Pre_GI Gene

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Host: NC_009092 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_009092:2589000 Shewanella loihica PV-4, complete genome

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
258900525916442640signal transduction histidine kinase regulating citratemalate metabolismQuickGO ontologyBLASTP
25917032592629927protein of unknown function DUF785QuickGO ontologyBLASTP
25926882593062375hypothetical proteinBLASTP
25930802593373294hypothetical protein
25934672593817351hypothetical proteinBLASTP
25939372594524588YceI family proteinQuickGO ontologyBLASTP
259470025973962697DNA topoisomerase IQuickGO ontologyBLASTP
259770725990441338Succinylarginine dihydrolaseQuickGO ontologyBLASTP
259968326021422460Ig domain protein group 1 domain proteinQuickGO ontologyBLASTP
260235926036781320sodiumdicarboxylate symporterQuickGO ontologyBLASTP
260381626051201305Inosine kinaseQuickGO ontologyBLASTP
260531826063311014FerrochelataseQuickGO ontologyBLASTP
26064682607112645adenylate kinaseQuickGO ontologyBLASTP
26076562608495840thioredoxin domain proteinQuickGO ontologyBLASTP
260861626105351920heat shock protein Hsp90QuickGO ontologyBLASTP
26106912611290600recombination protein RecRQuickGO ontologyBLASTP
26112932611622330conserved hypothetical protein 103QuickGO ontologyBLASTP
261184526151863342DNA polymerase III subunits gamma and tauQuickGO ontologyBLASTP