Pre_GI: BLASTP Hits

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Query: NC_011147:2496808:2503586 Salmonella enterica subsp. enterica serovar Paratyphi A str

Start: 2503586, End: 2504053, Length: 468

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006511:2501500:250805025080502508499450Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein4e-73273
NC_011751:643976:663770663770664249480Escherichia coli UMN026 chromosome, complete genomeEndopeptidase from phage origin1e-68258
NC_011740:2072173:210037421003742100853480Escherichia fergusonii ATCC 35469, complete genomeEndopeptidase from phage origin (Lysis protein Rz)2e-62237
NC_011205:609464:635672635672636142471Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853bacteriophage lysis protein5e-61232
NC_012125:1330066:135341813534181353885468Salmonella enterica subsp. enterica serovar Paratyphi C straingp159e-55212
NC_020063:2565605:257162125716212572103483Enterobacteriaceae bacterium strain FGI 57, complete genomeBacteriophage lysis protein9e-51198
NC_011283:2836000:289710628971062897570465Klebsiella pneumoniae 342 chromosome, complete genomebacteriophage lysis protein2e-46184
NC_017046:2756000:275602427560242756497474Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein1e-40165
NC_010067:2304313:232553223255322326428897Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-38157
NC_011740:2769961:277523827752382775711474Escherichia fergusonii ATCC 35469, complete genomeputative murein endopeptidase; DLP12 prophage3e-32137
NC_011205:1345511:137223813722381372738501Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853bacteriophage lysis protein3e-32137
NC_007384:2933625:293316429331642933628465Shigella sonnei Ss046, complete genomeendopeptidase-like protein9e-32135
NC_011415:1472500:149739714973971497861465Escherichia coli SE11 chromosome, complete genomeputative phage endopeptidase3e-29127
NC_012947:2366000:237736123773612377825465Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelysis protein5e-29126
NC_012947:3015985:301598530159853016446462Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelysis protein3e-28124
CU928145:1773642:178211417821141782578465Escherichia coli 55989 chromosome, complete genomeputative murein endopeptidase; DLP12 prophage5e-28123
NC_011748:1773642:178211417821141782578465Escherichia coli 55989, complete genomeputative murein endopeptidase; DLP12 prophage5e-28123
NC_013361:3112023:311748531174853117946462Escherichia coli O26:H11 str. 11368 chromosome, complete genomeendopeptidase4e-28123
NC_000913:558920:577330577330577791462Escherichia coli K12, complete genomeDLP12 prophage; predicted murein endopeptidase4e-28123
NC_010473:498252:516662516662517123462Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted murein endopeptidase4e-28123
NC_010473:623810:629922629922630383462Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted murein endopeptidase4e-28123
AC_000091:558920:577330577330577791462Escherichia coli W3110 DNA, complete genomepredicted murein endopeptidase4e-28123
NC_012759:461680:480090480090480551462Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative murein endopeptidase4e-28123
NC_013941:699286:716243716243716716474Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeRz endopeptidase from lambdoid prophage DLP123e-28123
NC_011742:1177946:119983111998311200292462Escherichia coli S88 chromosome, complete genomemurein endopeptidase; DLP12 prophage1e-27122
NC_011294:1220526:123638912363891236868480Salmonella enterica subsp. enterica serovar Enteritidis strphage lysozyme1e-27122
NC_016831:1734292:174088017408801741359480Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative phage lysozyme1e-27122
NC_008563:1175035:119629711962971196770474Escherichia coli APEC O1, complete genomeputative Rz endopeptidase from lambdoid prophage1e-27121
NC_007946:1239278:125891012589101259383474Escherichia coli UTI89, complete genomeputative Rz endopeptidase from lambdoid prophage DLP121e-27121
NC_012947:3231893:323564232356423236103462Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelysis protein4e-27120
NC_012967:531000:549576549576550037462Escherichia coli B str. REL606 chromosome, complete genomeputative murein endopeptidase4e-27120
NC_008563:1475500:148489514848951485371477Escherichia coli APEC O1, complete genomehypothetical protein9e-27119
NC_013008:2910567:291361829136182914085468Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeendopeptidase of prophage CP-933U2e-26118
NC_002695:1929215:194614119461411946608468Escherichia coli O157:H7 str. Sakai, complete genomeputative endopeptidase2e-26118
NC_013364:3312379:333608333360833336550468Escherichia coli O111:H- str. 11128, complete genomeputative endopeptidase2e-26117
NC_011353:2957962:295885129588512959318468Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage lysis protein2e-26117
NC_011748:1408280:142983614298361430309474Escherichia coli 55989, complete genomeEndopeptidase (Lysis protein Rz)7e-24109
CU928145:1408280:142983614298361430309474Escherichia coli 55989 chromosome, complete genomeEndopeptidase (Lysis protein Rz)7e-24109
NC_014121:3627588:365891236589123659370459Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completebacteriophage lysis protein3e-22103
NC_011083:374000:393885393885394322438Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,bacteriophage lysis protein1e-21102
NC_006905:368942:392143392143392580438Salmonella enterica subsp. enterica serovar Choleraesuis strRz lysis protein4e-21100
NC_010067:2529750:257967425796742580111438Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-21100
NC_017328:303987:326072326072326509438Shigella flexneri 2002017 chromosome, complete genomeRz protein5e-21100
NC_009436:2776410:281037328103732810834462Enterobacter sp. 638, complete genomebacteriophage lysis protein2e-2098.2
NC_009800:289000:309952309952310389438Escherichia coli HS, complete genomebacteriophage lysis protein2e-2097.8
NC_013364:2898964:290746329074632907900438Escherichia coli O111:H- str. 11128, complete genomeputative endopeptidase3e-2097.4
NC_011748:824367:838985838985839434450Escherichia coli 55989, complete genomebacteriophage lysis protein9e-2095.9
CU928145:824367:838985838985839434450Escherichia coli 55989 chromosome, complete genomebacteriophage lysis protein9e-2095.9
NC_016816:1970189:199332319933231993823501Pantoea ananatis LMG 5342, complete genomeputative phage endopeptidase8e-1992.8
NC_014562:1772842:177839417783941778870477Pantoea vagans C9-1 chromosome, complete genomeputative endopeptidase4e-1787
NC_013892:2005480:200921120092112009678468Xenorhabdus bovienii SS-2004 chromosome, complete genomeendopeptidase (Protein gp15)6e-1579.7
NC_010473:1493983:151076515107651511064300Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage; predicted defective peptidase2e-1477.8
NC_000913:1404000:142136914213691421668300Escherichia coli K12, complete genomeRac prophage; predicted defective peptidase2e-1477.8
AC_000091:1407693:142505914250591425358300Escherichia coli W3110 DNA, complete genomepredicted defective peptidase2e-1477.8
NC_012967:1403733:141822514182251418524300Escherichia coli B str. REL606 chromosome, complete genomeputative defective peptidase2e-1477.8
NC_013892:671000:689248689248689727480Xenorhabdus bovienii SS-2004 chromosome, complete genomeRac prophage; prophage lambda endopeptidase4e-1477
NC_010554:539122:544685544685545146462Proteus mirabilis HI4320, complete genomephage endopeptidase6e-0856.6
NC_009783:1956000:197415019741501974632483Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein4e-0753.5
NC_013282:1804909:182556518255651826029465Cronobacter turicensis, complete genomeEndopeptidase1e-0652