218618Dehalococcoides sp. CBDB1, complete genomeDNA invertase/resolvase family protein2e-32138
NC_013890:1142500:114520011452001145817618Dehalococcoides sp. GT chromosome, complete genomeResolvase domain protein5e-30130
NC_002936:67896:752267522675843618Dehalococcoides ethenogenes 195, complete genomeresolvase domain protein2e-1582.4
NC_013552:1187299:119098811909881191572585Dehalococcoides sp. VS, complete genomeDNA invertase/resolvase1e-1376.6
NC_020387:1257163:126034012603401260924585Dehalococcoides mccartyi BTF08, complete genomeresolvase domain protein1e-1376.6
NC_002936:253760:267602267602268237636Dehalococcoides ethenogenes 195, complete genomeresolvase domain protein1e-1273.2
NC_002936:797110:815014815014815649636Dehalococcoides ethenogenes 195, complete genomeresolvase domain protein1e-1273.2
NC_009455:53000:757857578576420636Dehalococcoides sp. BAV1 chromosome, complete genomeresolvase domain-containing protein1e-1273.2
NC_002689:696500:699600699600700142543Thermoplasma volcanium GSS1, complete genomeSite-specific recombinase, DNA invertase Pin-related4e-1064.7
NC_002689:1548000:155904915590491559654606Thermoplasma volcanium GSS1, complete genomeSite-specific recombinase, DNA invertase Pin-related5e-0857.8
NC_013169:2104597:2110419211041921117951377Kytococcus sedentarius DSM 20547, complete genomesite-specific recombinase, DNA invertase Pin1e-0653.1
NC_018876:587094:596638596638597261624Methanolobus psychrophilus R15 chromosome, complete genomeputative DNA-invertase (Site-specific recombinase)9e-0650.1