Pre_GI: BLASTP Hits

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Query: NC_009439:3104000:3108945 Pseudomonas mendocina ymp, complete genome

Start: 3108945, End: 3109325, Length: 381

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009434:2006500:201584820158482016234387Pseudomonas stutzeri A1501, complete genomeflagellar protein FliS4e-36149
NC_015740:1845370:185346618534661853852387Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeflagellar protein FliS2e-35147
NC_015733:4253961:426173842617384262133396Pseudomonas putida S16 chromosome, complete genomeflagellar protein FliS1e-34144
NC_008340:774206:786827786827787264438Alkalilimnicola ehrlichei MLHE-1, complete genomeflagellar protein FliS1e-30131
NC_013851:2211120:223816322381632238564402Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar protein FliS7e-30129
NC_009092:1504363:156976115697611570171411Shewanella loihica PV-4, complete genomeflagellar protein FliS8e-29125
NC_008740:2905990:290843929084392908843405Marinobacter aquaeolei VT8, complete genomeflagellar protein FliS1e-28124
NC_016112:806256:827372827372827794423Methylomicrobium alcaliphilum chromosome, complete genomeB-type flagellar protein fliS1e-24111
NC_016616:1861852:187072918707291871172444Dechlorosoma suillum PS chromosome, complete genomeflagellar biosynthetic protein FliS1e-23108
NC_016745:2913712:292711429271142927500387Oceanimonas sp. GK1 chromosome, complete genomeflagellar protein FliS2e-22103
NC_008570:1852286:186332818633281863750423Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeflagellar protein FliS7e-2199
NC_011740:1189455:120898712089871209397411Escherichia fergusonii ATCC 35469, complete genomeflagellar protein potentiates polymerization1e-2098.6
NC_015276:3669263:368070836807083681130423Marinomonas mediterranea MMB-1 chromosome, complete genomeflagellar protein FliS2e-2097.8
NC_009348:2836969:284363828436382844060423Aeromonas salmonicida subsp. salmonicida A449, complete genomeflagellar protein FliS2e-2097.8
NC_007508:2277640:230054923005492300962414Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeflagellin-specific chaperone FliS2e-2097.8
NC_015424:1603000:161534816153481615770423Aeromonas veronii B565 chromosome, complete genomeflagellar protein FliS5e-2096.3
NC_012880:1765920:182034418203441820751408Dickeya dadantii Ech703, complete genomeflagellar protein FliS2e-1994
NC_009439:3104000:310939831093983109790393Pseudomonas mendocina ymp, complete genomeflagellar protein FliS3e-1994
NC_015138:4905935:490862349086234909069447Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeflagellar protein FliS2e-1891.3
NC_016816:1912366:192923819292381929648411Pantoea ananatis LMG 5342, complete genomeflagellar biosynthesis protein FliS2e-1890.9
NC_009348:381752:389001389001389393393Aeromonas salmonicida subsp. salmonicida A449, complete genomeLafC3e-1890.5
NC_015968:2845751:285157928515792851989411Enterobacter asburiae LF7a chromosome, complete genomeflagellar protein FliS6e-1889.4
NC_009778:1222273:124699412469941247404411Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein8e-1889
NC_020260:1293860:132360613236061324016411Cronobacter sakazakii Sp291, complete genomeflagellar protein FliS8e-1889
NC_014910:4026613:402661340266134027053441Alicycliphilus denitrificans BC chromosome, complete genomeflagellar protein flis8e-1889
NC_015731:990000:100017010001701000598429Nitrosomonas sp. Is79A3 chromosome, complete genomeflagellar protein FliS2e-1787.8
NC_015563:606783:624564624564624977414Delftia sp. Cs1-4 chromosome, complete genomeflagellar protein FliS2e-1787.4
NC_014500:3023762:305026930502693050679411Dickeya dadantii 3937 chromosome, complete genomeflagellar biosynthesis protein fliS3e-1787
NC_010002:661696:685521685521685934414Delftia acidovorans SPH-1, complete genomeflagellar protein FliS4e-1786.7
NC_013592:1730505:173527017352701735686417Dickeya dadantii Ech586, complete genomeflagellar protein FliS6e-1785.9
NC_014562:1844268:184569818456981846105408Pantoea vagans C9-1 chromosome, complete genomeFlagellar protein fliS7e-1785.9
NC_014121:1357339:137321813732181373628411Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completelagellar protein FliS9e-1785.5
NC_016514:2950860:297299529729952973399405Enterobacter cloacae EcWSU1 chromosome, complete genomeflagellar protein fliS2e-1684
NC_012912:1788308:179429917942991794709411Dickeya zeae Ech1591, complete genomeflagellar protein FliS3e-1684
NC_004547:1970686:197361519736151974025411Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeflagellar protein FliS6e-1682.8
NC_012917:2921932:294232229423222942732411Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeflagellar protein FliS7e-1682.4
NC_009138:1843998:188962818896281890113486Herminiimonas arsenicoxydans, complete genomeflagellar biosynthesis; repressor of class 3a and 3b operons (RflA activity) (partial match)9e-1682
NC_008800:2695977:272166927216692722067399Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,flagellar protein FliS2e-1580.9
NC_015224:2017781:203170020317002032041342Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,flagellar protein FliS2e-1477.4
NC_020304:3447847:344875534487553449222468Desulfocapsa sulfexigens DSM 10523, complete genomeflagellar biosynthetic protein FliS2e-1374.7
