Pre_GI: BLASTP Hits

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Query: NC_009381:1682000:1689142 Yersinia pestis Pestoides F chromosome, complete genome

Start: 1689142, End: 1689315, Length: 174

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:2586729:259221025922102592383174Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,transposase1e-25115
NC_008150:844727:889514889514889687174Yersinia pestis Antiqua, complete genomeIS630 ORF1e-25115
NC_008149:2802392:280787328078732808046174Yersinia pestis Nepal516, complete genomeIS630 ORF1e-25115
NC_009438:236424:2372692372692383001032Shewanella putrefaciens CN-32 chromosome, complete genomeIS630 orf1e-21102
NC_012214:1355500:137432213743221374669348Erwinia pyrifoliae Ep1/96, complete genometransposase, fragment7e-2199.4
CU928145:3360967:338933233893323389640309Escherichia coli 55989 chromosome, complete genomeputative transposase (fragment), IS630 family4e-2096.7
NC_011748:3360967:338933233893323389640309Escherichia coli 55989, complete genomeputative transposase (fragment), IS630 family4e-2096.7
NC_007384:2007467:2014725201472520157561032Shigella sonnei Ss046, complete genomeIS630 ORF1e-1995.5
NC_007384:1737885:1748054174805417490851032Shigella sonnei Ss046, complete genomeIS630 ORF1e-1995.5
NC_007384:307013:3185883185883196191032Shigella sonnei Ss046, complete genomeIS630 ORF1e-1995.5
NC_007384:3383983:3383983338398333850141032Shigella sonnei Ss046, complete genomeIS630 ORF1e-1995.5
NC_016822:1818897:1827376182737618284071032Shigella sonnei 53G, complete genomeIS630 orf1e-1995.5
NC_016822:3282654:3298701329870132997321032Shigella sonnei 53G, complete genomeIS630 orf1e-1995.5
NC_007385:157516:1607221607221617531032Shigella sonnei Ss046 plasmid pSS_046, complete sequenceIS630 ORF9e-2095.5
NC_012779:2424967:244799224479922448372381Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-1995.1
NC_011751:2327014:234246623424662342945480Escherichia coli UMN026 chromosome, complete genomeputative transposase2e-1994.4
NC_012214:537000:5410455410455420851041Erwinia pyrifoliae Ep1/96, complete genometransposase4e-1993.2
NC_012214:745302:7522477522477532871041Erwinia pyrifoliae Ep1/96, complete genometransposase4e-1993.2
NC_016822:3485631:3497894349789434989251032Shigella sonnei 53G, complete genomeIS630 orf9e-1992.4
NC_009708:915814:924763924763925350588Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeIS630 family transposase7e-1889.4
NC_005126:5188976:5188976518897651899891014Photorhabdus luminescens subsp. laumondii TTO1, complete genomeTransposase, IS630 family2e-1787.8
NC_012779:2424967:243549724354972436486990Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-1478.6
NC_013421:2613137:262804226280422628872831Pectobacterium wasabiae WPP163, complete genome2e-1374.3
NC_013364:1997891:200453720045372004701165Escherichia coli O111:H- str. 11128, complete genome6e-1372.8
NC_011353:1716037:173496917349691735133165Escherichia coli O157:H7 str. EC4115 chromosome, complete genome6e-1372.8
NC_002655:2264773:227363522736352273799165Escherichia coli O157:H7 EDL933, complete genomeputative transposase (partial)6e-1372.8
NC_003277:22257:3292932929339661038Salmonella typhimurium LT2 plasmid pSLT, complete sequenceputative integrase protein8e-1372.4
NC_016861:22256:3292232922339591038Salmonella enterica subsp. enterica serovar Typhimurium strputative integrase8e-1372.4
NC_013008:1715831:173394717339471734108162Escherichia coli O157:H7 str. TW14359 chromosome, complete genome7e-1372.4
NC_013353:5090696:510537051053705106215846Escherichia coli O103:H2 str. 12009, complete genome2e-1168.2
NC_013353:3627355:364082536408253641670846Escherichia coli O103:H2 str. 12009, complete genome2e-1168.2
NC_013008:3911356:392482739248273925672846Escherichia coli O157:H7 str. TW14359 chromosome, complete genometransposase2e-1168.2
NC_011353:3956630:397010139701013970946846Escherichia coli O157:H7 str. EC4115 chromosome, complete genome2e-1168.2
NC_002655:3919545:393301739330173933862846Escherichia coli O157:H7 EDL933, complete genomeputative transposase2e-1168.2
AP010958:5090696:510537051053705106215846Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-1168.2
AP010958:3627355:364082536408253641670846Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-1168.2
NC_013364:5083949:509798450979845098829846Escherichia coli O111:H- str. 11128, complete genome2e-1168.2
NC_013364:3701895:371481737148173715104288Escherichia coli O111:H- str. 11128, complete genome3e-1167
NC_008253:3941938:398899739889973989359363Escherichia coli 536, complete genomehypothetical protein7e-1165.9
CU928159:30700:448714487145050180Escherichia coli str. 55989 plasmid 55989p, complete genomeputative transposase (fragment), IS630 family5e-1063.2
NC_009348:1347500:1354117135411713551481032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase6e-0959.7
NC_009348:1968826:1977019197701919780501032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-0959.3
NC_009348:2247500:2274776227477622758071032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase7e-0959.3
NC_009348:2631759:2642233264223326432641032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase6e-0959.3
NC_009348:2034500:2045224204522420462551032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase6e-0959.3
NC_009348:3261500:3270842327084232718731032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase6e-0959.3
NC_009348:3261500:3268688326868832697191032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase6e-0959.3
NC_009348:4135002:4157632415763241586631032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase6e-0959.3
NC_009348:2362163:2381760238176023827911032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase6e-0959.3
NC_009348:1475955:1480996148099614820271032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase6e-0959.3
NC_009348:161244:1691281691281701591032Aeromonas salmonicida subsp. salmonicida A449, complete genomeIS630 family transposase6e-0959.3
NC_009350:6987:96149614106451032Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeIS630 family transposase6e-0959.3
NC_012691:2050957:2054975205497520559941020Tolumonas auensis DSM 9187, complete genometransposase, putative1e-0858.5
NC_012691:1144715:1153221115322111542401020Tolumonas auensis DSM 9187, complete genometransposase, putative1e-0858.5
NC_004459:1:562156215965345Vibrio vulnificus CMCP6 chromosome I, complete sequenceTransposase7e-0752.8