Pre_GI: BLASTP Hits

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Query: NC_009092:179226:180822 Shewanella loihica PV-4, complete genome

Start: 180822, End: 181121, Length: 300

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013508:3387272:340198034019803402282303Edwardsiella tarda EIB202, complete genome50S ribosomal protein L239e-27118
NC_017047:370837:383456383456383758303Rahnella aquatilis HX2 chromosome, complete genome50S ribosomal protein L232e-24110
NC_015061:366552:380802380802381104303Rahnella sp. Y9602 chromosome, complete genomeRibosomal protein L25/L232e-24110
NC_013282:3962188:399629939962993996601303Cronobacter turicensis, complete genome50S ribosomal protein L234e-24110
NC_016632:1496000:150992315099231510225303Serratia symbiotica str. 'Cinara cedri' chromosome, complete50S ribosomal protein L232e-21100
NC_016002:379692:390119390119390421303Pseudogulbenkiania sp. NH8B, complete genome50S ribosomal protein L25/L231e-1995.1
NC_017259:523840:536614536614536916303Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,50S ribosomal protein L235e-1993.2
NC_005085:4499500:451349045134904513798309Chromobacterium violaceum ATCC 12472, complete genome50S ribosomal protein L235e-1992.8
NC_004061:540354:559165559165559467303Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome50S ribosomal protein L233e-1890.5
NC_014315:2327083:234498823449882345284297Nitrosococcus watsoni C-113 chromosome, complete genomeRibosomal protein l25/l237e-1889.4
NC_007645:6327428:634353463435346343830297Hahella chejuensis KCTC 2396, complete genomeRibosomal protein L239e-1889
NC_021150:603447:608452608452608751300Azotobacter vinelandii CA6, complete genome50S ribosomal protein L236e-1786.3
NC_012560:603447:608452608452608751300Azotobacter vinelandii DJ, complete genome50S ribosomal protein L236e-1786.3
NC_015731:2950874:297421729742172974552336Nitrosomonas sp. Is79A3 chromosome, complete genome50S ribosomal protein L25/L237e-1785.9
NC_002516:4747154:476571347657134766012300Pseudomonas aeruginosa PAO1, complete genome50S ribosomal protein L232e-1684.3
NC_004545:499709:527650527650527952303Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome50S ribosomal protein L233e-1684
NC_016112:3840053:386196438619643862266303Methylomicrobium alcaliphilum chromosome, complete genome50S ribosomal protein L237e-1682.4
NC_015696:220798:238716238716239015300Francisella sp. TX077308 chromosome, complete genome50S ribosomal protein L23p (L23Ae)1e-1581.6
NC_010336:607145:621699621699621998300Francisella philomiragia subsp. philomiragia ATCC 25017, complete50S ribosomal protein L232e-1581.3
NC_007912:1231436:124623812462381246534297Saccharophagus degradans 2-40, complete genome50S ribosomal protein L234e-1580.1
NC_010677:1621500:163690316369031637202300Francisella tularensis subsp. mediasiatica FSC147, complete genome50S ribosomal protein L236e-1579.7
NC_008369:221382:235405235405235704300Francisella tularensis subsp. holarctica OSU18, complete genomeribosomal protein L236e-1579.7
NC_008601:246583:260687260687260986300Francisella tularensis subsp. novicida U112, complete genome50S ribosomal protein L236e-1579.7
NC_009749:221311:235334235334235633300Francisella tularensis subsp. holarctica FTA, complete genomeribosomal protein L236e-1579.7
NC_007880:221674:235697235697235996300Francisella tularensis subsp. holarctica, complete genome50S ribosomal protein L236e-1579.7
NC_009257:1636633:165258516525851652884300Francisella tularensis subsp. tularensis WY96-3418 chromosome,50S ribosomal protein L236e-1579.7
NC_015222:1047944:106360810636081063943336Nitrosomonas sp. AL212 chromosome, complete genome50S ribosomal protein L25/L235e-1579.7
NC_002528:546500:558310558310558612303Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete50S ribosomal protein L235e-1579.7
NC_011833:545713:559746559746560048303Buchnera aphidicola str. 5A (Acyrthosiphon pisum) chromosome,50S ribosomal protein L235e-1579.7
NC_011834:546738:559524559524559826303Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) chromosome,50S ribosomal protein L235e-1579.7
NC_017253:545177:559208559208559510303Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,50S ribosomal protein L235e-1579.7
