Pre_GI: BLASTP Hits

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Query: NC_012917:569856:587452 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 587452, End: 587784, Length: 333

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:667988:692627692627692962336Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeperiplasmic divalent cation tolerance protein1e-56218
NC_012912:4012112:401352840135284013908381Dickeya zeae Ech1591, complete genomeCutA1 divalent ion tolerance protein3e-44176
NC_013592:577831:594646594646595026381Dickeya dadantii Ech586, complete genomeCutA1 divalent ion tolerance protein1e-43174
NC_012880:3982383:398379139837913984123333Dickeya dadantii Ech703, complete genomeCutA1 divalent ion tolerance protein1e-40164
NC_006155:456000:478136478136478495360Yersinia pseudotuberculosis IP 32953, complete genomeputative cation tolerance protein5e-39159
NC_005810:515744:537587537587537946360Yersinia pestis biovar Microtus str. 91001, complete genomedivalent-cation tolerance protein CutA5e-39159
NC_009832:426993:453817453817454140324Serratia proteamaculans 568, complete genomeCutA1 divalent ion tolerance protein7e-39159
NC_020211:379000:399860399860400183324Serratia marcescens WW4, complete genomedivalent-cation tolerance protein, copper sensitivity3e-38156
NC_021066:3703725:370512137051213705444324Raoultella ornithinolytica B6, complete genomedivalent-cation tolerance protein CutA3e-38156
NC_014618:4312295:431527743152774315624348Enterobacter cloacae SCF1 chromosome, complete genomeCutA1 divalent ion tolerance protein1e-37155
NC_017046:4571833:458830345883034588656354Salmonella enterica subsp. enterica serovar Typhimurium str. 798periplasmic divalent cation tolerance protein CutA2e-37154
NC_016857:4573173:458964345896434589996354Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74periplasmic divalent cation tolerance protein CutA2e-37154
NC_015663:1902344:192893819289381929261324Enterobacter aerogenes KCTC 2190 chromosome, complete genomedivalent-cation tolerance protein CutA4e-37153
NC_003198:4513900:454555545455554545902348Salmonella enterica subsp. enterica serovar Typhi str. CT18,periplasmic divalent cation tolerance protein CutA3e-37153
NC_006905:4486433:450376245037624504109348Salmonella enterica subsp. enterica serovar Choleraesuis strputative periplasmic divalent cation tolerance protein; cytochrome c biogenesis3e-37153
NC_011080:4543000:456847045684704568817348Salmonella enterica subsp. enterica serovar Newport str. SL254,divalent-cation tolerance protein CutA3e-37153
NC_003197:4551880:456906145690614569408348Salmonella typhimurium LT2, complete genomeputative periplasmic divalent cation tolerance protein3e-37153
NC_011147:4297513:431448743144874314834348Salmonella enterica subsp. enterica serovar Paratyphi A strdivalent-cation tolerance protein CutA3e-37153
NC_011205:4564645:458157445815744581921348Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853divalent-cation tolerance protein CutA3e-37153
NC_011274:4385039:440225944022594402606348Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91divalent-cation tolerance protein CutA3e-37153
NC_011294:4409137:442435544243554424702348Salmonella enterica subsp. enterica serovar Enteritidis strdivalent-cation tolerance protein CutA3e-37153
NC_016863:4513106:452949845294984529845348Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1divalent-cation tolerance protein CutA3e-37153
NC_016860:4649274:466645546664554666802348Salmonella enterica subsp. enterica serovar Typhimurium strdivalent-cation tolerance protein CutA3e-37153
NC_016856:4563435:458189245818924582239348Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sdivalent-cation tolerance protein CutA3e-37153
NC_016831:4367000:438240443824044382751348Salmonella enterica subsp. enterica serovar Gallinarum/pullorumperiplasmic divalent cation tolerance protein CutA3e-37153
NC_016810:4573172:458964245896424589989348Salmonella enterica subsp. enterica serovar Typhimurium strperiplasmic divalent cation tolerance protein CutA3e-37153
