Pre_GI: BLASTP Hits

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Query: NC_013316:1:21926 Clostridium difficile R20291, complete genome

Start: 21926, End: 22276, Length: 351

Host Lineage: Peptoclostridium difficile; Peptoclostridium; Peptostreptococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium difficile R20291 was isolated in Stoke Mandeville Hospital, UK in 2006 and is closely related to the North American hypervirulent BI strains. Clostridium difficile, a Gram-positive, spore-forming anaerobic bacterium, is the leading cause of infectious diarrhea among patients in hospitals worldwide, causing C. difficile infection (CDI). An important nosocomial pathogen, it is frequently associated with antibiotic treatment and causes diseases ranging from antibiotic-associated diarrhea to life-threatening pseudomembraneous colitis.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009089:1:221662216622516351Clostridium difficile 630, complete genomehypothetical protein8e-49191
NC_021182:93000:982219822198562342Clostridium pasteurianum BC1, complete genomeDNA-binding protein, YbaB/EbfC family7e-31132
NC_020291:6274030:629448662944866294824339Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeDNA-binding protein, YbaB/EbfC family1e-29128
NC_019970:35985:402624026240597336Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeDNA-binding protein, YbaB/EbfC family3e-29127
NC_014410:51711:553345533455669336Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,hypothetical protein5e-29126
NC_015913:35837:419994199942334336Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomehypothetical protein8e-29125
NC_009495:38000:397853978540126342Clostridium botulinum A str. ATCC 3502 chromosome, complete genomehypothetical protein2e-28124
NC_009697:38000:398003980040141342Clostridium botulinum A str. ATCC 19397 chromosome, completehypothetical protein2e-28124
NC_009698:38000:398003980040141342Clostridium botulinum A str. Hall chromosome, complete genomehypothetical protein2e-28124
NC_009699:33452:351423514235483342Clostridium botulinum F str. Langeland chromosome, complete genomehypothetical protein2e-28124
NC_008346:36176:377173771738016300Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein4e-28123
NC_010320:33814:395323953239867336Thermoanaerobacter sp. X514 chromosome, complete genomehypothetical protein4e-28123
NC_014538:33718:394363943639771336Thermoanaerobacter sp. X513 chromosome, complete genomehypothetical protein4e-28123
NC_015958:57957:615466154661881336Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehypothetical protein8e-28122
NC_014964:2237979:225881822588182259153336Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehypothetical protein8e-28122
NC_010321:2256758:227167422716742272009336Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completehypothetical protein8e-28122
NC_016012:16134:448914489145226336Candidatus Arthromitus sp. SFB-rat-Yit, complete genometranscriptional regulatory protein4e-27119
NC_013921:36000:419534195342288336Thermoanaerobacter italicus Ab9 chromosome, complete genomehypothetical protein8e-27119
NC_014209:81643:100333100333100668336Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,hypothetical protein8e-27119
NC_010424:14657:405034050340811309Candidatus Desulforudis audaxviator MP104C, complete genomeconserved hypothetical protein 1036e-26115
NC_013520:1860286:186624318662431866572330Veillonella parvula DSM 2008, complete genomehypothetical protein1e-25115
NC_013939:148706:150332150332150646315Deferribacter desulfuricans SSM1, complete genomehypothetical protein9e-25112
UCMB5137:1396603:140126814012681401591324Bacillus atrophaeus UCMB-5137hypothetical protein1e-24111
NC_014976:2231984:224054522405452240868324Bacillus subtilis BSn5 chromosome, complete genomehypothetical protein4e-24110
NC_007503:2338110:237324123732412373570330Carboxydothermus hydrogenoformans Z-2901, complete genomeconserved hypothetical protein TIGR001034e-24110
NC_015555:49842:557735577356108336Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeUPF0133 protein ybaB5e-24109
NC_015737:981712:996224996224996568345Clostridium sp. SY8519, complete genomehypothetical protein2e-23107
NC_011567:1:272592725927591333Anoxybacillus flavithermus WK1, complete genomehypothetical protein7e-23105
NC_011296:1039749:103940810394081039752345Thermodesulfovibrio yellowstonii DSM 11347, complete genomehypothetical protein4e-22103
NC_015738:873653:888702888702889010309Eggerthella sp. YY7918, complete genomehypothetical protein4e-22103
NC_019978:39000:423584235842666309Halobacteroides halobius DSM 5150, complete genomeDNA-binding protein, YbaB/EbfC family3e-22103
NC_017297:33519:353123531235551240Clostridium botulinum F str. 230613 chromosome, complete genomehypothetical protein2e-22103
NC_014355:243543:249088249088249411324Candidatus Nitrospira defluvii, complete genomehypothetical protein7e-22102
NC_014376:189319:190946190946191299354Clostridium saccharolyticum WM1 chromosome, complete genomehypothetical protein2e-21101
