Pre_GI: BLASTP Hits

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Query: NC_011769:3434744:3461723 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 3461723, End: 3462703, Length: 981

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013223:1349000:136377313637731364735963Desulfohalobium retbaense DSM 5692, complete genomeType II secretion system F domain protein4e-56218
NC_016002:2453919:249679124967912497735945Pseudogulbenkiania sp. NH8B, complete genometype II secretion system F domain containing protein7e-53207
NC_007614:2675302:267892526789252679866942Nitrosospira multiformis ATCC 25196 chromosome 1, completetype II secretion system protein5e-49195
NC_011027:1570955:160123816012381602179942Chlorobaculum parvum NCIB 8327, complete genometype II secretion system protein1e-46186
NC_002932:440191:456262456262457200939Chlorobium tepidum TLS, complete genomeTadC protein2e-44179
NC_008609:2933468:293861629386162939524909Pelobacter propionicus DSM 2379, complete genometype II secretion system protein2e-40166
NC_007498:2046935:205190820519082052888981Pelobacter carbinolicus DSM 2380, complete genomeFlp pilus assembly protein TadC6e-40164
NC_008536:5259438:527477652747765275690915Solibacter usitatus Ellin6076, complete genometype II secretion system protein1e-37157
NC_016613:2759908:277352227735222774481960Vibrio sp. EJY3 chromosome 1, complete sequencetight adherence TadC-like transmembrane protein9e-37154
NC_009901:2427291:244682424468242447786963Shewanella pealeana ATCC 700345, complete genometype II secretion system protein1e-35150
NC_018867:361423:379126379126380067942Dehalobacter sp. CF chromosome, complete genomeType II/IV secretion system protein TadC, associated with Flp pilus assembly3e-35149
NC_010334:2749250:275649927564992757461963Shewanella halifaxensis HAW-EB4, complete genometype II secretion system protein4e-35149
NC_010718:2460893:246133624613362462289954Natranaerobius thermophilus JW/NM-WN-LF, complete genometype II secretion system protein2e-32140
NC_007794:1553000:156879815687981569766969Novosphingobium aromaticivorans DSM 12444, complete genometype II secretion system protein4e-32139
NC_014830:532122:547017547017547937921Intrasporangium calvum DSM 43043 chromosome, complete genomeType II secretion system F domain1e-31137
NC_015588:95697:109575109575110474900Isoptericola variabilis 225 chromosome, complete genomeType II secretion system F domain protein3e-31135
NC_010338:4530403:455221745522174553203987Caulobacter sp. K31, complete genometype II secretion system protein6e-31134
NC_015565:1281397:129990312999031300835933Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeType II secretion system F domain-containing protein8e-31134
NC_011886:2950411:297348229734822974357876Arthrobacter chlorophenolicus A6, complete genometype II secretion system protein3e-30132
NC_011886:2950411:298086429808642981748885Arthrobacter chlorophenolicus A6, complete genometype II secretion system protein7e-28124
NC_011894:2618951:265844826584482659359912Methylobacterium nodulans ORS 2060, complete genometype II secretion system protein1e-27124
NC_009485:1604942:160494216049421605904963Bradyrhizobium sp. BTAi1 chromosome, complete genomehypothetical protein3e-27122
NC_008541:3282415:330434633043463305230885Arthrobacter sp. FB24 chromosome 1, complete sequencetype II secretion system protein7e-25114
NC_021171:4549673:456038545603854561314930Bacillus sp. 1NLA3E, complete genometype II secretion system protein1e-24114
NC_008786:266959:271953271953272894942Verminephrobacter eiseniae EF01-2, complete genometype II secretion system protein2e-24113
NC_004463:3857763:386687838668783867786909Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein5e-22105
NC_008541:3282415:329669132966913297569879Arthrobacter sp. FB24 chromosome 1, complete sequencetype II secretion system protein5e-2098.6
NC_014152:397177:400594400594401553960Thermincola sp. JR, complete genomeType II secretion system F domain protein2e-1893.6
NC_006512:952894:956124956124956837714Idiomarina loihiensis L2TR, complete genomeFlp pilus assembly protein TadC2e-1790.1
NC_014931:5594946:560481956048195605769951Variovorax paradoxus EPS chromosome, complete genomeType II secretion system F domain2e-1686.7
NC_016884:813000:822248822248823177930Sulfobacillus acidophilus DSM 10332 chromosome, complete genometype II secretion system F domain-containing protein4e-1685.5
NC_015757:2844599:285508828550882856017930Sulfobacillus acidophilus TPY chromosome, complete genomeType II secretion system F domain protein4e-1685.5
NC_013385:759420:776509776509777318810Ammonifex degensii KC4, complete genomeType II secretion system F domain protein5e-1582
NC_012791:4680500:469057746905774691536960Variovorax paradoxus S110 chromosome 1, complete genometype II secretion system protein7e-1581.6
NC_015145:2693749:269374926937492694690942Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genomeFlp pilus assembly protein TadB3e-1169.3
