Pre_GI: BLASTP Hits

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Query: NC_009664:533021:541592 Kineococcus radiotolerans SRS30216, complete genome

Start: 541592, End: 542620, Length: 1029

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015172:2628128:267525626752562676077822Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeOmpA/MotB domain protein7e-29128
NC_010814:3673983:369606836960683696910843Geobacter lovleyi SZ, complete genomeOmpA/MotB domain protein2e-28126
NC_014393:187454:201434201434202204771Clostridium cellulovorans 743B chromosome, complete genomeOmpA/MotB domain-containing protein4e-27122
NC_009698:2265475:228391022839102284674765Clostridium botulinum A str. Hall chromosome, complete genomechemotaxis protein MotB3e-24112
NC_003030:303812:358748358748359518771Clostridium acetobutylicum ATCC 824, complete genomeChemotaxis motility protein B, gene motB1e-23110
NC_015687:303810:358744358744359514771Clostridium acetobutylicum DSM 1731 chromosome, complete genomechemotaxis motility protein B, motB1e-23110
NC_019978:625476:641883641883642599717Halobacteroides halobius DSM 5150, complete genomeflagellar motor protein1e-23110
NC_010723:3530000:357316535731653573899735Clostridium botulinum E3 str. Alaska E43, complete genomechemotaxis MotB protein3e-23109
NC_013722:1577818:159680715968071597760954Xanthomonas albilineans, complete genomeprobable flagellar motor protein6e-23108
NC_010674:3674739:371578037157803716514735Clostridium botulinum B str. Eklund 17B, complete genomechemotaxis MotB protein1e-22107
UCMB5137:2418403:244106824410682441787720Bacillus atrophaeus UCMB-5137flagellar motor protein MotS4e-22105
NC_016641:872394:878436878436879248813Paenibacillus terrae HPL-003 chromosome, complete genomeompa/motb domain-containing protein4e-22105
NC_008789:350650:388958388958389698741Halorhodospira halophila SL1, complete genomeOmpA/MotB domain protein8e-22104
NC_007298:778723:817714817714818487774Dechloromonas aromatica RCB, complete genomeflagellar motor protein2e-20100
NC_015740:2614317:264011026401102640844735Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeflagellar motor protein MotB2e-20100
NC_015222:1127675:113013411301341130928795Nitrosomonas sp. AL212 chromosome, complete genomeOmpA/MotB domain-containing protein1e-20100
NC_009617:4911595:492938549293854930140756Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeOmpA/MotB domain-containing protein1e-20100
NC_017271:2221370:222338022233802224354975Xanthomonas campestris pv. raphani 756C chromosome, completeMotB protein3e-2099.4
NC_003902:2211790:221179022117902212764975Xanthomonas campestris pv. campestris str. ATCC 33913, completeflagellar motor protein MotD3e-2099.4
NC_007508:2234080:223486422348642235838975Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeflagellar motor protein5e-2099
NC_014483:4740214:474625947462594747074816Paenibacillus polymyxa E681 chromosome, complete genomeFlagellar motor protein8e-2098.2
NC_017195:1411936:141117914111791411964786Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeflagellar stator motB1e-1997.8
NC_016002:3077648:308054630805463081361816Pseudogulbenkiania sp. NH8B, complete genomeOmpA/MotB domain containing protein1e-1997.8
CP002207:2452286:247509924750992475728630Bacillus atrophaeus 1942, complete genomeflagellar motor protein MotS2e-1996.7
NC_014639:2452286:247509924750992475728630Bacillus atrophaeus 1942 chromosome, complete genomeflagellar motor protein MotS2e-1996.7
NC_010505:2103887:210628821062882107148861Methylobacterium radiotolerans JCM 2831, complete genomeOmpA/MotB domain protein5e-1995.5
