Pre_GI Gene

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Host: NC_011898 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011898:598014 Clostridium cellulolyticum H10, complete genome

Host Lineage: Clostridium cellulolyticum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: A non-ruminal mesophilic cellulolytic bacterium originally isolated from decayed grass compost. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Clostridium cellulolyticum is a mesophilic cellulolytic bacterium. Cellulose-degradation by C. cellulolyticum has been extensively studied. The cellulolytic enzymes of this organism are bound to a protein scaffold in an extracellular multienzyme complex called a cellulosome.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
598014598868855dihydrodipicolinate reductaseQuickGO ontologyBLASTP
5988836001031221peptidase S11 D-alanyl-D-alanine carboxypeptidase 1QuickGO ontologyBLASTP
6003336020691737GerA spore germination proteinQuickGO ontologyBLASTP
6020566031591104Spore germination proteinQuickGO ontologyBLASTP
6031346043331200germination protein GerxC familyQuickGO ontologyBLASTP
605119606759164116S ribosomal RNAQuickGO ontologyBLASTP
60693760701276tRNA-AlaQuickGO ontologyBLASTP
607533610445291323S ribosomal RNAQuickGO ontologyBLASTP
6106976108121165S ribosomal RNAQuickGO ontologyBLASTP
610925611395471amino acid-binding ACT domain proteinQuickGO ontologyBLASTP
611421612185765dihydrodipicolinate reductaseQuickGO ontologyBLASTP
612214613095882dihydrodipicolinate synthaseQuickGO ontologyBLASTP
6135486151881641SpoIIDLytB domain proteinQuickGO ontologyBLASTP
6152486166121365aspartate kinaseQuickGO ontologyBLASTP
6168716178931023S-adenosylmethioninetRNA-ribosyltransferase- isomeraseQuickGO ontologyBLASTP
6179246190451122queuine tRNA-ribosyltransferaseQuickGO ontologyBLASTP
619108619389282preprotein translocase YajC subunitQuickGO ontologyBLASTP
619494619898405hypothetical proteinBLASTP
619980620120141hypothetical proteinBLASTP
6202596216021344Radical SAM domain proteinQuickGO ontologyBLASTP