Pre_GI: BLASTP Hits

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Query: NC_011769:3434744:3445161 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 3445161, End: 3446624, Length: 1464

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009615:2503465:2528601252860125300251425Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein7e-125447
NC_015379:89441:1021301021301035361407Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein3e-112405
NC_016616:2997348:3017645301764530191051461Dechlorosoma suillum PS chromosome, complete genomeHis-Xaa-Ser repeat-associated upstream radical SAM protein3e-106386
NC_014623:7550461:7550461755046175519031443Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein5e-99361
NC_009349:3396:1762117621190751455Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeradical SAM domain-containing protein4e-95348
NC_015556:2265940:2316980231698023184791500Pseudomonas fulva 12-X chromosome, complete genomeRadical SAM domain protein5e-95348
NC_016948:2129335:2137171213717121386341464Mycobacterium intracellulare MOTT-64 chromosome, complete genomeradical SAM domain-containing protein3e-88326
NC_014387:2297304:2314241231424123156411401Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeradical SAM domain-containing protein1e-82307
NC_009659:1129066:1138477113847711399191443Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein7e-77288
NC_014500:3175283:3197101319710131984951395Dickeya dadantii 3937 chromosome, complete genomearylsulfatase regulator1e-60234
NC_012917:1840172:1865625186562518670191395Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeRadical SAM domain protein2e-60233
NC_014562:2563466:2578549257854925799431395Pantoea vagans C9-1 chromosome, complete genomeCoenzyme PQQ synthesis protein E5e-60232
NC_011283:4438500:4465399446539944667871389Klebsiella pneumoniae 342 chromosome, complete genomeradical SAM protein2e-59230
NC_009792:3245368:3273338327333832747261389Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-59229
NC_013941:3300000:3318656331865633200441389Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein1e-58227
NC_009436:3117661:3134246313424631356341389Enterobacter sp. 638, complete genomeradical SAM protein2e-58227
NC_018000:4958637:4967459496745949688681410Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein1e-42174
NC_016641:1984206:1990528199052819919491422Paenibacillus terrae HPL-003 chromosome, complete genomearylsulfatase regulator9e-1788.6
NC_013216:956461:9657329657329670931362Desulfotomaculum acetoxidans DSM 771, complete genomeRadical SAM domain protein4e-1686.7
NC_016048:1930089:1943172194317219445511380Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein1e-1481.3
NC_014328:3682000:3689705368970536910721368Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative Fe-S oxidoreductase2e-1377.8
NC_011898:598014:6202596202596216021344Clostridium cellulolyticum H10, complete genomeRadical SAM domain protein2e-1274.3
NC_015474:487517:5033115033115047291419Pyrococcus sp. NA2 chromosome, complete genomearylsulfatase regulatory protein, putative2e-1274.3
NC_014973:3151701:3158140315814031593691230Geobacter sp. M18 chromosome, complete genomeRadical SAM domain-containing protein3e-1273.9
NC_021182:4186515:4200167420016742013001134Clostridium pasteurianum BC1, complete genomeanaerobic sulfatase-maturating enzyme6e-1272.8
NC_009464:3135468:3140697314069731418481152Uncultured methanogenic archaeon RC-I, complete genomearylsulfatase regulator8e-1272
NC_020291:1871846:1872810187281018739971188Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomearylsulfatase regulator2e-1170.9
NC_020291:2040047:2040047204004720414681422Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeCys-rich peptide radical SAM maturase CcpM2e-1170.5
NC_009635:94937:112163112163113035873Methanococcus aeolicus Nankai-3 chromosome, complete genomeradical SAM domain-containing protein3e-1170.5
NC_007492:3384077:3411859341185934132921434Pseudomonas fluorescens PfO-1, complete genomeRadical SAM4e-1170.1
NC_007794:3218729:3240527324052732419811455Novosphingobium aromaticivorans DSM 12444, complete genomeRadical SAM1e-1068.2
NC_010001:3266561:3266561326656132679551395Clostridium phytofermentans ISDg, complete genomeRadical SAM domain protein2e-1067.8