NC_019897:3810000:382923838292383830077840Thermobacillus composti KWC4 chromosome, complete genomeflagellar motor protein5e-1995.5
NC_013768:721897:724691724691725518828Listeria monocytogenes 08-5923, complete genomehypothetical protein5e-1892.4
NC_013766:757987:757987757987758814828Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein5e-1892.4
NC_002973:730942:734956734956735783828Listeria monocytogenes str. 4b F2365, complete genomechemotaxis protein MotB1e-1790.5
NC_011126:555483:566712566712567527816Hydrogenobaculum sp. Y04AAS1, complete genomeOmpA/MotB domain protein2e-1790.5
NC_009633:2725128:272775027277502728481732Alkaliphilus metalliredigens QYMF chromosome, complete genomeOmpA/MotB domain-containing protein1e-1687.4
NC_007907:321537:339407339407340201795Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-1686.7
NC_009697:2714668:2715908271590827171701263Clostridium botulinum A str. ATCC 19397 chromosome, completechemotaxis motB protein4e-1685.9
NC_007953:1434705:145176914517691452461693Burkholderia xenovorans LB400 chromosome 3, complete sequenceputative flagellar motor protein (MotB)5e-1685.5
NC_016842:775368:791758791758792480723Treponema pallidum subsp. pertenue str. SamoaD chromosome, completeMot family proton (H+) or sodium (Na+) transporter MotB7e-1685.1
NC_016843:775371:791945791945792667723Treponema pallidum subsp. pertenue str. Gauthier chromosome,Mot family proton (H+) or sodium (Na+) transporter MotB7e-1685.1
NC_016844:775334:792112792112792834723Treponema pallidum subsp. pallidum DAL-1 chromosome, completeMot family proton (H+) or sodium (Na+) transporter MotB7e-1685.1
NC_016848:775822:792212792212792934723Treponema pallidum subsp. pertenue str. CDC2 chromosome, completeMot family proton (H+) or sodium (Na+) transporter MotB7e-1685.1
NC_015714:768500:785056785056785778723Treponema paraluiscuniculi Cuniculi A chromosome, complete genomeMot family proton (H+) or sodium (Na+) transporter MotB7e-1685.1
NC_010741:775000:791622791622792338717Treponema pallidum subsp. pallidum SS14, complete genomeflagellar motor rotation protein7e-1685.1
NC_000919:773784:790174790174790890717Treponema pallidum subsp. pallidum str. Nichols, complete genomeflagellar motor protein7e-1685.1
NC_017268:775000:791424791424792140717Treponema pallidum subsp. pallidum str. Chicago chromosome,chemotaxis protein MotB7e-1685.1
NC_021508:775264:791654791654792370717Treponema pallidum subsp. pallidum SS14, complete genomeMot family proton (H+) or sodium (Na+) transporter MotB7e-1685.1
NC_018664:1663324:167366516736651674402738Clostridium acidurici 9a chromosome, complete genomeOmpA/MotB domain-containing protein6e-1685.1
NC_010520:2860960:286486228648622865605744Clostridium botulinum A3 str. Loch Maree, complete genomechemotaxis motB protein9e-1684.7
NC_008710:277207:293652293652294440789Borrelia turicatae 91E135, complete genomechemotaxis MotB protein8e-1684.7
NC_009698:2649453:265335426533542654097744Clostridium botulinum A str. Hall chromosome, complete genomechemotaxis protein MotB1e-1584.3
NC_012491:5628000:563189156318915632673783Brevibacillus brevis NBRC 100599, complete genomeprobable chemotaxis protein1e-1584.3
NC_019903:223843:226620226620227384765Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,flagellar motor protein4e-1582.4
NC_003143:1880000:1894445189444518957281284Yersinia pestis CO92, complete genomeflagellar motor protein6e-1582
NC_010673:291679:294362294362295150789Borrelia hermsii DAH, complete genomechemotaxis MotB protein6e-1582
