Pre_GI: BLASTP Hits

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Query: NC_009656:2422083:2428399 Pseudomonas aeruginosa PA7 chromosome, complete genome

Start: 2428399, End: 2428770, Length: 372

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012880:1127997:114273211427321142917186Dickeya dadantii Ech703, complete genomecarbon storage regulator, CsrA2e-1581.6
NC_013592:3618248:362182636218263622011186Dickeya dadantii Ech586, complete genomecarbon storage regulator, CsrA2e-1581.6
NC_020541:2769419:279027827902782790481204Rhodanobacter sp. 2APBS1, complete genomecarbon storage regulator CsrA3e-1580.5
NC_010718:2337209:237080523708052371041237Natranaerobius thermophilus JW/NM-WN-LF, complete genomecarbon storage regulator, CsrA2e-1477.4
NC_014109:27500:470944709447273180Candidatus Riesia pediculicola USDA chromosome, complete genomecarbon storage regulator7e-1475.9
NC_012793:3035978:304111530411153041363249Geobacillus sp. WCH70, complete genomecarbon storage regulator, CsrA2e-1270.9
NC_014915:3259440:328064932806493280888240Geobacillus sp. Y412MC52 chromosome, complete genomecarbon storage regulator, CsrA2e-1270.9
NC_005773:4028500:404662040466204046808189Pseudomonas syringae pv. phaseolicola 1448A, complete genomecarbon storage regulator3e-1270.5
NC_004129:5204500:521390452139045214092189Pseudomonas fluorescens Pf-5, complete genomecarbon storage regulator3e-1270.5
NC_006510:3133965:315488231548823155130249Geobacillus kaustophilus HTA426, complete genomecarbon storage regulator6e-1269.3
NC_018080:2288700:231320523132052313384180Pseudomonas aeruginosa DK2 chromosome, complete genomecarbon storage regulator6e-1269.3
NC_013093:2599591:261551726155172615777261Actinosynnema mirum DSM 43827, complete genomecarbon storage regulator, CsrA7e-1269.3
NC_015460:1687684:170857717085771708765189Gallibacterium anatis UMN179 chromosome, complete genomecarbon storage regulator8e-1268.9
NC_014829:3877701:388161838816183881845228Bacillus cellulosilyticus DSM 2522 chromosome, complete genomecarbon storage regulator, CsrA2e-1168.2
NC_019978:2260395:227347822734782273708231Halobacteroides halobius DSM 5150, complete genomecarbon storage regulator CsrA3e-1167
NC_007517:480303:485123485123485359237Geobacter metallireducens GS-15, complete genomecarbon storage regulator, CsrA1e-1065.5
NC_008011:924392:933304933304933993690Lawsonia intracellularis PHE/MN1-00, complete genomehypothetical protein3e-1063.9
NC_013791:1082951:109933410993341099564231Bacillus pseudofirmus OF4 chromosome, complete genomecarbon storage regulator3e-1063.5
NC_011567:2556915:255691525569152557163249Anoxybacillus flavithermus WK1, complete genomeRNA-binding global regulator CsrA4e-1063.5
NC_020134:2772500:277704127770412777307267Clostridium stercorarium subsp. stercorarium DSM 8532, completecarbon storage regulator4e-1063.2
NC_009454:2201987:220504022050402205321282Pelotomaculum thermopropionicum SI, complete genomecarbon storage regulator5e-1063.2
NC_014098:3030274:304985130498513050114264Bacillus tusciae DSM 2912 chromosome, complete genomecarbon storage regulator, CsrA6e-1062.8
NC_007759:1356439:137836113783611378600240Syntrophus aciditrophicus SB, complete genomecarbon storage regulator8e-1062.4
NC_016641:945284:952253952253952486234Paenibacillus terrae HPL-003 chromosome, complete genomecarbon storage regulator8e-1062.4
NC_019896:577594:588729588729588953225Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeCarbon storage regulator - like protein1e-0961.6
NC_021150:3505234:351785035178503517999150Azotobacter vinelandii CA6, complete genomecarbon storage regulator, CsrA2e-0961.2
NC_012560:3505235:351785135178513518000150Azotobacter vinelandii DJ, complete genomecarbon storage regulator, CsrA2e-0961.2
NC_015565:1920329:192570519257051925938234Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completecarbon storage regulator CsrA2e-0960.8
NC_010337:748467:769908769908770171264Heliobacterium modesticaldum Ice1, complete genomecarbon storage regulator3e-0960.5
NC_017195:3426000:343496534349653435189225Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completecarbon storage regulator4e-0960.1
NC_004193:2553630:256156125615612561785225Oceanobacillus iheyensis HTE831, complete genomecarbon storage regulator6e-0959.7
