Pre_GI Gene

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Host: NC_015662 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_015662:385461 Buchnera aphidicola (Cinara tujafilina) chromosome, complete

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
38546138608162130S ribosomal protein S4QuickGO ontologyBLASTP
38611138652441430S ribosomal protein S11QuickGO ontologyBLASTP
38652138688636630S ribosomal protein S13QuickGO ontologyBLASTP
38700938712511750S ribosomal protein L36QuickGO ontologyBLASTP
3871553884471293preprotein translocase subunit SecYQuickGO ontologyBLASTP
38849638893043550S ribosomal protein L15QuickGO ontologyBLASTP
38892138911519550S ribosomal subunit protein L30QuickGO ontologyBLASTP
38913138963150130S ribosomal protein S5QuickGO ontologyBLASTP
38965139001936950S ribosomal protein L18QuickGO ontologyBLASTP
39002139056354350S ribosomal protein L6QuickGO ontologyBLASTP
39058939098139330S ribosomal protein S8QuickGO ontologyBLASTP
39103039133530630S ribosomal protein S14QuickGO ontologyBLASTP
39137539195658250S ribosomal protein L5QuickGO ontologyBLASTP
39200539225324950S ribosomal protein L24QuickGO ontologyBLASTP
39223239263940850S ribosomal protein L14QuickGO ontologyBLASTP
39275739300825230S ribosomal protein S17QuickGO ontologyBLASTP
39300539319619250S ribosomal protein L29QuickGO ontology
39320039361041150S ribosomal protein L16QuickGO ontologyBLASTP
39363939432869030S ribosomal protein S3QuickGO ontologyBLASTP
39433139468135150S ribosomal protein L22QuickGO ontologyBLASTP
39471039498827930S ribosomal protein S19QuickGO ontologyBLASTP
39497239582385250S ribosomal protein L2QuickGO ontologyBLASTP
39583739613930350S ribosomal protein L23QuickGO ontologyBLASTP
39613639674160650S ribosomal protein L4QuickGO ontologyBLASTP
39675539739063650S ribosomal protein L3QuickGO ontologyBLASTP
39744139775231230S ribosomal protein S10QuickGO ontologyBLASTP
3980483992321185elongation factor EF-TuQuickGO ontologyBLASTP
3992864013972112elongation factor GQuickGO ontologyBLASTP
40150640197647130S ribosomal protein S7QuickGO ontologyBLASTP
40200040237437530S ribosomal protein S12QuickGO ontologyBLASTP
402465402752288sulfur transfer complex subunit TusBQuickGO ontologyBLASTP
402758403117360sulfur transfer complex subunit TusCQuickGO ontologyBLASTP
403138403524387sulfur transfer complex subunit TusDQuickGO ontologyBLASTP
403998404894897tryptophanyl-tRNA synthetaseQuickGO ontologyBLASTP
405086405754669ribulose-phosphate 3-epimeraseQuickGO ontologyBLASTP
40586140697311133-dehydroquinate synthaseQuickGO ontologyBLASTP
407007407519513shikimate kinase IQuickGO ontologyBLASTP