NC_014915:595569:6076406076406090641425Geobacillus sp. Y412MC52 chromosome, complete genomeRadical SAM domain protein3e-1067.4
NC_013411:1454465:1467696146769614691201425Geobacillus sp. Y412MC61, complete genomeRadical SAM domain protein3e-1067.4
NC_013421:801542:8033468033468045691224Pectobacterium wasabiae WPP163, complete genomeRadical SAM domain protein7e-1065.9
NC_015416:2967511:2978289297828929797761488Methanosaeta concilii GP-6 chromosome, complete genomeradical SAM domain-containing protein9e-1065.5
NC_016077:113246:1185971185971200211425Acidaminococcus intestini RyC-MR95 chromosome, complete genomeradical SAM family protein2e-0964.3
NC_017243:554500:5667575667575679891233Brachyspira intermedia PWS/A chromosome, complete genomearylsulfatase activating protein AslB3e-0963.9
NC_018870:354164:3541643541643552281065Thermacetogenium phaeum DSM 12270 chromosome, complete genomeradical SAM domain-containing protein4e-0963.2
NC_013410:1152188:1180302118030211817111410Fibrobacter succinogenes subsp. succinogenes S85 chromosome,radical SAM protein6e-0962.8
NC_015437:1685824:1695224169522416963901167Selenomonas sputigena ATCC 35185 chromosome, complete genomeRadical SAM domain protein9e-0962
NC_019908:2247956:2260274226027422615091236Brachyspira pilosicoli P43/6/78 chromosome, complete genomearylsulfatase activating protein AslB9e-0962
NC_014330:952500:9559639559639571981236Brachyspira pilosicoli 95/1000 chromosome, complete genomearylsulfatase activating protein AslB1e-0862
NC_008701:37219:4525245252464211170Pyrobaculum islandicum DSM 4184, complete genomeRadical SAM domain protein2e-0861.2
NC_016610:932746:9415979415979430541458Tannerella forsythia ATCC 43037 chromosome, complete genomeradical SAM domain-containing protein2e-0860.8
NC_015416:2967511:2996078299607829975861509Methanosaeta concilii GP-6 chromosome, complete genomehypothetical protein2e-0860.8
NC_007759:1419171:1427682142768214291151434Syntrophus aciditrophicus SB, complete genomeradical SAM superfamily protein4e-0860.1
NC_015601:726962:7319987319987333861389Erysipelothrix rhusiopathiae str. Fujisawa, complete genomeradical SAM domain-containing protein5e-0859.7
NC_012917:2786283:2794102279410227953251224Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeRadical SAM domain protein6e-0859.3
NC_008800:1870596:1892594189259418938471254Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein1e-0758.5
NC_018012:1326553:1346066134606613473071242Thiocystis violascens DSM 198 chromosome, complete genomeradical SAM additional 4Fe4S-binding domain-containing protein1e-0758.2
NC_013216:956461:9671559671559686331479Desulfotomaculum acetoxidans DSM 771, complete genomeRadical SAM domain protein2e-0757.4
NC_016610:61661:7769277692793111620Tannerella forsythia ATCC 43037 chromosome, complete genomeradical SAM domain-containing protein3e-0757.4
NC_008563:1620943:1628169162816916293261158Escherichia coli APEC O1, complete genomehypothetical protein3e-0757
NC_011742:1574036:1581262158126215824191158Escherichia coli S88 chromosome, complete genomehypothetical protein3e-0757
NC_004741:1792442:1797701179770117988581158Shigella flexneri 2a str. 2457T, complete genomeputative enzyme3e-0757
NC_008258:1750964:1759284175928417604411158Shigella flexneri 5 str. 8401, complete genomeputative enzyme3e-0757
NC_016822:1781644:1791691179169117928481158Shigella sonnei 53G, complete genomehypothetical protein3e-0757
NC_007946:1632025:1639251163925116404231173Escherichia coli UTI89, complete genomehypothetical protein YdeM3e-0757
NC_012796:3600630:3639300363930036407181419Desulfovibrio magneticus RS-1, complete genomehypothetical protein3e-0757
NC_007613:1533024:1546090154609015472621173Shigella boydii Sb227, complete genomeputative enzyme5e-0756.6
NC_011601:1675000:1682279168227916834361158Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein5e-0756.6
NC_008253:1534840:1542066154206615432231158Escherichia coli 536, complete genomehypothetical protein YdeM4e-0756.6
CU928160:1579375:1586601158660115877581158Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein5e-0756.2
NC_013353:1711656:1722335172233517234921158Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein5e-0756.2