NC_017254:545236:559269559269559571303Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) chromosome,50S ribosomal protein L235e-1579.7
NC_017255:545270:559302559302559604303Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) chromosome,50S ribosomal protein L235e-1579.7
NC_013194:3984377:400168340016834001985303Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeRibosomal protein L25/L237e-1579.3
NC_015581:128350:133402133402133698297Thioalkalimicrobium cyclicum ALM1 chromosome, complete genome50S ribosomal protein L25/L231e-1479
NC_003112:149593:153045153045153359315Neisseria meningitidis MC58, complete genome50S ribosomal protein L231e-1478.6
NC_017515:155634:159080159080159400321Neisseria meningitidis M04-240196 chromosome, complete genome50S ribosomal protein L231e-1478.6
NC_017516:149657:153101153101153421321Neisseria meningitidis H44/76 chromosome, complete genome50S ribosomal protein L231e-1478.6
NC_009439:4267356:428502342850234285322300Pseudomonas mendocina ymp, complete genome50S ribosomal protein L232e-1478.2
NC_014909:219498:229374229374229676303Candidatus Blochmannia vafer str. BVAF chromosome, complete genome50S ribosomal protein L232e-1477.8
NC_015572:4209000:422542042254204225719300Methylomonas methanica MC09 chromosome, complete genome50S ribosomal protein L25/L232e-1477.8
NC_017256:545204:559225559225559527303Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,50S ribosomal protein L232e-1477.4
NC_011528:386417:402871402871403158288Coxiella burnetii CbuK_Q154, complete genomeLSU ribosomal protein L23P6e-1476.3
NC_010117:285230:301676301676301963288Coxiella burnetii RSA 331, complete genomeribosomal protein L236e-1476.3
NC_011527:1688447:169566016956601695947288Coxiella burnetii CbuG_Q212, complete genomeLSU ribosomal protein L23P6e-1476.3
NC_009727:1822877:183009118300911830378288Coxiella burnetii Dugway 7E9-12, complete genomeribosomal protein L236e-1476.3
NC_015556:717993:719634719634719936303Pseudomonas fulva 12-X chromosome, complete genomeRibosomal protein L25/L236e-1476.3
NC_008245:324926:338945338945339244300Francisella tularensis subsp. tularensis FSC 198, complete genome50S ribosomal protein L235e-1476.3
NC_006570:324974:338993338993339292300Francisella tularensis subsp. tularensis Schu 4, complete genome50S ribosomal protein L235e-1476.3
NC_016933:324883:338902338902339201300Francisella tularensis TIGB03 chromosome, complete genome50S ribosomal protein L235e-1476.3
NC_016933:400790:414809414809415108300Francisella tularensis TIGB03 chromosome, complete genome50S ribosomal protein L235e-1476.3
NC_016937:324883:338902338902339201300Francisella tularensis subsp. tularensis TI0902 chromosome,50S ribosomal protein L235e-1476.3
NC_011761:292903:294160294160294453294Acidithiobacillus ferrooxidans ATCC 23270 chromosome, complete50S ribosomal protein L231e-1375.1
NC_011206:469901:472674472674472967294Acidithiobacillus ferrooxidans ATCC 53993, complete genomeRibosomal protein L25/L231e-1375.1
NC_015942:2669292:268337726833772683670294Acidithiobacillus ferrivorans SS3 chromosome, complete genome50S ribosomal protein L25/L231e-1375.1
NC_002971:211331:226404226404226691288Coxiella burnetii RSA 493, complete genomeribosomal protein L232e-1374.3
NC_019815:589762:605663605663605959297Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneilarge subunit ribosomal protein L239e-1372.4
NC_004757:427483:454791454791455126336Nitrosomonas europaea ATCC 19718, complete genomeRibosomal L23 protein1e-1272
NC_020299:764526:782801782801783097297Candidatus Kinetoplastibacterium oncopeltii TCC290E, completelarge subunit ribosomal protein L237e-1269.3
NC_014109:393500:431155431155431454300Candidatus Riesia pediculicola USDA chromosome, complete genomeribosomal protein L231e-1168.6
NC_005061:214168:222830222830223129300Candidatus Blochmannia floridanus, complete genome50S ribosomal subunit protein L232e-1167.8
NC_003116:93576:113387113387113707321Neisseria meningitidis Z2491, complete genome50S ribosomal protein L233e-1167.4
NC_015662:385461:395837395837396139303Buchnera aphidicola (Cinara tujafilina) chromosome, complete50S ribosomal protein L233e-1167.4
