Pre_GI Gene

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Host: NC_006905 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006905:4486433 Salmonella enterica subsp. enterica serovar Choleraesuis str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
448643344888622430putative anaerobic dimethyl sulfoxide reductase subunit AQuickGO ontologyBLASTP
44888764489502627putative anaerobic dimethyl sulfoxide reductase subunit BQuickGO ontologyBLASTP
44894954490268774putative anaerobic dimethyl sulfoxide reductase subunit CQuickGO ontologyBLASTP
44902844490937654putative component of anaerobic dehydrogenaseQuickGO ontologyBLASTP
449102144924211401putative periplasmic or exported proteinQuickGO ontologyBLASTP
44927254493630906putative inner membrane proteinQuickGO ontologyBLASTP
44941444494533390putative cytoplasmic proteinQuickGO ontologyBLASTP
44945564494843288putative bacterial regulatory proteins luxR familyQuickGO ontologyBLASTP
44948404495715876putative AraC-type DNA-binding domain-containing proteinQuickGO ontologyBLASTP
44959814496202222putative cytoplasmic proteinQuickGO ontologyBLASTP
44965124496820309Transposase insF for insertion sequence IS3ABCDQuickGO ontologyBLASTP
44973854497585201hypothetical proteinBLASTP
44975544498540987putative periplasmic proteinQuickGO ontologyBLASTP
44986294498808180TnpAQuickGO ontologyBLASTP
44998174500569753non-specific acid phosphataseQuickGO ontologyBLASTP
45006124500746135ail and ompX HomologQuickGO ontologyBLASTP
45009684501111144hypothetical proteinBLASTP
4501280450135576tRNA-PheQuickGO ontologyBLASTP
45014714502046576putative bacterial regulatory protein merR familyQuickGO ontologyBLASTP
450208345037861704thioldisulfide interchange protein precursorQuickGO ontologyBLASTP
45037624504109348putative periplasmic divalent cation tolerance protein cytochrome c biogenesisQuickGO ontologyBLASTP
450423045055311302anaerobic C4-dicarboxylate transporterQuickGO ontologyBLASTP
450564645070821437aspartate ammonia-lyase aspartaseQuickGO ontologyBLASTP
45071154507237123hypothetical proteinBLASTP
45074234507899477suppresses F exclusion of bacteriophage T7QuickGO ontologyBLASTP
450795845091991242putative transporter cytoplasmic membrane proteinQuickGO ontologyBLASTP