Pre_GI: BLASTP Hits

Some Help

Query: NC_008536:2961460:2966492 Solibacter usitatus Ellin6076, complete genome

Start: 2966492, End: 2967064, Length: 573

Host Lineage: Solibacter usitatus; Solibacter; Solibacteraceae; Solibacterales; Acidobacteria; Bacteria

General Information: This strain was isolated from a rotationally grazed pasture of perennial ryegrass and white clover in Victoria, Australia. Solibacter usitatus is a member of the Acidobacteria, a group of organisms commonly found in water reservoirs, microbial mats, many different soil types, marine and freshwater sediments, as well as in hot-spring mats and sediments, etc. Furthermore, they sometimes form the dominant group in a habitat. These bacteria are involved in the first step of destruction of biologically complex molecules produced by autotrophic (capable of synthesizing their own nutrients) microorganisms.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_019897:329945:346389346389346979591Thermobacillus composti KWC4 chromosome, complete genomesigma-70 family RNA polymerase sigma factor9e-22103
NC_004193:241480:250169250169250732564Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase sigma-70 factor1e-1582.4
NC_014829:178000:186205186205186768564Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-1579.7
NC_010995:2547164:254810525481052548695591Cellvibrio japonicus Ueda107, complete genomeRNA polymerase sigma-H factor (Sigma-30)5e-1477.4
NC_004129:195347:212505212505213086582Pseudomonas fluorescens Pf-5, complete genomeRNA polymerase sigma-70 factor7e-1477
NC_020272:3706722:372792437279243728487564Bacillus amyloliquefaciens IT-45, complete genomeRNA polymerase sigma factor SigW1e-1376.3
NC_020410:198000:198744198744199307564Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRNA polymerase ECF(Extracytoplasmic function)-type sigma factor W1e-1376.3
NC_014551:199500:199660199660200223564Bacillus amyloliquefaciens DSM 7, complete genomeRNA polymerase ECF(extracytoplasmic function)-type sigma factor W1e-1376.3
NC_017188:177500:177639177639178202564Bacillus amyloliquefaciens TA208 chromosome, complete genomeRNA polymerase sigma factor SigW1e-1376.3
NC_017190:182449:182449182449183012564Bacillus amyloliquefaciens LL3 chromosome, complete genomeRNA polymerase sigma factor1e-1376.3
NC_017191:183500:183549183549184112564Bacillus amyloliquefaciens XH7 chromosome, complete genomeRNA polymerase sigma factor SigW1e-1376.3
NC_010556:141374:154091154091154654564Exiguobacterium sibiricum 255-15, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1375.5
NC_018665:139646:154042154042154605564Exiguobacterium antarcticum B7 chromosome, complete genomeRNA polymerase sigma factor SigW3e-1375.1
NC_016627:762000:776639776639777193555Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-1374.7
NC_014829:1376253:138816813881681388734567Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1272.4
NC_013173:1712138:173775417377541738296543Desulfomicrobium baculatum DSM 4028, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1272.4
NC_012673:1540000:154720815472081547783576Exiguobacterium sp. AT1b, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1272
NC_011566:3994239:399821439982143998792579Shewanella piezotolerans WP3, complete genomeRNA polymerse sigmaE factor2e-1272
NC_009012:3224000:322403932240393224593555Clostridium thermocellum ATCC 27405, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-1270.9
NC_010320:671699:672453672453672983531Thermoanaerobacter sp. X514 chromosome, complete genomeRNA polymerase sigma factor SigY5e-1270.9
NC_012660:165559:186028186028186600573Pseudomonas fluorescens SBW25 chromosome, complete genomeRNA polymerase sigma factor3e-1167.8
NC_009438:1282022:129610312961031296681579Shewanella putrefaciens CN-32 chromosome, complete genomeRNA polymerase sigma factor RpoE4e-1167.8
NC_008750:3435495:343614234361423436720579Shewanella sp. W3-18-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-1167.8
NC_012796:1645856:164776616477661648332567Desulfovibrio magneticus RS-1, complete genomeRNA polymerase ECF-type sigma factor8e-1166.6
NC_008554:1623041:164580616458061646414609Syntrophobacter fumaroxidans MPOB, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1065.5
NC_007517:3151742:315661031566103157230621Geobacter metallireducens GS-15, complete genomeRNA polymerase sigma-70 factor3e-1065.1
NC_012660:1579204:161309716130971613678582Pseudomonas fluorescens SBW25 chromosome, complete genomeRNA polymerase sigma factor AlgU3e-1064.7
NC_014657:1518721:152332215233221523873552Caldicellulosiruptor owensensis OL chromosome, complete genomeRNA polymerase, sigma-24 subunit, ecf subfamily4e-1064.3