NC_017505:148644:152102152102152422321Neisseria meningitidis alpha710 chromosome, complete genome50S ribosomal protein L233e-1167.4
NC_017514:2096452:211526121152612115581321Neisseria meningitidis M01-240149 chromosome, complete genome50S ribosomal protein L233e-1167.4
NC_017517:153379:156527156527156847321Neisseria meningitidis M01-240355 chromosome, complete genome50S ribosomal protein L233e-1167.4
NC_017518:150991:154449154449154769321Neisseria meningitidis NZ-05/33 chromosome, complete genome50S ribosomal protein L233e-1167.4
NC_014752:98117:101338101338101658321Neisseria lactamica ST-640, complete genome50S ribosomal protein L233e-1167.4
NC_017512:2087098:210690921069092107223315Neisseria meningitidis WUE 2594, complete genome50S ribosomal protein L233e-1167
NC_017501:147933:152130152130152444315Neisseria meningitidis 8013, complete genome50S ribosomal protein L233e-1167
NC_013016:2014368:203317520331752033495321Neisseria meningitidis alpha14 chromosome, complete genome50S ribosomal protein L234e-1166.6
NC_008344:554229:581712581712582047336Nitrosomonas eutropha C91, complete genomeRibosomal protein L25/L234e-1166.6
NC_008767:136958:140730140730141050321Neisseria meningitidis FAM18, complete genome50S ribosomal protein L231e-1065.5
NC_017513:141291:145063145063145383321Neisseria meningitidis G2136 chromosome, complete genome50S ribosomal protein L231e-1065.5
NC_010645:31500:332703327033566297Bordetella avium 197N, complete genome50S ribosomal protein L232e-1064.7
NC_010120:2029880:204859620485962048910315Neisseria meningitidis 053442, complete genome50S ribosomal protein L232e-1064.3
NC_008609:708886:723950723950724234285Pelobacter propionicus DSM 2379, complete genomeRibosomal protein L25/L233e-1063.9
NC_009465:171000:182940182940183230291Candidatus Vesicomyosocius okutanii HA, complete genome50S ribosomal protein L234e-1063.5
NC_020301:1084993:109577110957711096064294Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genome50S ribosomal protein L234e-1063.2
NC_009483:1253077:127466012746601274944285Geobacter uraniireducens Rf4 chromosome, complete genome50S ribosomal protein L235e-1063.2
NC_021885:16302:333253332533660336Syncytium symbiont of Diaphorina citri, complete genome50S ribosomal protein L239e-1062.4
NC_002939:3108907:312762931276293127913285Geobacter sulfurreducens PCA, complete genomeribosomal protein L231e-0962
NC_010161:1598000:160570816057081606001294Bartonella tribocorum CIP 105476, complete genome50S ribosomal protein L231e-0962
NC_010814:1390817:139664013966401396924285Geobacter lovleyi SZ, complete genomeRibosomal protein L25/L232e-0961.2
NC_020300:960692:977932977932978225294Bartonella australis Aust/NH1, complete genome50S ribosomal protein L233e-0960.8
NC_012846:1467446:148276314827631483056294Bartonella grahamii as4aup, complete genome50S ribosomal protein L233e-0960.5
NC_005956:1139342:115471411547141155007294Bartonella henselae str. Houston-1, complete genome50S ribosomal protein L234e-0960.5
NC_005955:947500:964578964578964871294Bartonella quintana str. Toulouse, complete genome50S ribosomal protein L234e-0960.1
NC_002946:1786000:180499818049981805318321Neisseria gonorrhoeae FA 1090, complete genome50S ribosomal protein L235e-0960.1
NC_014932:985882:102852210285221028812291Bartonella clarridgeiae 73, complete genome50S ribosomal protein L235e-0959.7
NC_010513:542312:549530549530549832303Xylella fastidiosa M12 chromosome, complete genome50S ribosomal protein L238e-0958.9
NC_002488:1099975:111094511109451111256312Xylella fastidiosa 9a5c, complete genome50S ribosomal protein L239e-0958.9
NC_004556:531000:538248538248538550303Xylella fastidiosa Temecula1, complete genome50S ribosomal protein L239e-0958.9
NC_010577:530917:538101538101538403303Xylella fastidiosa M23, complete genomeRibosomal protein L25/L239e-0958.9
NC_017252:545236:559293559293559571279Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) chromosome,50S ribosomal protein L239e-0958.9
NC_018645:4049831:406523540652354065522288Desulfobacula toluolica Tol2, complete genome50S ribosomal protein L23 RplW9e-0958.9
NC_019978:178277:199367199367199657291Halobacteroides halobius DSM 5150, complete genomeribosomal protein L232e-0857.8