NC_015761:4188250:421764142176414217988348Salmonella bongori NCTC 12419, complete genomeperiplasmic divalent cation tolerance protein CutA3e-37153
NC_010067:3204682:320435932043593204706348Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-37152
NC_004431:4955658:497405249740524974396345Escherichia coli CFT073, complete genomePeriplasmic divalent cation tolerance protein cutA9e-37152
NC_011745:4862218:488366648836664884004339Escherichia coli ED1a chromosome, complete genomedivalent-cation tolerance protein CutA1e-36151
AP010958:5090696:512235051223505122688339Escherichia coli O103:H2 str. 12009 DNA, complete genomecopper binding protein CutA, copper sensitivity1e-36151
NC_011748:4792703:481059048105904810928339Escherichia coli 55989, complete genomedivalent-cation tolerance protein CutA1e-36151
CU928145:4792703:481059048105904810928339Escherichia coli 55989 chromosome, complete genomecopper binding protein, copper sensitivity1e-36151
NC_013353:5090696:512235051223505122688339Escherichia coli O103:H2 str. 12009, complete genomecopper binding protein CutA, copper sensitivity1e-36151
NC_013956:455000:468806468806469120315Pantoea ananatis LMG 20103 chromosome, complete genomeCutA1e-35148
NC_007712:532500:548570548570548944375Sodalis glossinidius str. 'morsitans', complete genomeputative cation tolerance protein2e-33140
NC_013850:4993307:501729550172955017618324Klebsiella variicola At-22 chromosome, complete genomeCutA1 divalent ion tolerance protein8e-33138
NC_011283:5170683:519523551952355195558324Klebsiella pneumoniae 342 chromosome, complete genomedivalent-cation tolerance protein CutA8e-33138
NC_014541:475350:530735530735531082348Ferrimonas balearica DSM 9799 chromosome, complete genomeCutA1 divalent ion tolerance protein2e-21100
NC_003902:624828:627140627140627472333Xanthomonas campestris pv. campestris str. ATCC 33913, completeperiplasmic divalent cation tolerance protein5e-2096.3
NC_010688:605018:607330607330607662333Xanthomonas campestris pv. campestris, complete genomehypothetical protein5e-2096.3
NC_007086:626891:629203629203629535333Xanthomonas campestris pv. campestris str. 8004, complete genomeperiplasmic divalent cation tolerance protein5e-2096.3
NC_010172:573046:598802598802599125324Methylobacterium extorquens PA1, complete genomeCutA1 divalent ion tolerance protein3e-1890.5
NC_005061:65861:737027370274061360Candidatus Blochmannia floridanus, complete genomeperiplasmic divalent cation tolerance protein CutA2e-1787.8
NC_016111:986936:990910990910991239330Streptomyces cattleya NRRL 8057, complete genomeDivalent-cation tolerance protein cutA1e-1685.5
NC_010730:813534:817405817405817719315Sulfurihydrogenibium sp. YO3AOP1, complete genomeCutA1 divalent ion tolerance protein2e-1684.7
NC_015931:1405859:142422214242221424539318Pyrolobus fumarii 1A, complete genomeCutA1 divalent ion tolerance protein4e-1683.2
NC_000961:888000:901963901963902271309Pyrococcus horikoshii OT3, complete genomeperiplasmic divalent cation tolerance protein CutA4e-1477
NC_000917:1778173:177868017786801778988309Archaeoglobus fulgidus DSM 4304, complete genomeperiplasmic divalent cation tolerance protein (cutA)6e-1475.9
NC_015185:1414453:141769814176981418006309Desulfurobacterium thermolithotrophum DSM 11699 chromosome,2e-1374.3
NC_015562:1460124:149887614988761499184309Methanotorris igneus Kol 5 chromosome, complete genomeCutA1 divalent ion tolerance protein3e-1373.9
NC_014820:1057826:107455910745591074888330Cenarchaeum symbiosum A, complete genomeuncharacterized protein involved in tolerance to divalent cations4e-1166.6
NC_016930:228000:233531233531233845315Rickettsia philipii str. 364D chromosome, complete genomedivalent cation tolerance protein8e-1165.9
NC_017028:316000:318761318761319075315Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completedivalent cation tolerance protein7e-1165.9
NC_007940:1178000:118365811836581183972315Rickettsia bellii RML369-C, complete genomePeriplasmic divalent cation tolerance protein2e-1064.3