NC_014029:2607666:2612425261242526137081284Yersinia pestis Z176003 chromosome, complete genomeflagellar motor protein6e-1582
NC_010159:2955562:2960564296056429618291266Yersinia pestis Angola, complete genomechemotaxis MotB protein5e-1582
NC_017265:1715035:1730863173086317321641302Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,chemotaxis MotB protein7e-1581.6
NC_009381:2009842:2014211201421120155121302Yersinia pestis Pestoides F chromosome, complete genomeflagellar motor protein MotB7e-1581.6
NC_005810:1976000:1990709199070919920101302Yersinia pestis biovar Microtus str. 91001, complete genomeflagellar motor protein MotB7e-1581.6
NC_013421:2004088:2016550201655020176021053Pectobacterium wasabiae WPP163, complete genomeOmpA/MotB domain protein1e-1480.5
NC_008593:1103293:112016711201671120892726Clostridium novyi NT, complete genomechemotaxis motB protein2e-1480.5
NC_015566:3269469:326850732685073269472966Serratia sp. AS12 chromosome, complete genomeOmpA/MotB domain-containing protein2e-1480.1
NC_012483:3144689:314724131472413148053813Acidobacterium capsulatum ATCC 51196, complete genomechemotaxis protein MotB2e-1480.1
NC_011728:269853:291012291012291794783Borrelia burgdorferi ZS7, complete genomeflagellar motor protein MotB3e-1479.3
NC_001318:270488:291644291644292426783Borrelia burgdorferi B31, complete genomeflagellar motor protein3e-1479.3
NC_015921:272517:290193290193290921729Borrelia bissettii DN127 chromosome, complete genomeompA family protein5e-1479
NC_012880:1765920:1793667179366717948001134Dickeya dadantii Ech703, complete genomeOmpA/MotB domain protein5e-1479
NC_008277:272741:290514290514291296783Borrelia afzelii PKo, complete genomeflagellar motor rotation protein B4e-1479
NC_017238:272980:290753290753291535783Borrelia afzelii PKo chromosome, complete genomeompA family protein4e-1479
NC_013592:1668092:1697583169758316987131131Dickeya dadantii Ech586, complete genomeOmpA/MotB domain protein4e-1479
NC_006156:271410:290412290412291194783Borrelia garinii PBi chromosome linear, complete sequenceflagellar motor protein4e-1479
NC_004547:1873390:1936321193632119373761056Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeflagellar motor protein9e-1478.2
NC_018604:2303239:230991623099162310716801Brachyspira pilosicoli WesB complete genomeflagellar motor protein MotB1e-1377.8
NC_014330:841841:850582850582851382801Brachyspira pilosicoli 95/1000 chromosome, complete genomeflagellar motor protein MotB1e-1377.8
NC_018607:2184832:219150921915092192309801Brachyspira pilosicoli B2904 chromosome, complete genomeflagellar motor protein MotB1e-1377.8
NC_012917:2971702:2978970297897029800221053Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeOmpA/MotB domain protein1e-1377.4
NC_010002:661696:6663256663256673621038Delftia acidovorans SPH-1, complete genomeOmpA/MotB domain protein1e-1377.4
NC_015563:606783:6114126114126124491038Delftia sp. Cs1-4 chromosome, complete genomeOmpA/MotB domain-containing protein1e-1377.4
NC_014500:3071764:3087090308709030882201131Dickeya dadantii 3937 chromosome, complete genomeflagellar motor rotation protein motB2e-1377
NC_013223:685628:703470703470704216747Desulfohalobium retbaense DSM 5692, complete genomeOmpA/MotB domain protein4e-1375.9
NC_010723:833870:848163848163848906744Clostridium botulinum E3 str. Alaska E43, complete genomechemotaxis protein MotB2e-1273.9
NC_010674:858397:869855869855870598744Clostridium botulinum B str. Eklund 17B, complete genomechemotaxis protein MotB3e-1273.2
NC_011979:3409610:3410787341078734118361050Geobacter sp. FRC-32, complete genomeOmpA/MotB domain protein3e-1273.2