NC_007333:2674596:268098926809892681810822Thermobifida fusca YX, complete genomeputative integral membrane protein1e-1067.4
NC_003888:5443832:544821354482135449115903Streptomyces coelicolor A3(2), complete genomeintegral membrane protein3e-1066.2
NC_008541:2989500:299245129924512993392942Arthrobacter sp. FB24 chromosome 1, complete sequencetype II secretion system protein3e-1066.2
NC_011886:2696671:269797626979762698914939Arthrobacter chlorophenolicus A6, complete genometype II secretion system protein3e-1066.2
NC_013716:4306695:437314943731494374000852Citrobacter rodentium ICC168, complete genomeputative tight adherence protein C1e-0963.9
NC_010617:988758:100932010093201010264945Kocuria rhizophila DC2201, complete genomehypothetical protein4e-0962.4
NC_015594:332432:337222337222338085864Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeType II secretion system F domain-containing protein4e-0962.4
NC_014151:1373937:138417813841781385107930Cellulomonas flavigena DSM 20109 chromosome, complete genomeType II secretion system F domain protein8e-0961.6
NC_013165:2240377:226291122629112263528618Slackia heliotrinireducens DSM 20476, complete genomeFlp pilus assembly protein TadC2e-0860.1
NC_014966:638355:653937653937654815879Vibrio vulnificus MO6-24/O chromosome II, complete sequencetype II/IV secretion system protein TadC, associated with Flp pilus assembly2e-0859.7
NC_013947:6221877:622899262289926229654663Stackebrandtia nassauensis DSM 44728 chromosome, complete genometype II secretion system protein3e-0859.7
NC_012913:167034:175091175091175957867Aggregatibacter aphrophilus NJ8700, complete genomeTadC4e-0859.3
NC_013416:668152:679472679472680338867Aggregatibacter actinomycetemcomitans D11S-1, complete genomeTadC5e-0858.9
NC_016513:974402:985732985732986598867Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeFlp pilus assembly protein TadC5e-0858.9
NC_004605:741000:757085757085757951867Vibrio parahaemolyticus RIMD 2210633 chromosome II, completeputative TadC8e-0858.2
NC_005140:660305:675959675959676837879Vibrio vulnificus YJ016 chromosome II, complete sequenceFlp pilus assembly protein TadC1e-0757.4
NC_015224:3820338:384678638467863847610825Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative tight adherance operon protein2e-0756.6
NC_018867:361423:380079380079381026948Dehalobacter sp. CF chromosome, complete genomeFlp pilus assembly protein TadB5e-0755.5
NC_008800:3955284:396851239685123969336825Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative tight adherance operon protein6e-0755.1
NC_010465:733916:741391741391742224834Yersinia pseudotuberculosis YPIII, complete genometype II secretion system protein8e-0755.1
NC_003551:659236:6690566690566701441089Methanopyrus kandleri AV19, complete genomePredicted membrane protein1e-0653.9
NC_006155:3992818:401085140108514011684834Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-0653.5
NC_002932:440191:455327455327456244918Chlorobium tepidum TLS, complete genomeTadB protein2e-0653.5
NC_017154:734875:743335743335743916582Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-0653.1
NC_015588:95697:108643108643109572930Isoptericola variabilis 225 chromosome, complete genomeType II secretion system F domain protein3e-0652.8
NC_003143:741169:749629749629750462834Yersinia pestis CO92, complete genomehypothetical protein3e-0652.8
NC_004088:3859173:387207038720703872903834Yersinia pestis KIM, complete genomehypothetical protein3e-0652.8
NC_008149:650706:659167659167660000834Yersinia pestis Nepal516, complete genomehypothetical protein3e-0652.8
NC_005810:3333000:334157133415713342404834Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein3e-0652.8
NC_010634:3905369:392231239223123923145834Yersinia pseudotuberculosis PB1/+, complete genometype II secretion system protein3e-0652.8
NC_010159:259695:272592272592273425834Yersinia pestis Angola, complete genometype II secretion system protein3e-0652.8
NC_008150:3430000:344295234429523443785834Yersinia pestis Antiqua, complete genomehypothetical protein3e-0652.8
NC_009381:522731:531190531190532023834Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-0652.8
NC_014029:792719:801173801173802006834Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-0652.8
NC_017160:737000:745514745514746347834Yersinia pestis D182038 chromosome, complete genomehypothetical protein3e-0652.8
NC_017168:341233:354840354840355673834Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-0652.8
NC_017265:3724500:373743037374303738263834Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,Type II/IV secretion system protein TadC,associated with Flp pilus assembly3e-0652.8
NC_021171:4549673:456131845613184562301984Bacillus sp. 1NLA3E, complete genometype II secretion system F domain-containing protein4e-0652.4
NC_009708:692508:701022701022701855834Yersinia pseudotuberculosis IP 31758 chromosome, complete genometype II secretion system protein8e-0651.6