NC_007517:480303:489861489861490283423Geobacter metallireducens GS-15, complete genomeFlagellar protein FliS4e-1373.6
NC_014837:2586870:259366225936622594069408Pantoea sp. At-9b chromosome, complete genomeflagellar protein FliS7e-1372.4
NC_005085:4157257:417726841772684177705438Chromobacterium violaceum ATCC 12472, complete genomeprobable flagellar protein FliS4e-1270.1
NC_014378:261064:272439272439272894456Acetohalobium arabaticum DSM 5501 chromosome, complete genomeHpt protein5e-1269.7
NC_010718:2337209:236678623667862367208423Natranaerobius thermophilus JW/NM-WN-LF, complete genomeflagellar protein FliS7e-1269.3
NC_019978:2260395:226732122673212267740420Halobacteroides halobius DSM 5150, complete genomeflagellar biosynthetic protein FliS4e-1063.2
NC_015850:1497998:151710915171091517486378Acidithiobacillus caldus SM-1 chromosome, complete genomeflagellar biosynthesis protein fliS7e-1062.8
NC_020134:2772500:277250227725022772906405Clostridium stercorarium subsp. stercorarium DSM 8532, completeflagellar protein FliS7e-1062.8
NC_014377:1546124:155822115582211558607387Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar protein FliS1e-0962
NC_011899:1807365:182155618215561821978423Halothermothrix orenii H 168, complete genomeflagellar protein FliS1e-0962
NC_006510:3133965:313471731347173135118402Geobacillus kaustophilus HTA426, complete genomeflagellar protein FliS1e-0961.6
NC_007759:1356439:137996713799671380491525Syntrophus aciditrophicus SB, complete genomeflagellin-specific chaperone2e-0961.6
NC_007575:192095:208925208925209323399Sulfurimonas denitrificans DSM 1251, complete genomeflagellar protein FliS2e-0961.2
NC_012781:3087467:309249130924913092886396Eubacterium rectale ATCC 33656, complete genomeflagellar protein5e-0959.7
NC_010520:2937981:294681229468122947201390Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar protein FliS7e-0959.3
NC_007644:779376:804107804107804523417Moorella thermoacetica ATCC 39073, complete genomeflagellar protein FliS7e-0959.3
NC_017297:2905138:291113229111322911521390Clostridium botulinum F str. 230613 chromosome, complete genomeflagellar protein FliS9e-0958.9
NC_009699:2901497:291099429109942911383390Clostridium botulinum F str. Langeland chromosome, complete genomeflagellar protein FliS9e-0958.9
NC_015391:2059191:209097420909742091342369Carnobacterium sp. 17-4 chromosome, complete genomeflagellar protein FliS1e-0858.5
NC_020210:3169258:316925831692583169659402Geobacillus sp. GHH01, complete genomechaperone for the export of flagellin2e-0857.8
NC_012563:3090954:310146231014623101851390Clostridium botulinum A2 str. Kyoto, complete genomeflagellar protein FliS2e-0857.8
NC_009697:2790277:280078528007852801174390Clostridium botulinum A str. ATCC 19397 chromosome, completeflagellar protein FliS2e-0857.8
NC_009698:2727203:273771127377112738100390Clostridium botulinum A str. Hall chromosome, complete genomeflagellar protein FliS2e-0857.8
NC_009495:2876865:288737328873732887771399Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeflagellar protein FliS2e-0857.8
NC_012658:2930244:293897829389782939358381Clostridium botulinum Ba4 str. 657 chromosome, complete genomeflagellar protein FliS2e-0857.8
NC_007503:861668:874400874400874777378Carboxydothermus hydrogenoformans Z-2901, complete genomeflagellar protein FliS3e-0857.4
NC_004557:1826977:183234218323421832728387Clostridium tetani E88, complete genomeflagellar protein fliS5e-0856.6
NC_015660:391627:412871412871413269399Geobacillus thermoglucosidasius C56-YS93 chromosome, completeflagellar protein FliS7e-0856.2
NC_014650:376070:401490401490401888399Geobacillus sp. Y4.1MC1 chromosome, complete genomeflagellar protein FliS7e-0856.2
NC_010424:1857062:187680518768051877209405Candidatus Desulforudis audaxviator MP104C, complete genomeflagellar protein FliS6e-0856.2
NC_019896:577594:592108592108592509402Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeFlagellar protein FliS1e-0755.1
NC_013223:724394:761168761168761626459Desulfohalobium retbaense DSM 5692, complete genomeflagellar protein FliS2e-0754.7
NC_015913:624859:631758631758632138381Candidatus Arthromitus sp. SFB-mouse-Japan, complete genomeflagellar protein FliS2e-0754.3
NC_017195:3426000:343140734314073431808402Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeflagellar protein FliS3e-0753.5
NC_004193:2553630:255922025592202559621402Oceanobacillus iheyensis HTE831, complete genomeflagellar protein FliS3e-0753.5
NC_015425:1207314:121878112187811219182402Clostridium botulinum BKT015925 chromosome, complete genomeflagellar protein FliS8e-0752.4
NC_021182:2921000:293100429310042931390387Clostridium pasteurianum BC1, complete genomeflagellar biosynthetic protein FliS8e-0752.4
NC_015519:924000:930158930158930538381Tepidanaerobacter sp. Re1 chromosome, complete genomeflagellar protein FliS9e-0752.4
NC_010516:2900057:290645729064572906843387Clostridium botulinum B1 str. Okra, complete genomeflagellar protein FliS1e-0652
NC_018870:2232857:225144222514422251834393Thermacetogenium phaeum DSM 12270 chromosome, complete genomeflagellar protein FliS2e-0651.2
NC_014328:1046958:106571010657101066096387Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeflagellar protein FliS3e-0650.4
NC_013791:1082951:108622010862201086618399Bacillus pseudofirmus OF4 chromosome, complete genomeflagellar protein FliS7e-0649.3