Pre_GI: BLASTP Hits

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Query: NC_011205:1345511:1353608 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 1353608, End: 1354438, Length: 831

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:1734292:175921117592111760041831Salmonella enterica subsp. enterica serovar Gallinarum/pullorumphage recombination protein5e-162570
NC_002655:2142587:216290221629022163711810Escherichia coli O157:H7 EDL933, complete genomerecombinase, DNA renaturation protein encoded by prophage CP-933R2e-146518
NC_010473:1493983:150140415014041502213810Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage; recombination and repair protein1e-145515
CP002516:2580774:260251826025182603327810Escherichia coli KO11, complete genomeRecT protein1e-145515
NC_000913:1404000:141200814120081412817810Escherichia coli K12, complete genomeRac prophage; recombination and repair protein1e-145515
AC_000091:1407693:141569814156981416507810Escherichia coli W3110 DNA, complete genomerecombination and repair protein1e-145515
NC_011415:1472500:147741214774121478221810Escherichia coli SE11 chromosome, complete genomerecombination and repair protein RecT1e-145515
NC_012759:1296000:130406713040671304876810Escherichia coli BW2952 chromosome, complete genomerecombination and repair protein RecT1e-145515
NC_012947:2366000:238242123824212383230810Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completerecombination and repair protein RecT1e-145515
NC_012967:1403733:141115414111541411963810Escherichia coli B str. REL606 chromosome, complete genomerecombination and repair protein RecT1e-145515
NC_016902:2580774:260251826025182603327810Escherichia coli KO11FL chromosome, complete genomeRecT protein1e-145515
CP002185:1493280:150252315025231503332810Escherichia coli W, complete genomeRac prophage; recombination and repair protein1e-145515
NC_007712:1954808:1977354197735419783671014Sodalis glossinidius str. 'morsitans', complete genomephage recombinase6e-81300
NC_012125:1897611:190973319097331910179447Salmonella enterica subsp. enterica serovar Paratyphi C strainRac prophage; recombination and repair protein1e-63243
NC_014915:2963500:299691029969102997755846Geobacillus sp. Y412MC52 chromosome, complete genomeRecT protein9e-63240
NC_013411:597235:606180606180607025846Geobacillus sp. Y412MC61, complete genomeRecT protein9e-63240
NC_016935:1636278:165086616508661651765900Paenibacillus mucilaginosus 3016 chromosome, complete genomeDNA-binding phage-related protein4e-57221
NC_010645:1496816:1498810149881014998411032Bordetella avium 197N, complete genomephage recombination protein2e-56219
NC_016935:6464201:648503064850306485929900Paenibacillus mucilaginosus 3016 chromosome, complete genomeDNA-binding phage-related protein2e-56219
NC_010645:406794:4071934071934082241032Bordetella avium 197N, complete genomephage recombination protein9e-56217
NC_009256:1253384:1255713125571312567651053Burkholderia vietnamiensis G4 chromosome 1, complete sequenceRecT protein8e-54210
NC_009255:1344000:1347310134731013483621053Burkholderia vietnamiensis G4 chromosome 2, complete sequenceRecT protein8e-54210
NC_014831:8965:218752187522801927Thermaerobacter marianensis DSM 12885 chromosome, complete genomeRecT protein3e-52205
NC_006270:1415001:143041114304111431232822Bacillus licheniformis ATCC 14580, complete genomeDNA binding, phage related protein8e-52204
NC_006322:1415863:143127414312741432095822Bacillus licheniformis ATCC 14580, complete genomeYqaK8e-52204
NC_017208:694500:700832700832701638807Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeDNA-binding phage-related protein3e-51202
NC_020134:420500:426773426773427588816Clostridium stercorarium subsp. stercorarium DSM 8532, completeprotein RecT1e-46186
NC_012590:2117027:215253721525372153355819Corynebacterium aurimucosum ATCC 700975, complete genomeputative phage recombinase1e-43176
NC_015437:1494777:151008915100891511000912Selenomonas sputigena ATCC 35185 chromosome, complete genomeRecT protein2e-43176
NC_016077:1278104:128970512897051290493789Acidaminococcus intestini RyC-MR95 chromosome, complete genomerecombination and repair protein recT2e-41169
NC_012658:2525931:253851825385182539402885Clostridium botulinum Ba4 str. 657 chromosome, complete genomeRecT3e-40165