NC_009012:2661795:266773026677302667957228Clostridium thermocellum ATCC 27405, complete genomecarbon storage regulator, CsrA7e-0959.3
NC_011899:1807365:182759218275921827837246Halothermothrix orenii H 168, complete genomecarbon storage regulator, CsrA2e-0857.8
NC_012914:6583000:660219766021976602436240Paenibacillus sp. JDR-2, complete genomecarbon storage regulator, CsrA2e-0857.8
NC_009656:2422083:242880524288052429017213Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-0857.8
NC_014387:605711:619047619047619265219Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeglobal regulator family protein2e-0857.4
NC_014650:376070:378051378051378278228Geobacillus sp. Y4.1MC1 chromosome, complete genomecarbon storage regulator CsrA2e-0857.4
NC_009253:2615777:263490226349022635144243Desulfotomaculum reducens MI-1 chromosome, complete genomecarbon storage regulator CsrA3e-0857.4
NC_009633:760872:777447777447777674228Alkaliphilus metalliredigens QYMF chromosome, complete genomecarbon storage regulator3e-0857.4
NC_020291:4944835:498819749881974988415219Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomecarbon storage regulator CsrA5e-0856.6
NC_015660:391627:393625393625393864240Geobacillus thermoglucosidasius C56-YS93 chromosome, completecarbon storage regulator CsrA7e-0855.8
NC_015589:1240197:126215912621591262404246Desulfotomaculum ruminis DSM 2154 chromosome, complete genomecarbon storage regulator8e-0855.8
NC_009617:4946000:495035949503594950577219Clostridium beijerinckii NCIMB 8052 chromosome, complete genomecarbon storage regulator CsrA1e-0755.5
NC_013861:3341955:335664433566443356904261Legionella longbeachae NSW150, complete genomeglobal regulator2e-0754.7
NC_013223:724394:725335725335725595261Desulfohalobium retbaense DSM 5692, complete genomecarbon storage regulator, CsrA2e-0754.7
NC_018664:239000:253889253889254218330Clostridium acidurici 9a chromosome, complete genomecarbon storage regulator2e-0754.7
NC_014378:261064:262089262089262334246Acetohalobium arabaticum DSM 5501 chromosome, complete genomecarbon storage regulator, CsrA2e-0754.3
NC_004578:4432983:445413944541394454333195Pseudomonas syringae pv. tomato str. DC3000, complete genomecarbon storage regulator, putative2e-0754.3
NC_011653:466007:476799476799477020222Thermosipho africanus TCF52B, complete genomecarbon storage regulator3e-0753.9
NC_012563:3090954:310261431026143102832219Clostridium botulinum A2 str. Kyoto, complete genomecarbon storage regulator4e-0753.5
NC_009495:2876865:288852528885252888743219Clostridium botulinum A str. ATCC 3502 chromosome, complete genomecarbon storage regulator4e-0753.5
NC_009697:2790277:280193728019372802155219Clostridium botulinum A str. ATCC 19397 chromosome, completecarbon storage regulator4e-0753.5
NC_009698:2727203:273886327388632739081219Clostridium botulinum A str. Hall chromosome, complete genomecarbon storage regulator4e-0753.5
NC_010516:2900057:290760929076092907827219Clostridium botulinum B1 str. Okra, complete genomecarbon storage regulator5e-0753.1
NC_010723:801215:807025807025807240216Clostridium botulinum E3 str. Alaska E43, complete genomecarbon storage regulator6e-0752.8
NC_010674:828191:829847829847830062216Clostridium botulinum B str. Eklund 17B, complete genomecarbon storage regulator1e-0652.4
NC_009699:2901497:291214829121482912366219Clostridium botulinum F str. Langeland chromosome, complete genomecarbon storage regulator8e-0752.4
NC_012658:2930244:294012129401212940339219Clostridium botulinum Ba4 str. 657 chromosome, complete genomecarbon storage regulator8e-0752.4
NC_017297:2905138:291228629122862912504219Clostridium botulinum F str. 230613 chromosome, complete genomecarbon storage regulator8e-0752.4
NC_019897:128610:178515178515178757243Thermobacillus composti KWC4 chromosome, complete genomecarbon storage regulator CsrA2e-0651.2
NC_014328:1046958:106469010646901064905216Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative carbon storage regulator2e-0651.2
NC_013522:698114:704672704672704938267Thermanaerovibrio acidaminovorans DSM 6589, complete genomecarbon storage regulator, CsrA5e-0650.1
NC_010501:4379920:438935243893524389765414Pseudomonas putida W619, complete genomecarbon storage regulator, CsrA7e-0649.3