NC_007298:2170181:217566021756602176259600Dechloromonas aromatica RCB, complete genomeRNA polymerase sigma-70 factor6e-1063.9
NC_012880:3241886:326005132600513260626576Dickeya dadantii Ech703, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-1063.5
NC_014720:1161841:117795711779571178508552Caldicellulosiruptor kronotskyensis 2002 chromosome, completeRNA polymerase, sigma-24 subunit, ecf subfamily8e-1063.5
NC_014392:969498:100562310056231006174552Caldicellulosiruptor obsidiansis OB47 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0963.2
NC_018679:2211000:223032922303292230931603Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeECF subfamily RNA polymerase sigma-24 factor9e-1063.2
NC_015949:1180755:118484711848471185398552Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0962.8
NC_016906:4123000:413998141399814140532552Gordonia polyisoprenivorans VH2 chromosome, complete genomeRNA polymerase sigma factor1e-0962.8
NC_014721:1777644:178173617817361782287552Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeRNA polymerase, sigma-24 subunit, ecf subfamily2e-0962.4
NC_009523:379705:396061396061396654594Roseiflexus sp. RS-1 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor2e-0962.4
NC_012912:1200000:122636512263651226940576Dickeya zeae Ech1591, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0962
NC_012034:1783912:178800617880061788557552Anaerocellum thermophilum DSM 6725, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0962
NC_012214:1117325:114286111428611143436576Erwinia pyrifoliae Ep1/96, complete genomeRNA polymerase sigma E3e-0961.6
NC_009437:2367842:237191723719172372468552Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeRNA polymerase sigma factor SigY3e-0961.6
NC_016906:1458158:147173414717341472315582Gordonia polyisoprenivorans VH2 chromosome, complete genomesigma-70 family RNA polymerase sigma factor3e-0961.6
NC_014148:3368519:337293333729333373580648Planctomyces limnophilus DSM 3776 chromosome, complete genomeRNA polymerase sigma factor, sigma-70 family3e-0961.6
NC_008435:854576:876605876605877288684Rhodopseudomonas palustris BisA53, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0960.5
NC_014652:1032711:107042510704251070976552Caldicellulosiruptor hydrothermalis 108 chromosome, completeRNA polymerase, sigma-24 subunit, ecf subfamily9e-0960.1
NC_008536:5192235:520608052060805206640561Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0859.7
NC_006270:568171:592922592922593419498Bacillus licheniformis ATCC 14580, complete genomeRNA polymerase ECF(extracytoplasmic function)-type sigma factor (sigma-V)1e-0859.3
NC_006322:567987:592712592712593209498Bacillus licheniformis ATCC 14580, complete genomeSigV1e-0859.3
NC_010172:480000:497599497599498279681Methylobacterium extorquens PA1, complete genomeRNA polymerase sigma factor, sigma-70 family1e-0859.3
NC_011725:1032500:104531410453141045847534Bacillus cereus B4264 chromosome, complete genomeRNA polymerase factor sigma C2e-0858.9
NC_019673:3041936:304282330428233043461639Saccharothrix espanaensis DSM 44229 complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.9
NC_021184:3174500:320020332002033200760558Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, sigma-70 family2e-0858.9
NC_011916:2967624:299003329900332990593561Caulobacter crescentus NA1000 chromosome, complete genomeRNA polymerase sigma factor2e-0858.9
NC_002696:2941644:296405329640532964613561Caulobacter crescentus CB15, complete genomeRNA polymerase sigma-70 factor2e-0858.9
NC_012660:3689223:370480737048073705265459Pseudomonas fluorescens SBW25 chromosome, complete genomeputative RNA polymerase sigma factor2e-0858.5
NC_010475:2188827:218983121898312190430600Synechococcus sp. PCC 7002, complete genometranscription initiation factor sigma E3e-0858.2
NC_016048:3063888:308588730858873086366480Oscillibacter valericigenes Sjm18-20, complete genomeRNA polymerase ECF subfamily sigma factor3e-0858.2
NC_011961:304158:307073307073307639567Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily4e-0857.8
NC_010511:7553703:757897775789777579660684Methylobacterium sp. 4-46 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor5e-0857.4
NC_013093:2230171:223517522351752235852678Actinosynnema mirum DSM 43827, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0857.4
NC_004459:1794540:181002018100201810580561Vibrio vulnificus CMCP6 chromosome I, complete sequenceRNA polymerase sigma-70 factor5e-0857.4
NC_011757:1067543:107244910724491073129681Methylobacterium chloromethanicum CM4, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0857.4
NC_012811:139498:143577143577144257681Methylobacterium extorquens AM1 megaplasmid, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily6e-0857.4