NC_014394:993465:9980239980239990751053Gallionella capsiferriformans ES-2 chromosome, complete genomeRecT protein2e-39162
NC_012491:3736167:375579737557973756741945Brevibacillus brevis NBRC 100599, complete genomehypothetical protein1e-37156
NC_008595:771753:7881987881987893101113Mycobacterium avium 104, complete genomeYqaK protein4e-35148
NC_006905:1961774:198265319826531982994342Salmonella enterica subsp. enterica serovar Choleraesuis strRecT protein1e-32140
NC_003198:1867456:188755218875521887913362Salmonella enterica subsp. enterica serovar Typhi str. CT18,6e-27121
NC_006905:1961774:198253819825381982861324Salmonella enterica subsp. enterica serovar Choleraesuis strRecT protein4e-26118
NC_020207:1170000:117113711711371172027891Enterococcus faecium NRRL B-2354, complete genomeRecombinational DNA repair protein RecT (prophage associated)1e-20100
NC_010999:1245239:125824412582441259107864Lactobacillus casei, complete genomeRecT protein5e-1685.1
NC_004557:1141558:114505311450531145859807Clostridium tetani E88, complete genomehypothetical protein7e-1684.3
NC_002662:447236:453010453010453816807Lactococcus lactis subsp. lactis Il1403, complete genomerecombinase4e-1582
NC_010002:2110953:211638421163842117307924Delftia acidovorans SPH-1, complete genomeRecT protein8e-1580.9
NC_012471:141463:148361148361149281921Streptococcus equi subsp. equi 4047, complete genomephage RecT family protein9e-1580.9
NC_012891:1100726:110955111095511110477927Streptococcus dysgalactiae subsp. equisimilis GGS_124 chromosome 1,recT protein1e-1480.5
NC_010610:755000:7667607667607677881029Lactobacillus fermentum IFO 3956, complete genomehypothetical protein2e-1479.7
NC_009513:870837:875993875993876922930Lactobacillus reuteri F275, complete genomeRecT protein2e-1479.7
NC_010609:880196:885352885352886281930Lactobacillus reuteri JCM 1112, complete genomehypothetical protein2e-1479.7
NC_016809:389561:397892397892398803912Haemophilus influenzae 10810, complete genomehypothetical protein3e-1479.3
NC_003485:1228149:123491012349101235839930Streptococcus pyogenes MGAS8232, complete genomeputative recombinase3e-1479.3
NC_016809:1778000:178426517842651785185921Haemophilus influenzae 10810, complete genomerecombinational DNA repair protein, RecE pathway3e-1479.3
NC_007146:1405459:141681714168171417737921Haemophilus influenzae 86-028NP, complete genomepredicted recombinational DNA repair protein, RecE pathway3e-1479.3
NC_009567:904922:915925915925916845921Haemophilus influenzae PittGG chromosome, complete genomehypothetical protein3e-1479.3
NC_014922:1360000:138059513805951381515921Haemophilus influenzae F3047 chromosome, complete genomerecombinational DNA repair protein3e-1479.3
NC_002927:2338549:234097023409702341956987Bordetella bronchiseptica RB50, complete genomephage-related DNA recombination protein3e-1479
NC_014922:825396:837624837624838574951Haemophilus influenzae F3047 chromosome, complete genomerecombinational DNA repair protein, RecE pathway4e-1478.6
NC_009495:2685646:268643026864302687233804Clostridium botulinum A str. ATCC 3502 chromosome, complete genomerecombinase, phage RecT family5e-1375.1
NC_009699:2733529:273431327343132735116804Clostridium botulinum F str. Langeland chromosome, complete genomerecombinase4e-1375.1
NC_015428:1483768:150039815003981501345948Lactobacillus buchneri NRRL B-30929 chromosome, complete genomeRecT protein7e-1374.7
NC_009332:1269000:130148813014881302477990Streptococcus pyogenes str. Manfredo chromosome, complete genomephage RecT family protein8e-1374.3
NC_003485:579946:585575585575586564990Streptococcus pyogenes MGAS8232, complete genomeputative recombinase8e-1374.3
NC_002737:1207880:121599812159981216987990Streptococcus pyogenes M1 GAS, complete genomeputative recombinase - phage associated8e-1374.3
NC_003212:2413824:243664624366462437461816Listeria innocua Clip11262, complete genomehypothetical protein2e-1273.6
NC_011660:2924397:293166029316602932475816Listeria monocytogenes HCC23 chromosome, complete genomerecombinase, phage RecT family protein2e-1273.6
NC_003212:57061:840858408584900816Listeria innocua Clip11262, complete genomeputative recombinase [Bacteriophage A118]1e-1273.6
NC_008258:269806:282892282892283794903Shigella flexneri 5 str. 8401, complete genomeputative phage-related DNA recombination protein3e-1272.4