NC_015391:2059191:207910020791002079717618Carnobacterium sp. 17-4 chromosome, complete genomeuncharacterized protein YtxE4e-1272.8
NC_014910:4026613:403999640399964040934939Alicycliphilus denitrificans BC chromosome, complete genomeompa/motb domain protein4e-1272.4
NC_015422:4395388:440826444082644409199936Alicycliphilus denitrificans K601 chromosome, complete genomeOmpA/MotB domain-containing protein4e-1272.4
NC_016803:465453:466227466227466991765Desulfovibrio desulfuricans ND132 chromosome, complete genomeOmpA/MotB domain-containing protein7e-1271.6
NC_020911:2921925:2971930297193029731801251Octadecabacter antarcticus 307, complete genomeMotB-like flagellar motor protein7e-1271.6
NC_007298:778723:791372791372792322951Dechloromonas aromatica RCB, complete genomeflagellar motor protein7e-1271.6
NC_015138:4905935:492300049230004923938939Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeOmpA/MotB domain-containing protein8e-1271.6
NC_014355:220002:2330742330742345791506Candidatus Nitrospira defluvii, complete genomeputative OmpA/MotB family outer membrane protein2e-1170.5
NC_020409:437781:452272452272453036765Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeOmpA/MotB domain protein2e-1170.5
NC_016745:1257397:127498812749881275890903Oceanimonas sp. GK1 chromosome, complete genomeflagellar motor protein MotB2e-1170.1
NC_008543:582129:587351587351588022672Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceOmpA/MotB domain protein8e-1168.2
NC_011001:854713:859935859935860606672Burkholderia cenocepacia J2315 chromosome 2, complete sequenceOmpA family protein8e-1168.2
NC_012881:3727150:374548437454843746230747Desulfovibrio salexigens DSM 2638, complete genomeOmpA/MotB domain protein1e-1067.4
NC_013851:3321853:332621633262163327133918Allochromatium vinosum DSM 180 chromosome, complete genomeOmpA/MotB domain protein1e-1067.4
NC_007519:3527207:354461935446193545347729Desulfovibrio alaskensis G20 chromosome, complete genomechemotaxis protein MotB2e-1066.6
NC_006677:215466:2544192544192554201002Gluconobacter oxydans 621H, complete genomeflagellar motor protein5e-1065.5
NC_009952:3522370:355340435534043554222819Dinoroseobacter shibae DFL 12, complete genomechemotaxis protein MotB1e-0964.3
NC_008313:691692:7089587089587102351278Ralstonia eutropha H16 chromosome 1, complete sequenceouter membrane protein1e-0963.9
NC_019907:920797:9394979394979405041008Liberibacter crescens BT-1 chromosome, complete genomeFlagellar motor rotation protein MotB3e-0963.2
NC_012997:4491871:450815545081554509069915Teredinibacter turnerae T7901, complete genomeOmpA/MotB domain protein4e-0962.8
NC_020126:3426439:3428991342899134307541764Myxococcus stipitatus DSM 14675, complete genomeOmpA family protein3e-0962.8
NC_013722:2784000:278727927872792787929651Xanthomonas albilineans, complete genomehypothetical outer membrane protein6e-0962
NC_011027:858565:871203871203871901699Chlorobaculum parvum NCIB 8327, complete genomeOmpA/MotB domain protein6e-0962
NC_019960:1362370:138050013805001381357858Prevotella dentalis DSM 3688 chromosome 1, complete sequenceflagellar motor protein9e-0961.6
NC_013730:6933754:696795969679596968843885Spirosoma linguale DSM 74, complete genomeOmpA/MotB domain protein1e-0860.8
NC_004344:26828:398923989240872981Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,flagellar motor protein2e-0860.5
NC_014355:220002:2348272348272360291203Candidatus Nitrospira defluvii, complete genomeputative OmpA/MotB family outer membrane protein2e-0860.5
NC_012214:1117325:111643011164301117338909Erwinia pyrifoliae Ep1/96, complete genomeOuter membrane protein, OmpA/MotB2e-0860.5