NC_008783:671349:686833686833687126294Bartonella bacilliformis KC583, complete genomeribosomal protein L232e-0857.8
NC_014355:1257105:127142912714291271722294Candidatus Nitrospira defluvii, complete genome50S ribosomal protein L233e-0857
NC_008639:2786447:279695027969502797261312Chlorobium phaeobacteroides DSM 266, complete genomeRibosomal protein L25/L234e-0857
NC_011026:1284966:129570012957001296017318Chloroherpeton thalassium ATCC 35110, complete genomeRibosomal protein L25/L236e-0856.2
NC_014758:1546898:155572215557221556003282Calditerrivibrio nitroreducens DSM 19672 chromosome, completeLSU ribosomal protein l23p8e-0855.8
NC_014654:2101500:211127821112782111568291Halanaerobium sp. 'sapolanicus' chromosome, complete genomeRibosomal protein L25/L231e-0755.1
NC_013943:382807:392960392960393241282Denitrovibrio acetiphilus DSM 12809 chromosome, complete genome50S ribosomal protein L251e-0755.1
NC_011145:2190531:219921421992142199507294Anaeromyxobacter sp. K, complete genomeRibosomal protein L25/L232e-0754.7
NC_011891:2264853:227353722735372273830294Anaeromyxobacter dehalogenans 2CP-1, complete genomeRibosomal protein L25/L232e-0754.7
NC_005027:4180502:419406041940604194383324Rhodopirellula baltica SH 1, complete genome50S ribosomal protein L232e-0754.3
NC_013939:1767262:178369917836991783980282Deferribacter desulfuricans SSM1, complete genome50S ribosomal protein L232e-0754.3
NC_011899:124500:137954137954138244291Halothermothrix orenii H 168, complete genomeRibosomal protein L25/L232e-0754.3
NC_017094:828836:872749872749873036288Leptospirillum ferrooxidans C2-3, complete genome50S ribosomal protein L233e-0754.3
NC_004344:622318:627427627427627732306Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein3e-0753.9
NC_010803:2444120:245547824554782455789312Chlorobium limicola DSM 245, complete genomeRibosomal protein L25/L233e-0753.9
NC_014774:1120383:114336511433651143697333Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, complete50S ribosomal protein L234e-0753.5
NC_011035:2027916:203369920336992033983285Neisseria gonorrhoeae NCCP11945 chromosome, complete genome50S ribosomal protein L234e-0753.5
NC_017511:1936331:194211419421141942398285Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genome50S ribosomal protein L234e-0753.5
NC_011059:2233993:224701022470102247339330Prosthecochloris aestuarii DSM 271, complete genomeRibosomal protein L25/L234e-0753.1
NC_016148:698388:699011699011699307297Thermovirga lienii DSM 17291 chromosome, complete genome50S ribosomal protein L235e-0753.1
NC_009675:2177500:218544021854402185733294Anaeromyxobacter sp. Fw109-5 chromosome, complete genome50S ribosomal protein L235e-0753.1
NC_007517:687276:701595701595701879285Geobacter metallireducens GS-15, complete genomeribosomal L23 protein6e-0752.8
NC_013522:1213599:122345412234541223750297Thermanaerovibrio acidaminovorans DSM 6589, complete genomeRibosomal protein L25/L237e-0752.8
NC_007760:2175992:218490721849072185200294Anaeromyxobacter dehalogenans 2CP-C, complete genomeribosomal protein L25/L239e-0752.4
NC_016893:181951:204054204054204356303Wigglesworthia glossinidia endosymbiont of Glossina morsitans50S ribosomal protein L239e-0752.4
NC_016024:1764516:179226017922601792604345Candidatus Chloracidobacterium thermophilum B chromosome chromosome50S ribosomal protein L232e-0651.2
NC_012438:1600534:162119416211941621487294Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genome50S ribosomal protein L233e-0650.4
NC_010644:1491357:150492115049211505217297Elusimicrobium minutum Pei191, complete genomeribosomal protein L25/L233e-0650.4
NC_014148:602864:607022607022607330309Planctomyces limnophilus DSM 3776 chromosome, complete genomeRibosomal protein L25/L234e-0650.1
NC_019814:125611:143599143599143856258Candidatus Kinetoplastibacterium blastocrithidii (ex Strigomonaslarge subunit ribosomal protein L234e-0650.1
NC_003366:2731995:275067027506702750963294Clostridium perfringens str. 13, complete genome50S ribosomal protein L234e-0650.1
NC_008262:2598920:261570326157032615996294Clostridium perfringens SM101, complete genomeribosomal protein L234e-0650.1
NC_008261:2957354:297331529733152973608294Clostridium perfringens ATCC 13124, complete genomeribosomal protein L234e-0650.1