Pre_GI Gene

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Host: NC_008253 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008253:1534840 Escherichia coli 536, complete genome

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
153484015376232784probable zinc protease PqqLQuickGO ontologyBLASTP
153768015400522373hypothetical protein YddBQuickGO ontologyBLASTP
154009015417751686hypothetical ABC transporter ATP-binding protein YddAQuickGO ontologyBLASTP
154206615432231158hypothetical protein YdeMQuickGO ontologyBLASTP
154327515449571683putative sulfatase YdeN precursorQuickGO ontologyBLASTP
15453591546120762hypothetical transcriptional regulator YdeOQuickGO ontologyBLASTP
15461961546393198hypothetical proteinBLASTP
154664115489202280hypothetical protein YdePQuickGO ontologyBLASTP
15492061549493288putative fimbrial-like proteinQuickGO ontologyBLASTP
15495071550343837putative truncated fimbrial usher proteinQuickGO ontologyBLASTP
15503841551055672hypothetical transcriptional regulator proteinQuickGO ontologyBLASTP
15513491552221873hypothetical protein HipAQuickGO ontologyBLASTP
15522211552505285HTH-type transcriptional regulator HipBQuickGO ontologyBLASTP
15527951553553759trans-aconitate 2-methyltransferaseQuickGO ontologyBLASTP
15535571554471915hypothetical protein YneE putative membrane proteinQuickGO ontologyBLASTP
155466815561191452altronate oxidoreductaseQuickGO ontologyBLASTP