Pre_GI: BLASTP Hits

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Query: NC_010162:3177324:3180929 Sorangium cellulosum 'So ce 56', complete genome

Start: 3180929, End: 3181384, Length: 456

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008782:3252092:325901532590153259920906Acidovorax sp. JS42, complete genometranscriptional regulator, LysR family6e-1786.3
NC_014641:20103:410434104341975933Achromobacter xylosoxidans A8 plasmid pA81, complete sequenceHTH-type transcriptional activator NahR 32e-1581.6
NC_008781:2611702:262742326274232628379957Polaromonas naphthalenivorans CJ2, complete genometranscriptional regulator, LysR family3e-1580.5
NC_008752:166877:1820701820701833681299Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, LysR family4e-1580.1
NC_015138:201323:211862211862212773912Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator9e-1579
NC_006569:370846:381777381777382751975Silicibacter pomeroyi DSS-3 megaplasmid, complete sequencetranscriptional regulator, LysR family2e-1478.2
NC_010172:5036385:504634750463475047306960Methylobacterium extorquens PA1, complete genomeLysR substrate-binding4e-1477
NC_016830:3230939:325379932537993254713915Pseudomonas fluorescens F113 chromosome, complete genomeprotein MexT1e-1375.1
NC_015379:3736500:373842937384293739343915Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family2e-1375.1
NC_012988:5516872:553280755328075533766960Methylobacterium extorquens DM4, complete genomeLysR family transcriptional regulator2e-1374.7
NC_015733:2720183:273520827352082736122915Pseudomonas putida S16 chromosome, complete genomeLysR family transcriptional regulator3e-1373.9
NC_010511:4258000:427139842713984272324927Methylobacterium sp. 4-46 chromosome, complete genomeLysR family transcriptional regulator6e-1373.2
NC_009439:1297851:130384013038401304802963Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator8e-1372.8
NC_007511:3512100:353444735344473535373927Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LysR family6e-1372.8
NC_007511:3512100:352254135225413523473933Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, LysR family8e-1372.4
NC_008061:2368517:239821323982132399139927Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, LysR family1e-1272
NC_010529:296500:311314311314312246933Cupriavidus taiwanensis plasmid pRALTA, complete sequenceNodD transcriptional regulator; lysR family1e-1272
NC_002947:4167500:417027541702754171180906Pseudomonas putida KT2440, complete genometranscriptional regulator, LysR family2e-1271.6
NC_004463:2158116:218239221823922183336945Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein5e-1270.1
NC_010557:679656:712468712468713370903Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetranscriptional regulator, LysR family1e-1168.9
NC_008392:1029134:104404010440401044942903Burkholderia cepacia AMMD chromosome 3, complete sequencetranscriptional regulator, LysR family1e-1168.9
NC_009439:2427120:243460724346072435509903Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator1e-1168.6
NC_014623:1883259:189844618984461899354909Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeLysR family transcriptional regulator1e-1168.6
NC_009656:4079319:408279240827924083724933Pseudomonas aeruginosa PA7 chromosome, complete genomeLysR family transcriptional regulator5e-1166.6
NC_016830:1645879:166486316648631665786924Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator7e-1166.2
NC_015727:1357095:137410813741081374824717Cupriavidus necator N-1 plasmid BB1p, complete sequenceLysR family transcriptional regulator6e-1166.2
NC_010505:5035668:504944150494415050385945Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, LysR family8e-1165.9
NC_011894:4066926:409482740948274095753927Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, LysR family1e-1065.1
NC_018691:4619245:462260946226094623520912Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator, LysR family2e-1064.7
NC_014641:20103:310553105531963909Achromobacter xylosoxidans A8 plasmid pA81, complete sequencebacterial regulatory helix-turn-helix protein, LysR family protein 2032e-1064.3
NC_010524:4402478:442545844254584426423966Leptothrix cholodnii SP-6, complete genometranscriptional regulator, LysR family5e-1063.2
