Pre_GI: BLASTP Hits

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Query: NC_012125:1330066:1353418 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 1353418, End: 1353885, Length: 468

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011751:643976:663770663770664249480Escherichia coli UMN026 chromosome, complete genomeEndopeptidase from phage origin1e-67254
NC_011740:2072173:210037421003742100853480Escherichia fergusonii ATCC 35469, complete genomeEndopeptidase from phage origin (Lysis protein Rz)2e-65247
NC_011205:609464:635672635672636142471Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853bacteriophage lysis protein8e-64242
NC_011147:2496808:250358625035862504053468Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein8e-56215
NC_006511:2501500:250805025080502508499450Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-55214
NC_011283:2836000:289710628971062897570465Klebsiella pneumoniae 342 chromosome, complete genomebacteriophage lysis protein8e-53205
NC_020063:2565605:257162125716212572103483Enterobacteriaceae bacterium strain FGI 57, complete genomeBacteriophage lysis protein2e-50197
NC_010067:2304313:232553223255322326428897Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-43172
NC_007384:2933625:293316429331642933628465Shigella sonnei Ss046, complete genomeendopeptidase-like protein1e-41168
NC_017046:2756000:275602427560242756497474Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein1e-41168
NC_011740:2769961:277523827752382775711474Escherichia fergusonii ATCC 35469, complete genomeputative murein endopeptidase; DLP12 prophage2e-41167
NC_012947:3015985:301598530159853016446462Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelysis protein1e-40165
NC_011415:1472500:149739714973971497861465Escherichia coli SE11 chromosome, complete genomeputative phage endopeptidase3e-40163
NC_013941:699286:716243716243716716474Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeRz endopeptidase from lambdoid prophage DLP124e-40163
NC_013361:3112023:311748531174853117946462Escherichia coli O26:H11 str. 11368 chromosome, complete genomeendopeptidase6e-40162
NC_008563:1475500:148489514848951485371477Escherichia coli APEC O1, complete genomehypothetical protein6e-40162
NC_011742:1177946:119983111998311200292462Escherichia coli S88 chromosome, complete genomemurein endopeptidase; DLP12 prophage1e-39161
NC_008563:1175035:119629711962971196770474Escherichia coli APEC O1, complete genomeputative Rz endopeptidase from lambdoid prophage2e-39161
NC_007946:1239278:125891012589101259383474Escherichia coli UTI89, complete genomeputative Rz endopeptidase from lambdoid prophage DLP122e-39161
NC_012947:2366000:237736123773612377825465Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelysis protein2e-39161
NC_012967:531000:549576549576550037462Escherichia coli B str. REL606 chromosome, complete genomeputative murein endopeptidase5e-39159
NC_012947:3231893:323564232356423236103462Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelysis protein5e-39159
NC_011083:374000:393885393885394322438Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,bacteriophage lysis protein3e-34144
NC_006905:368942:392143392143392580438Salmonella enterica subsp. enterica serovar Choleraesuis strRz lysis protein2e-34144
NC_011205:1345511:137223813722381372738501Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853bacteriophage lysis protein3e-34143
NC_016831:1734292:174088017408801741359480Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative phage lysozyme7e-34142
NC_011294:1220526:123638912363891236868480Salmonella enterica subsp. enterica serovar Enteritidis strphage lysozyme7e-34142
CU928145:824367:838985838985839434450Escherichia coli 55989 chromosome, complete genomebacteriophage lysis protein2e-33141
NC_011748:824367:838985838985839434450Escherichia coli 55989, complete genomebacteriophage lysis protein2e-33141
NC_011748:1408280:142983614298361430309474Escherichia coli 55989, complete genomeEndopeptidase (Lysis protein Rz)1e-33141
CU928145:1408280:142983614298361430309474Escherichia coli 55989 chromosome, complete genomeEndopeptidase (Lysis protein Rz)1e-33141
NC_017328:303987:326072326072326509438Shigella flexneri 2002017 chromosome, complete genomeRz protein2e-33140
NC_013364:2898964:290746329074632907900438Escherichia coli O111:H- str. 11128, complete genomeputative endopeptidase8e-33139
NC_009436:2776410:281037328103732810834462Enterobacter sp. 638, complete genomebacteriophage lysis protein3e-31134
NC_000913:558920:577330577330577791462Escherichia coli K12, complete genomeDLP12 prophage; predicted murein endopeptidase2e-31134
NC_010473:498252:516662516662517123462Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted murein endopeptidase2e-31134
NC_010473:623810:629922629922630383462Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted murein endopeptidase2e-31134
AC_000091:558920:577330577330577791462Escherichia coli W3110 DNA, complete genomepredicted murein endopeptidase2e-31134
NC_012759:461680:480090480090480551462Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative murein endopeptidase2e-31134
NC_011748:1773642:178211417821141782578465Escherichia coli 55989, complete genomeputative murein endopeptidase; DLP12 prophage1e-27121
CU928145:1773642:178211417821141782578465Escherichia coli 55989 chromosome, complete genomeputative murein endopeptidase; DLP12 prophage1e-27121
NC_014121:3627588:365891236589123659370459Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completebacteriophage lysis protein2e-26118
NC_009800:289000:309952309952310389438Escherichia coli HS, complete genomebacteriophage lysis protein4e-26116
NC_010067:2529750:257967425796742580111438Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-26116
NC_011353:2957962:295885129588512959318468Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage lysis protein2e-25114
NC_013364:3312379:333608333360833336550468Escherichia coli O111:H- str. 11128, complete genomeputative endopeptidase2e-25114
NC_013008:2910567:291361829136182914085468Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeendopeptidase of prophage CP-933U2e-23108
NC_002695:1929215:194614119461411946608468Escherichia coli O157:H7 str. Sakai, complete genomeputative endopeptidase2e-23108
NC_014562:1772842:177839417783941778870477Pantoea vagans C9-1 chromosome, complete genomeputative endopeptidase1e-2099
NC_016816:1970189:199332319933231993823501Pantoea ananatis LMG 5342, complete genomeputative phage endopeptidase5e-1786.7
NC_010473:1493983:151076515107651511064300Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage; predicted defective peptidase7e-1579.7
NC_000913:1404000:142136914213691421668300Escherichia coli K12, complete genomeRac prophage; predicted defective peptidase7e-1579.7
AC_000091:1407693:142505914250591425358300Escherichia coli W3110 DNA, complete genomepredicted defective peptidase7e-1579.7
NC_012967:1403733:141822514182251418524300Escherichia coli B str. REL606 chromosome, complete genomeputative defective peptidase7e-1579.7
NC_013892:2005480:200921120092112009678468Xenorhabdus bovienii SS-2004 chromosome, complete genomeendopeptidase (Protein gp15)9e-1579.3
NC_013892:671000:689248689248689727480Xenorhabdus bovienii SS-2004 chromosome, complete genomeRac prophage; prophage lambda endopeptidase4e-1477
NC_016514:2476359:249623824962382496627390Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein1e-1168.9
NC_015663:4767443:477305747730574773434378Enterobacter aerogenes KCTC 2190 chromosome, complete genomelysis protein6e-1166.6
NC_013850:1887556:191145119114511911828378Klebsiella variicola At-22 chromosome, complete genomelysis protein9e-1062.4
NC_013282:1804909:182556518255651826029465Cronobacter turicensis, complete genomeEndopeptidase8e-0959.3
NC_016845:1285435:130611013061101306499390Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein7e-0649.7