NC_014654:391201:398191398191398499309Halanaerobium sp. 'sapolanicus' chromosome, complete genomeUncharacterized protein family UPF01332e-21101
NC_018665:1:282262822628546321Exiguobacterium antarcticum B7 chromosome, complete genomeYbaB/EbfC DNA-binding family proteina9e-2198.6
NC_010556:26567:282762827628596321Exiguobacterium sibiricum 255-15, complete genomehypothetical protein9e-2198.6
NC_014387:281157:285854285854286210357Butyrivibrio proteoclasticus B316 chromosome 1, complete genomehypothetical protein1e-2098.2
NC_017208:1:271092710927438330Bacillus thuringiensis serovar chinensis CT-43 chromosome, completehypothetical protein2e-2097.8
NC_014171:1:273312733127660330Bacillus thuringiensis BMB171 chromosome, complete genomehypothetical protein2e-2097.8
NC_014831:65408:692946929469626333Thermaerobacter marianensis DSM 12885 chromosome, complete genomeUncharacterized protein family UPF01332e-2097.4
NC_017167:129988:133641133641133952312Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1hypothetical protein8e-2095.5
NC_014219:25845:338013380134103303Bacillus selenitireducens MLS10 chromosome, complete genomehypothetical protein9e-2095.5
NC_006177:12383:179611796118290330Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein4e-1993.2
NC_017079:2243451:224590822459082246276369Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomehypothetical protein3e-1890.5
NC_012121:113912:120372120372120689318Staphylococcus carnosus subsp. carnosus TM300, complete genomehypothetical protein3e-1890.1
NC_002952:494500:512344512344512661318Staphylococcus aureus subsp. aureus MRSA252, complete genomehypothetical protein2e-1788.2
NC_002745:487500:504381504381504698318Staphylococcus aureus subsp. aureus N315, complete genomehypothetical protein2e-1788.2
NC_003923:473743:489760489760490077318Staphylococcus aureus subsp. aureus MW2, complete genomehypothetical protein2e-1788.2
NC_002758:511247:528695528695529012318Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein2e-1788.2
NC_013450:448054:465502465502465819318Staphylococcus aureus subsp. aureus ED98, complete genomehypothetical protein2e-1788.2
NC_017337:498688:516136516136516453318Staphylococcus aureus subsp. aureus ED133 chromosome, completehypothetical protein2e-1788.2
NC_017338:470993:487789487789488106318Staphylococcus aureus subsp. aureus JKD6159 chromosome, completehypothetical protein2e-1788.2
NC_009632:522264:539712539712540029318Staphylococcus aureus subsp. aureus JH1 chromosome, completehypothetical protein2e-1787.8
NC_009487:522193:539641539641539958318Staphylococcus aureus subsp. aureus JH9 chromosome, completehypothetical protein2e-1787.8
NC_008278:667023:670471670471670980510Frankia alni ACN14a, complete genomehypothetical protein8e-1785.9
NC_014655:17641:349643496435293330Leadbetterella byssophila DSM 17132 chromosome, complete genomeuncharacterized protein family upf01331e-1685.1
NC_016148:951446:970364970364970672309Thermovirga lienii DSM 17291 chromosome, complete genomehypothetical protein2e-1684.7
NC_009720:2424975:242760324276032427923321Xanthobacter autotrophicus Py2, complete genomehypothetical protein5e-1579.7
NC_007508:1221500:125962012596201259940321Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein6e-1579.3
NC_009092:2589000:261129326112932611622330Shewanella loihica PV-4, complete genomeconserved hypothetical protein 1032e-1477.4
NC_016010:1169850:118947611894761189796321Xanthomonas axonopodis pv. citrumelo F1 chromosome, completehypothetical protein4e-1476.6
NC_008027:1847040:187045918704591870794336Pseudomonas entomophila L48, complete genomehypothetical protein4e-1476.6
NC_015733:4130000:413001841300184130353336Pseudomonas putida S16 chromosome, complete genomehypothetical protein7e-1475.9
NC_010172:2082000:208203520820352082358324Methylobacterium extorquens PA1, complete genomehypothetical protein7e-1475.9
NC_012988:2455807:245580724558072456130324Methylobacterium extorquens DM4, complete genomehypothetical protein7e-1475.9
NC_017256:515579:533553533553533882330Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,DNA-binding protein1e-1375.5
NC_004757:427483:472265472265472588324Nitrosomonas europaea ATCC 19718, complete genomeDUF149:Conserved hypothetical protein 1031e-1375.1
NC_008825:2700617:270180027018002702126327Methylibium petroleiphilum PM1, complete genomehypothetical protein2e-1374.7
NC_016109:4088259:409211840921184092465348Kitasatospora setae KM-6054, complete genomehypothetical protein2e-1374.3
NC_020829:3434736:343839234383923438718327Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein4e-1373.6
NC_019815:782987:784710784710785033324Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneihypothetical protein5e-1373.2
NC_019814:320260:325599325599325922324Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonashypothetical protein5e-1373.2
NC_015410:2258800:228094122809412281267327Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein4e-1373.2