NC_009348:381752:393056393056394003948Aeromonas salmonicida subsp. salmonicida A449, complete genomeLafU2e-0860.5
NC_019940:1963000:196687619668761967727852Thioflavicoccus mobilis 8321 chromosome, complete genomeflagellar motor protein3e-0860.1
NC_016803:465453:466996466996467748753Desulfovibrio desulfuricans ND132 chromosome, complete genomeOmpA/MotB domain-containing protein3e-0859.7
NC_020126:2216926:2216926221692622225475622Myxococcus stipitatus DSM 14675, complete genomekelch domain-containing protein5e-0858.9
NC_011901:1398376:142085614208561421728873Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completechemotaxis MotB protein9e-0858.2
NC_012997:2367400:2367400236740023770869687Teredinibacter turnerae T7901, complete genomeconserved repeat domain protein2e-0757
NC_020409:437781:453048453048453797750Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeOmpA/MotB domain protein2e-0756.6
NC_004605:1092476:1098604109860410999051302Vibrio parahaemolyticus RIMD 2210633 chromosome II, completehypothetical protein3e-0756.2
NC_015510:4113505:411350541135054114380876Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomeOmpA/MotB domain-containing protein4e-0755.8
NC_007974:1607500:162478616247861625439654Ralstonia metallidurans CH34 chromosome 2, complete sequenceOmpA/MotB5e-0755.5
NC_017059:31564:600236002360712690Rhodospirillum photometricum DSM 122, complete genomeOmpA/MotB protein1e-0654.7
NC_015711:7601733:760436676043667604833468Myxococcus fulvus HW-1 chromosome, complete genomepeptidoglycan-associated lipoprotein (Pal) family protein1e-0654.3
NC_017030:7557295:7572578757257875744641887Corallococcus coralloides DSM 2259 chromosome, complete genomeOmpA domain-containing protein1e-0654.3
NC_007946:258747:282038282038282826789Escherichia coli UTI89, complete genomeputative motility protein MbhA1e-0654.3
NC_008563:258725:282020282020282805786Escherichia coli APEC O1, complete genomeputative motility protein MbhA1e-0654.3
NC_011742:258746:281935281935282825891Escherichia coli S88 chromosome, complete genomehypothetical protein2e-0653.9
NC_015703:234960:2487722487722507782007Runella slithyformis DSM 19594 chromosome, complete genomeOmpA/MotB domain-containing protein2e-0653.9
NC_008391:271254:2861002861002873981299Burkholderia cepacia AMMD chromosome 2, complete sequenceOmpA/MotB domain protein2e-0653.5
NC_008314:1275617:1290293129029312916001308Ralstonia eutropha H16 chromosome 2, complete sequenceouter membrane protein, OmpA/MotB-family2e-0653.5
NC_015222:1607757:162435516243551625188834Nitrosomonas sp. AL212 chromosome, complete genomeOmpA/MotB domain-containing protein3e-0653.1
NC_012225:212727:2300782300782312891212Brachyspira hyodysenteriae WA1, complete genomeouter membrane protein OmpA family3e-0652.8
NC_008253:257059:281381281381282151771Escherichia coli 536, complete genomeputative chemotaxis membrane protein4e-0652.8
NC_011769:247202:2472022472022482391038Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeOmpA/MotB domain protein4e-0652.8
NC_009654:2958316:298410329841032985008906Marinomonas sp. MWYL1, complete genomeOmpA/MotB domain-containing protein4e-0652.4
NC_010086:871723:8897988897988910931296Burkholderia multivorans ATCC 17616 chromosome 2, completetype VI secretion system OmpA/MotB family protein5e-0652.4
NC_010805:1576735:1584211158421115855091299Burkholderia multivorans ATCC 17616 chromosome 2, completeOmpA/MotB domain protein5e-0652.4
NC_016112:2903767:291230229123022913093792Methylomicrobium alcaliphilum chromosome, complete genomeOmpA/MotB domain-containing protein6e-0652