Pre_GI Gene

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Host: NC_011769 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011769:247202 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
2472022482391038OmpAMotB domain proteinQuickGO ontologyBLASTP
2483952498161422FAD-dependent pyridine nucleotide-disulphide oxidoreductaseQuickGO ontologyBLASTP
2498062512511446Glycine dehydrogenase decarboxylatingQuickGO ontologyBLASTP
2512482525791332Glycine dehydrogenase decarboxylatingQuickGO ontologyBLASTP
252596252979384glycine cleavage system H proteinQuickGO ontologyBLASTP
253295253708414response regulator receiver proteinQuickGO ontologyBLASTP
2539512556001650phosphoglucomutase alpha-D-glucose phosphate-specificQuickGO ontologyBLASTP
255816256010195hypothetical proteinBLASTP
2560562572551200DNA methylase N-4N-6 domain proteinQuickGO ontologyBLASTP
2572412584341194McrBC 5-methylcytosine restriction system component-like proteinQuickGO ontologyBLASTP
2584272599591533ATPase associated with various cellular activities AAA_5QuickGO ontologyBLASTP
2608282619281101GTP-binding protein YchFQuickGO ontologyBLASTP
262238262888651Lysine exporter protein LYSEYGGAQuickGO ontologyBLASTP
2631082659212814peptidase M16 domain proteinQuickGO ontologyBLASTP
2663472683562010putative CheA signal transduction histidine kinaseQuickGO ontology
268699268971273hypothetical protein
2691932718862694Beta tubulin autoregulation binding siteQuickGO ontologyBLASTP
272132272500369hypothetical proteinBLASTP
2725882738051218major facilitator superfamily MFS_1QuickGO ontologyBLASTP