NC_017986:5833819:583514258351425836062921Pseudomonas putida ND6 chromosome, complete genomeNahR7e-1062.8
NC_009512:3068495:307157930715793072511933Pseudomonas putida F1, complete genometranscriptional regulator, LysR family1e-0962
NC_017986:5467279:547918954791895480121933Pseudomonas putida ND6 chromosome, complete genomeLysR family transcriptional regulator1e-0962
NC_016830:2642881:264642726464272647344918Pseudomonas fluorescens F113 chromosome, complete genomeLysR family transcriptional regulator2e-0961.6
NC_015379:4249238:426468542646854265602918Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative Transcription factor, LysR family2e-0961.6
NC_003296:262118:276258276258277172915Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTION REGULATOR PROTEIN4e-0960.5
NC_011894:585637:603301603301603588288Methylobacterium nodulans ORS 2060, complete genome5e-0960.1
NC_004463:2158116:218076621807662181758993Bradyrhizobium japonicum USDA 110, complete genometranscriptional regulatory protein5e-0960.1
NC_014311:3348102:336671533667153367680966Ralstonia solanacearum PSI07 chromosome, complete genomeHTH-type transcriptional regulator syrM 15e-0959.7
NC_010625:1602191:162819216281921629166975Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetranscriptional regulator, LysR family6e-0959.7
NC_020209:1986503:200880320088032009744942Pseudomonas poae RE*1-1-14, complete genomeLysR family transcription regulator protein7e-0959.7
NC_014217:4550544:458732945873294588243915Starkeya novella DSM 506 chromosome, complete genometranscriptional regulator, LysR family9e-0959.3
NC_004129:3452885:348876534887653489682918Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, LysR family9e-0959.3
NC_007645:3756654:375780337578033758747945Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator9e-0959.3
NC_009439:3535152:354860435486043549542939Pseudomonas mendocina ymp, complete genomeLysR family transcriptional regulator1e-0858.9
NC_006371:1411335:144096814409681441873906Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical transcriptional regulator, LysR family1e-0858.9
NC_015381:1705383:170681117068111707734924Burkholderia gladioli BSR3 chromosome 1, complete sequence1e-0858.5
NC_010623:1961685:196825519682551969184930Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, LysR family2e-0858.2
NC_009436:3807420:381830238183023819228927Enterobacter sp. 638, complete genomeLysR family transcriptional regulator2e-0857.8
NC_016810:25803:3336433364343681005Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator (lysR family)3e-0857.4
NC_016856:25803:3336433364343681005Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator3e-0857.4
NC_016857:25803:3336433364343681005Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator3e-0857.4
NC_016863:25804:3336533365343691005Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator3e-0857.4
NC_017046:25758:3336433364343681005Salmonella enterica subsp. enterica serovar Typhimurium str. 798transcriptional regulator (lysR family)3e-0857.4
NC_011205:25805:3336533365343691005Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853transcriptional regulator3e-0857.4
NC_011274:25692:3325233252342561005Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator3e-0857.4
NC_011294:25569:3312133121341251005Salmonella enterica subsp. enterica serovar Enteritidis strtranscriptional regulator3e-0857.4
NC_003197:25803:3336433364343681005Salmonella typhimurium LT2, complete genomeputative transcriptional regulator3e-0857.4
NC_016860:25758:3336433364343681005Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator3e-0857.4
NC_016831:25760:3336533365343691005Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transcriptional regulator (lysR family)3e-0857.4
NC_008786:5128363:513497951349795135926948Verminephrobacter eiseniae EF01-2, complete genometranscriptional regulator, LysR family7e-0856.2
NC_015376:903939:913862913862914785924Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator, LysR family6e-0856.2
NC_007952:3196085:322589732258973226814918Burkholderia xenovorans LB400 chromosome 2, complete sequenceTranscriptional regulator, LysR family8e-0855.8
NC_011080:25751:3335733357343611005Salmonella enterica subsp. enterica serovar Newport str. SL254,putative transcriptional regulator2e-0755.1