NC_012967:1546000:1553584155358415547411158Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein5e-0756.2
NC_012947:2228235:2246112224611222472691158Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeradical SAM protein5e-0756.2
NC_012759:1462490:1469716146971614708731158Escherichia coli BW2952 chromosome, complete genomehypothetical protein5e-0756.2
NC_011415:1669484:1676710167671016778671158Escherichia coli SE11 chromosome, complete genomehypothetical protein5e-0756.2
NC_011750:1849561:1856788185678818579451158Escherichia coli IAI39 chromosome, complete genomehypothetical protein5e-0756.2
AP010958:1711656:1722335172233517234921158Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein5e-0756.2
NC_010473:1661000:1668252166825216694091158Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein5e-0756.2
NC_009800:1589000:1596456159645615976131158Escherichia coli HS, complete genomeradical SAM domain protein5e-0756.2
NC_010468:2345781:2363076236307623642331158Escherichia coli ATCC 8739, complete genomeRadical SAM domain protein5e-0756.2
NC_011751:1770376:1777602177760217787591158Escherichia coli UMN026 chromosome, complete genomehypothetical protein5e-0756.2
NC_000913:1570431:1577657157765715788141158Escherichia coli K12, complete genomehypothetical protein5e-0756.2
AC_000091:1574000:1581347158134715825041158Escherichia coli W3110 DNA, complete genomehypothetical protein5e-0756.2
CU928145:1684777:1692003169200316931601158Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein5e-0756.2
NC_009801:1678790:1689469168946916906261158Escherichia coli E24377A, complete genomeradical SAM domain protein5e-0756.2
NC_004431:1754627:1765305176530517664771173Escherichia coli CFT073, complete genomeHypothetical protein ydeM5e-0756.2
NC_013364:1902761:1913440191344019145971158Escherichia coli O111:H- str. 11128, complete genomehypothetical protein5e-0756.2
NC_010498:1659328:1671347167134716725041158Escherichia coli SMS-3-5, complete genomeradical SAM domain-containing protein5e-0756.2
NC_013361:2047170:2057849205784920590061158Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein5e-0756.2
NC_013008:2007228:2014454201445420156111158Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein5e-0756.2
NC_011353:2004800:2015478201547820166351158Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeradical SAM domain-containing protein5e-0756.2
NC_002695:2091890:2100877210087721020341158Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein5e-0756.2
NC_013941:1894496:1905175190517519063471173Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein5e-0756.2
NC_002655:1966464:1986423198642319875951173Escherichia coli O157:H7 EDL933, complete genomeputative enzyme5e-0756.2
NC_016902:2395578:2416138241613824172951158Escherichia coli KO11FL chromosome, complete genomeradical SAM protein5e-0756.2
NC_011741:1579375:1586601158660115877581158Escherichia coli IAI1 chromosome, complete genomehypothetical protein5e-0756.2
NC_011748:1684777:1692003169200316931601158Escherichia coli 55989, complete genomehypothetical protein5e-0756.2
CP002185:1681327:1688553168855316897101158Escherichia coli W, complete genomeconserved protein5e-0756.2
CP002516:2395578:2416138241613824172951158Escherichia coli KO11, complete genomeRadical SAM domain protein5e-0756.2
NC_007384:1696831:1708718170871817098901173Shigella sonnei Ss046, complete genomeputative enzyme1e-0655.5
NC_003552:3269000:3277504327750432788441341Methanosarcina acetivorans C2A, complete genomearylsulfatase regulator9e-0755.5
NC_014364:667841:6754996754996766831185Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeRadical SAM domain protein2e-0654.3
NC_015977:3424178:3446194344619434472041011Roseburia hominis A2-183 chromosome, complete genomeradical SAM domain-containing protein2e-0654.3
NC_007643:889755:8969628969628980261065Rhodospirillum rubrum ATCC 11170, complete genomeRadical SAM3e-0653.9
NC_020389:1936000:1943557194355719448761320Methanosarcina mazei Tuc01, complete genomeArylsulfatase regulatory protein3e-0653.5
NC_006449:1714994:1729235172923517305091275Streptococcus thermophilus CNRZ1066, complete genomehypothetical protein5e-0652.8
NC_006448:1709523:1727366172736617286401275Streptococcus thermophilus LMG 18311, complete genomehypothetical protein5e-0652.8