NC_010501:3987615:398908139890813989416336Pseudomonas putida W619, complete genomehypothetical protein1e-1271.6
NC_008786:557314:576631576631576963333Verminephrobacter eiseniae EF01-2, complete genomeconserved hypothetical protein 1032e-1271.6
NC_016147:2337244:233896323389632339283321Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein2e-1271.2
NC_021150:1965264:197275919727591973085327Azotobacter vinelandii CA6, complete genomehypothetical protein5e-1269.7
NC_012560:1965251:197274619727461973072327Azotobacter vinelandii DJ, complete genomeConserved hypothetical protein 1035e-1269.7
NC_013510:5499447:551658655165865516945360Thermomonospora curvata DSM 43183, complete genomehypothetical protein1e-1168.6
NC_020299:149118:154438154438154761324Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeYbaB/EbfC family DNA-binding protein2e-1167.4
NC_014752:1363562:137464813746481374983336Neisseria lactamica ST-640, complete genomehypothetical protein4e-1166.6
NC_008767:1363288:137462713746271374962336Neisseria meningitidis FAM18, complete genomehypothetical protein7e-1165.9
NC_014815:2639339:265439426543942654702309Micromonospora sp. L5 chromosome, complete genomehypothetical protein1e-1065.1
NC_014958:923646:929304929304929603300Deinococcus maricopensis DSM 21211 chromosome, complete genomehypothetical protein1e-1065.1
NC_004344:589375:609366609366609674309Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein1e-1064.7
NC_004545:499709:501046501046501378333Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genomehypothetical protein YbaB2e-1064.7
NC_016893:218376:222081222081222407327Wigglesworthia glossinidia endosymbiont of Glossina morsitansDNA-binding protein2e-1064.3
NC_014761:1405408:140866014086601408974315Oceanithermus profundus DSM 14977 chromosome, complete genomehypothetical protein4e-1063.5
NC_006155:1191307:119333911933391193671333Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein6e-0959.7
NC_004088:1196875:119687511968751197207333Yersinia pestis KIM, complete genomehypothetical protein6e-0959.7
NC_010634:1175404:117540411754041175736333Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein6e-0959.7
NC_010159:3033989:303602130360213036353333Yersinia pestis Angola, complete genomeconserved hypothetical protein TIGR001036e-0959.7
NC_010465:3465351:349698234969823497314333Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein6e-0959.7
NC_008150:2878450:291023729102372910569333Yersinia pestis Antiqua, complete genomehypothetical protein6e-0959.7
NC_008149:1122693:112472511247251125057333Yersinia pestis Nepal516, complete genomehypothetical protein6e-0959.7
NC_005810:872672:874704874704875036333Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein6e-0959.7
NC_009381:3094939:312670831267083127040333Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein6e-0959.7
NC_009708:3411153:344275234427523443084333Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein6e-0959.7
NC_017168:2281040:228307222830722283404333Yersinia pestis A1122 chromosome, complete genomehypothetical protein6e-0959.7
NC_017265:3240379:327215632721563272488333Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein6e-0959.7
NC_008025:1588348:160572616057261606241516Deinococcus geothermalis DSM 11300, complete genomeconserved hypothetical protein 1031e-0858.9
NC_014210:5683616:570499057049905705352363Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,hypothetical protein1e-0858.5
NC_016511:234431:255601255601255924324Propionibacterium acnes TypeIA2 P.acn31 chromosome, completeDNA-binding protein, YbaB/EbfC family1e-0858.2
NC_014039:261126:282248282248282571324Propionibacterium acnes SK137 chromosome, complete genomeDNA-binding protein, YbaB/EbfC family1e-0858.2
NC_008800:3330944:336337833633783363710333Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein2e-0857.8
NC_015224:1391088:139376113937611394093333Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein2e-0857.8
NC_011134:311360:316121316121316420300Streptococcus equi subsp. zooepidemicus str. MGCS10565, completehypothetical protein3e-0857
NC_009715:1877825:187892518789251879242318Campylobacter curvus 525.92 chromosome, complete genomehypothetical protein7e-0855.8
NC_007333:39579:466824668247032351Thermobifida fusca YX, complete genomeConserved hypothetical protein 1039e-0855.5
NC_016111:2402891:242251024225102422896387Streptomyces cattleya NRRL 8057, complete genomehypothetical protein1e-0755.1
NC_009662:222964:243604243604243915312Nitratiruptor sp. SB155-2, complete genomehypothetical protein5e-0753.1
NC_008599:29000:524525245252763312Campylobacter fetus subsp. fetus 82-40, complete genomehypothetical protein7e-0752.8
NC_007575:319119:334303334303334611309Sulfurimonas denitrificans DSM 1251, complete genomehypothetical protein2e-0651.2
NC_002967:1589069:159197515919751592262288Treponema denticola ATCC 35405, complete genomeconserved hypothetical protein TIGR001033e-0650.4
NC_011025:134292:153406153406153693288Mycoplasma arthritidis 158L3-1, complete genomehypothetical protein7e-0649.3