Pre_GI: BLASTP Hits

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Query: NC_013198:298000:311420 Lactobacillus rhamnosus GG, complete genome

Start: 311420, End: 311719, Length: 300

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013199:811929:821463821463821762300Lactobacillus rhamnosus Lc 705, complete genomelipoprotein2e-51200
NC_013198:813830:826913826913827212300Lactobacillus rhamnosus GG, complete genomelipoprotein2e-51200
NC_013198:1921500:192679019267901927089300Lactobacillus rhamnosus GG, complete genomelipoprotein2e-51200
NC_013199:282901:293446293446293745300Lactobacillus rhamnosus Lc 705, complete genomelipoprotein2e-51200
NC_013199:1886271:189307318930731893372300Lactobacillus rhamnosus Lc 705, complete genomelipoprotein2e-51200
NC_013199:2536705:254574125457412546040300Lactobacillus rhamnosus Lc 705, complete genomelipoprotein2e-51200
NC_005303:272915:282933282933283574642Onion yellows phytoplasma OY-M, complete genomehypothetical protein4e-31133
NC_005303:553500:560877560877561518642Onion yellows phytoplasma OY-M, complete genomehypothetical protein4e-31133
NC_012563:36000:530115301153667657Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein8e-31132
NC_012563:36000:608806088061536657Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein8e-31132
NC_012563:36000:464554645547111657Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein8e-31132
NC_012563:36000:678856788568541657Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein8e-31132
NC_012563:4004709:401469040146904015346657Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein7e-31132
NC_012563:4004709:401992940199294020585657Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein7e-31132
NC_012563:519037:531896531896532552657Clostridium botulinum A2 str. Kyoto, complete genomehypothetical protein7e-31132
NC_007716:467235:493710493710494351642Aster yellows witches'-broom phytoplasma AYWB, complete genomehypothetical protein1e-30131
NC_007716:266500:275273275273275914642Aster yellows witches'-broom phytoplasma AYWB, complete genomehypothetical protein1e-30131
NC_004557:1:593859386594657Clostridium tetani E88, complete genomehypothetical protein3e-28123
NC_004557:558500:568913568913569569657Clostridium tetani E88, complete genomehypothetical protein3e-28123
NC_004557:162670:179742179742180398657Clostridium tetani E88, complete genomehypothetical protein3e-28123
NC_004557:32094:390243902439680657Clostridium tetani E88, complete genomehypothetical protein3e-28123
NC_008593:2457594:247261824726182473259642Clostridium novyi NT, complete genomehypothetical protein2e-27121
NC_008593:2457594:248788224878822488523642Clostridium novyi NT, complete genomehypothetical protein2e-27121
NC_008593:2457594:249869024986902499331642Clostridium novyi NT, complete genomehypothetical protein2e-27121
NC_008593:1917118:194676319467631947404642Clostridium novyi NT, complete genomehypothetical protein2e-27121
NC_008593:2527064:253403825340382534679642Clostridium novyi NT, complete genomehypothetical protein2e-27121
NC_008593:2020473:202841420284142029055642Clostridium novyi NT, complete genomehypothetical protein2e-27121
NC_008593:1917118:192431119243111924952642Clostridium novyi NT, complete genomehypothetical protein2e-27121
NC_008593:2457594:246534424653442465985642Clostridium novyi NT, complete genomehypothetical protein2e-27120
NC_008593:1797000:180582818058281806469642Clostridium novyi NT, complete genomehypothetical protein2e-27120
NC_008277:428926:4375334375334404662934Borrelia afzelii PKo, complete genome28S ribosomal RNA2e-23107
NC_008277:428926:4407704407704437032934Borrelia afzelii PKo, complete genome28S ribosomal RNA2e-23107
NC_006156:427358:4392234392234421562934Borrelia garinii PBi chromosome linear, complete sequence28S ribosomal RNA2e-23107
NC_006156:427358:4359794359794389122934Borrelia garinii PBi chromosome linear, complete sequence28S ribosomal RNA2e-23107
NC_012438:1514376:152296815229681523519552Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomehypothetical protein6e-23106
NC_012438:818387:830489830489831040552Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomehypothetical protein6e-23106
NC_005956:1402500:140973714097371410072336Bartonella henselae str. Houston-1, complete genome7e-22102
NC_005956:1572500:157974615797461580081336Bartonella henselae str. Houston-1, complete genome7e-22102
NC_010125:2998619:3008190300819030108092620Gluconacetobacter diazotrophicus PAl 5, complete genome23S ribosomal RNA7e-2095.9
NC_011144:1264871:1274525127452512773112787Phenylobacterium zucineum HLK1, complete genome23S ribosomal RNA2e-1891.3
NC_012440:1080675:109475510947551095324570Persephonella marina EX-H1, complete genomehypothetical protein3e-1890.5
NC_012440:1841315:184986418498641850433570Persephonella marina EX-H1, complete genomehypothetical protein3e-1890.5
NC_017059:31564:533595335954138780Rhodospirillum photometricum DSM 122, complete genomePutative glycosyl transferase (Glycosyl transferase family 2)5e-1889.7
NC_004369:2968251:298740729874072987607201Corynebacterium efficiens YS-314, complete genomehypothetical protein5e-1270.1
NC_004369:2968251:297853229785322979317786Corynebacterium efficiens YS-314, complete genomehypothetical protein9e-1268.9