NC_009883:343067:358169358169358483315Rickettsia bellii OSU 85-389, complete genomePeriplasmic divalent cation tolerance protein2e-1064.3
NC_010263:232482:235594235594235908315Rickettsia rickettsii str. Iowa, complete genomeperiplasmic divalent cation tolerance protein3e-1063.9
NC_009882:232400:235500235500235814315Rickettsia rickettsii str. 'Sheila Smith', complete genomePeriplasmic divalent cation tolerance protein3e-1063.9
NC_016909:230000:235454235454235768315Rickettsia rickettsii str. Arizona chromosome, complete genomedivalent cation tolerance protein3e-1063.9
NC_016911:232481:235542235542235856315Rickettsia rickettsii str. Hauke chromosome, complete genomedivalent cation tolerance protein3e-1063.9
NC_016913:917500:933206933206933520315Rickettsia rickettsii str. Brazil chromosome, complete genomedivalent cation tolerance protein3e-1063.9
NC_016914:231324:235681235681235995315Rickettsia rickettsii str. Hino chromosome, complete genomedivalent cation tolerance protein3e-1063.9
NC_012730:332500:347792347792348106315Rickettsia peacockii str. Rustic, complete genomeperiplasmic divalent cation tolerance protein3e-1063.5
NC_003103:225956:231723231723232037315Rickettsia conorii str. Malish 7, complete genomeperiplasmic divalent cation tolerance protein5e-1063.2
NC_016050:236000:238725238725239039315Rickettsia japonica YH, complete genomeperiplasmic divalent cation tolerance protein5e-1063.2
NC_015866:233448:237780237780238094315Rickettsia heilongjiangensis 054 chromosome, complete genomeperiplasmic divalent cation tolerance protein5e-1063.2
NC_016931:232981:236041236041236355315Rickettsia massiliae str. AZT80 chromosome, complete genomedivalent cation tolerance protein7e-1062.4
NC_017042:310000:316340316340316654315Rickettsia rhipicephali str. 3-7-female6-CWPP chromosome, completedivalent cation tolerance protein2e-0961.2
NC_017048:547712:553880553880554329450Rickettsia prowazekii str. GvV257 chromosome, complete genomehypothetical protein3e-0960.8
NC_017049:203748:209914209914210363450Rickettsia prowazekii str. Chernikova chromosome, complete genomehypothetical protein3e-0960.8
NC_017050:205547:211713211713212162450Rickettsia prowazekii str. Katsinyian chromosome, complete genomehypothetical protein3e-0960.8
NC_017051:203752:209918209918210367450Rickettsia prowazekii str. Dachau chromosome, complete genomehypothetical protein3e-0960.8
NC_017056:205558:211724211724212173450Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomehypothetical protein3e-0960.8
NC_017057:205771:211939211939212388450Rickettsia prowazekii str. RpGvF24 chromosome, complete genomehypothetical protein3e-0960.8
NC_000963:205546:211712211712212161450Rickettsia prowazekii str. Madrid E, complete genomehypothetical protein3e-0960.8
NC_009900:231983:238426238426238740315Rickettsia massiliae MTU5, complete genomePeriplasmic divalent cation tolerance protein4e-0960.1
NC_017058:1200500:121555612155561215870315Rickettsia australis str. Cutlack chromosome, complete genomedivalent cation tolerance protein7e-0959.3
NC_009879:200419:215924215924216388465Rickettsia canadensis str. McKiel, complete genomePeriplasmic divalent cation tolerance protein9e-0958.9
NC_016929:197403:216911216911217375465Rickettsia canadensis str. CA410 chromosome, complete genomedivalent cation tolerance protein1e-0858.5
NC_009881:236500:239448239448239762315Rickettsia akari str. Hartford, complete genomePeriplasmic divalent cation tolerance protein1e-0858.2
NC_013595:9994000:100052341000523410005566333Streptosporangium roseum DSM 43021, complete genomehypothetical protein2e-0858.2
NC_013929:3600343:362055936205593620882324Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-0858.2
NC_014165:374674:382067382067382399333Thermobispora bispora DSM 43833 chromosome, complete genomeCutA1 divalent ion tolerance protein2e-0857.8
NC_012416:852000:853898853898854155258Wolbachia sp. wRi, complete genomeperiplasmic divalent cation tolerance protein3e-0753.9
NC_015580:3834244:385807538580753858407333Novosphingobium sp. PP1Y, complete genomeperiplasmic divalent cation tolerance protein7e-0752.8