Pre_GI Gene

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Host: NC_013199 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_013199:1886271 Lactobacillus rhamnosus Lc 705, complete genome

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
188495318862871335ferrous iron transport and uptake protein BQuickGO ontologyBLASTP
18862711887056786ferrous iron transport protein B GTP-bindingQuickGO ontologyBLASTP
18870491887540492Fe2 transport system protein AQuickGO ontologyBLASTP
18877501888508759acyltransferaseQuickGO ontologyBLASTP
18887581889261504hypothetical proteinBLASTP
18899771890615639NADH-flavin reductase saccharopine dehydrogenase oxidoreductase proteinQuickGO ontologyBLASTP
18906521891140489hypothetical proteinBLASTP
18912071891731525hypothetical proteinBLASTP
18919781892103126hypothetical proteinBLASTP
18925971892935339metal-dependent RNase consists of a metallo-beta-lactamase domain and an RNA-binding KH domainQuickGO ontologyBLASTP
18930731893372300lipoproteinQuickGO ontologyBLASTP
18942871894682396hypothetical proteinBLASTP
18950891895301213hypothetical proteinBLASTP
18955231895888366hypothetical proteinBLASTP
18961751896369195hypothetical proteinBLASTP
18963541896671318hypothetical proteinBLASTP
18966251896828204hypothetical proteinBLASTP
18967791896964186hypothetical proteinBLASTP
189764118989241284seryl-tRNA synthetase Seryl-tRNASerSec synthetase Serine-tRNA ligase SerRSQuickGO ontologyBLASTP
189936719009441578hypothetical proteinBLASTP
190132319028491527hypothetical proteinBLASTP
190297819044411464amino acid transporter lysine-specific permease lysP APC familyQuickGO ontologyBLASTP
19044841904801318predicted ORFQuickGO ontologyBLASTP
19048671905019153predicted ORFQuickGO ontologyBLASTP
19050981905808711acetolactate decarboxylase Alpha-acetolactate decarboxylaseQuickGO ontologyBLASTP
19059151906022108predicted ORFQuickGO ontology
190616019078361677acetolactate synthase large subunit IlvB1_1QuickGO ontologyBLASTP