NC_017328:303987:314833314833315735903Shigella flexneri 2002017 chromosome, complete genomeputative phage-related DNA recombination protein5e-1271.6
NC_009800:289000:298005298005298907903Escherichia coli HS, complete genomeRecT family protein5e-1271.6
NC_018515:4660808:468925646892564690083828Desulfosporosinus meridiei DSM 13257 chromosome, complete genomerecombinase, phage RecT family1e-1170.9
NC_006087:2439252:245645624564562457241786Leifsonia xyli subsp. xyli str. CTCB07, complete genomephage recombination protein9e-1270.9
NC_013850:1887556:189678918967891897682894Klebsiella variicola At-22 chromosome, complete genomeRecT protein1e-1170.5
NC_013282:1200993:121037312103731211278906Cronobacter turicensis, complete genomehypothetical protein2e-1169.7
NC_013353:2911741:291079429107942911744951Escherichia coli O103:H2 str. 12009, complete genomeDNA recombination protein Bet2e-1169.3
AP010958:2911741:291079429107942911744951Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted DNA recombination protein Bet2e-1169.3
NC_014551:576000:581968581968582807840Bacillus amyloliquefaciens DSM 7, complete genomeDNA recombination protein; skin element3e-1169.3
NC_017506:93494:135718135718136674957Marinobacter adhaerens HP15 chromosome, complete genomeRecT protein1e-1067.4
NC_014554:2159782:217425821742582175157900Lactobacillus plantarum subsp. plantarum ST-III chromosome,recombination protein RecT2e-1066.2
NC_017341:2127815:214754621475462148466921Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,putative phage-related DNA recombination protein4e-0962
NC_002758:2101137:211521621152162116136921Staphylococcus aureus subsp. aureus Mu50, complete genomehypothetical protein4e-0962
NC_010079:2102856:211736821173682118288921Staphylococcus aureus subsp. aureus USA300_TCH1516, completepossible recombination protein RecT4e-0962
NC_017338:2034698:206934620693462070266921Staphylococcus aureus subsp. aureus JKD6159 chromosome, completeputative phage-related DNA recombination protein4e-0962
NC_017351:2074000:210307321030732103993921Staphylococcus aureus subsp. aureus 11819-97 chromosome, completerecombinase, phage RecT family protein4e-0962
NC_017351:643674:651432651432652352921Staphylococcus aureus subsp. aureus 11819-97 chromosome, completerecombinase, phage RecT family protein4e-0962
NC_011837:1969144:198395219839521984845894Clostridium kluyveri NBRC 12016, complete genomehypothetical protein7e-0961.2
NC_009706:2023912:205244920524492053342894Clostridium kluyveri DSM 555 chromosome, complete genomePhage-related rekombinase protein7e-0961.2
NC_009706:1972000:198411619841161985009894Clostridium kluyveri DSM 555 chromosome, complete genomePhage-related rekombinase protein7e-0961.2
NC_020063:2565605:258956325895632590489927Enterobacteriaceae bacterium strain FGI 57, complete genomerecombinase, phage RecT family3e-0858.9
NC_012781:1968827:198714019871401988048909Eubacterium rectale ATCC 33656, complete genomeRecT family protein5e-0858.5
NC_008571:2582674:259642225964222597363942Gramella forsetii KT0803, complete genomeRecT family protein6e-0858.2
NC_021182:2536000:254221125422112543161951Clostridium pasteurianum BC1, complete genomerecombinational DNA repair protein (RecE pathway)9e-0857.4
NC_009513:1184000:119456111945611195550990Lactobacillus reuteri F275, complete genomeRecT protein1e-0757.4
NC_015558:1425271:144215114421511443086936Streptococcus parauberis KCTC 11537 chromosome, complete genomehypothetical protein1e-0757
NC_016052:842762:848325848325849290966Tetragenococcus halophilus NBRC 12172, complete genomeputative RecT protein3e-0755.8
NC_013198:1095591:111129111112911112166876Lactobacillus rhamnosus GG, complete genomeRecT protein4e-0755.5
NC_013199:845000:850121850121850996876Lactobacillus rhamnosus Lc 705, complete genomeprophage protein5e-0755.1
NC_009632:2148767:216018321601832161103921Staphylococcus aureus subsp. aureus JH1 chromosome, completeRecT protein3e-0652.4
NC_009487:2148316:216030921603092161229921Staphylococcus aureus subsp. aureus JH9 chromosome, completeRecT protein3e-0652.4
NC_009632:361229:369954369954370874921Staphylococcus aureus subsp. aureus JH1 chromosome, completeRecT protein3e-0652.4
NC_009487:362475:369884369884370804921Staphylococcus aureus subsp. aureus JH9 chromosome, completeRecT protein3e-0652.4