NC_003198:25807:333683336834363996Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator (lysR family)1e-0755.1
NC_004631:25807:333683336834363996Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative transcriptional regulator (lysR family)1e-0755.1
NC_006511:25796:333573335734352996Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative transcriptional regulator (lysR family)1e-0755.1
NC_011147:25836:333973339734392996Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator1e-0755.1
NC_016832:25807:333683336834363996Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,LysR-family transcriptional regulator1e-0755.1
NC_010067:2881448:289310228931022894100999Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-0755.1
NC_015727:1357095:137833313783331379250918Cupriavidus necator N-1 plasmid BB1p, complete sequenceLysR family transcriptional regulator2e-0755.1
NC_011149:25760:3336633366343701005Salmonella enterica subsp. enterica serovar Agona str. SL483,putative transcriptional regulator2e-0754.7
NC_017249:7993713:809553280955328096425894Bradyrhizobium japonicum USDA 6, complete genometranscriptional regulator3e-0754.3
NC_011094:25762:3336833368343721005Salmonella enterica subsp. enterica serovar Schwarzengrund strtranscriptional regulator3e-0754.3
NC_010505:2530476:2551319255131925523201002Methylobacterium radiotolerans JCM 2831, complete genometranscriptional regulator, LysR family3e-0754.3
NC_004460:1618892:163372816337281634660933Vibrio vulnificus CMCP6 chromosome II, complete sequenceTranscriptional regulator, LysR family3e-0753.9
NC_005140:340000:359000359000359944945Vibrio vulnificus YJ016 chromosome II, complete sequencetranscriptional regulator3e-0753.9
NC_014966:328056:347027347027347971945Vibrio vulnificus MO6-24/O chromosome II, complete sequencelysR-family transcriptional regulator3e-0753.9
NC_015138:3160764:316968131696813170574894Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator5e-0753.5
NC_015711:3546500:356156035615603562501942Myxococcus fulvus HW-1 chromosome, complete genomeLysR family transcripitonal regulator5e-0753.1
NC_015376:2241000:225434222543422255334993Burkholderia gladioli BSR3 chromosome chromosome 2, completetranscriptional regulator MexT6e-0753.1
NC_008314:2611873:262641726264172627310894Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, LysR-family8e-0752.8
NC_007953:938346:945917945917946852936Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, LysR family8e-0752.8
NC_015138:272500:274941274941275930990Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeLysR family transcriptional regulator1e-0652.4
NC_009512:3251545:327571832757183276020303Pseudomonas putida F1, complete genometranscriptional regulator, LysR family1e-0652
NC_011000:3362382:337903133790313379969939Burkholderia cenocepacia J2315 chromosome 1, complete sequenceLysR family regulatory protein1e-0652
NC_012724:147454:164392164392165333942Burkholderia glumae BGR1 chromosome 1, complete genomeTranscriptional regulator, LysR family protein1e-0652
NC_015957:7348269:739581873958187396717900Streptomyces violaceusniger Tu 4113 chromosome, complete genomeLysR family transcriptional regulator1e-0652
NC_016027:2512297:2523752252375225248161065Gluconacetobacter xylinus NBRC 3288, complete genomeLysR family transcriptional regulator2e-0651.6
NC_010581:2999002:299900229990022999895894Beijerinckia indica subsp. indica ATCC 9039, complete genometranscriptional regulator, LysR family2e-0651.2
NC_014121:2090630:210224621022462103172927Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completebacterial regulatory protein, LysR3e-0650.8
NC_014013:112008:129080129080130036957Sphingobium japonicum UT26S chromosome 2, complete genomeLysR-family transcriptional regulator5e-0650.1
NC_010943:1332243:133936213393621340264903Stenotrophomonas maltophilia K279a, complete genomeputative LysR family transcriptional regulator7e-0649.7
NC_010125:1011430:101697210169721017925954Gluconacetobacter diazotrophicus PAl 5, complete genomeputative transcriptional regulator, LysR family9e-0649.3
NC_015379:2505233:253666425366642536948285Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative transcription factor, LysR family9e-0649.3