NC_012491:5914500:591721659172165917788573Brevibacillus brevis NBRC 100599, complete genomeRNA polymerase ECF-type sigma factor1e-0756.6
NC_013440:1727134:174839817483981749084687Haliangium ochraceum DSM 14365, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0756.6
NC_021150:2315362:232812623281262328692567Azotobacter vinelandii CA6, complete genomeRNA polymerase sigma factor SigX9e-0856.6
NC_012560:2315350:232811423281142328680567Azotobacter vinelandii DJ, complete genomeRNA polymerase sigma-70 factor9e-0856.6
NC_016631:5378810:537881053788105379649840Granulicella mallensis MP5ACTX8 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0756.2
NC_009342:951761:964659964659965279621Corynebacterium glutamicum R chromosome, complete genomeRNA polymerase sigma factor RpoE1e-0755.8
NC_003450:788000:804408804408805028621Corynebacterium glutamicum ATCC 13032, complete genomeRNA polymerase sigma factor RpoE1e-0755.8
NC_014098:2225174:224373822437382244325588Bacillus tusciae DSM 2912 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0755.8
NC_021184:3149000:315104331510433151618576Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, sigma-70 family1e-0755.8
NC_012704:1747539:176790617679061768508603Corynebacterium kroppenstedtii DSM 44385, complete genomeECF-family sigma factor H2e-0755.5
NC_013730:1572889:158410515841051584656552Spirosoma linguale DSM 74, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0755.5
NC_011831:2795819:281678328167832817325543Chloroflexus aggregans DSM 9485, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0755.5
NC_016627:689406:701226701226701768543Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor2e-0755.5
NC_011831:2795819:281874228187422819284543Chloroflexus aggregans DSM 9485, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0755.1
NC_011886:1891077:190513119051311905970840Arthrobacter chlorophenolicus A6, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0754.7
NC_011831:2795819:281553728155372816079543Chloroflexus aggregans DSM 9485, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0754.7
NC_010505:5967324:597965759796575980331675Methylobacterium radiotolerans JCM 2831, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0754.3
NC_013406:2866000:2867473286747328686931221Paenibacillus sp. Y412MC10 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor5e-0754.3
NC_004557:558500:573257573257573847591Clostridium tetani E88, complete genomeRNA polymerase sigma-70 factor5e-0754.3
NC_014355:3669470:367093436709343671530597Candidatus Nitrospira defluvii, complete genomeRNA polymerase sigma factor SigK (Sigma-K)5e-0754.3
NC_009668:1726000:173066117306611731212552Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceECF subfamily RNA polymerase sigma-24 factor4e-0754.3
NC_016109:62000:940019400194678678Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor4e-0754.3
NC_016109:8664974:868860186886018689278678Kitasatospora setae KM-6054, complete genomeputative RNA polymerase ECF subfamily sigma factor4e-0754.3
NC_012483:1567253:158365615836561584234579Acidobacterium capsulatum ATCC 51196, complete genomeRNA polymerase sigma-70 factor, ECF subfamily5e-0753.9
NC_004193:3215500:321633632163363216875540Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase ECF-type sigma factor6e-0753.9
NC_011894:4911500:492350949235094924204696Methylobacterium nodulans ORS 2060, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0753.9
NC_015673:464630:467907467907468443537Corynebacterium resistens DSM 45100 chromosome, complete genomeECF-family sigma factor W7e-0753.5
NC_007963:1190847:124467112446711245285615Chromohalobacter salexigens DSM 3043, complete genomesigma-24 (FecI-like)1e-0653.1
NC_009050:604950:619640619640620254615Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily1e-0653.1
NC_009952:3596399:360359636035963604171576Dinoroseobacter shibae DFL 12, complete genomeRNA polymerase sigma factor1e-0653.1
NC_011831:2795819:281806128180612818645585Chloroflexus aggregans DSM 9485, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0653.1
NC_014311:1106871:112273411227341123375642Ralstonia solanacearum PSI07 chromosome, complete genomeRNA polymerase sigma factor, sigma-241e-0652.8
NC_002936:149100:163656163656164207552Dehalococcoides ethenogenes 195, complete genomeRNA polymerase sigma factor SigW, putative1e-0652.8
NC_011831:2795819:281387728138772814461585Chloroflexus aggregans DSM 9485, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652.4
NC_017208:1050414:106404110640411064574534Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeRNA polymerase ECF-type sigma factor2e-0652.4
NC_006274:1040836:105320610532061053739534Bacillus cereus E33L, complete genomeRNA polymerase sigma C factor2e-0652.4
NC_008536:5192235:520295352029535203483531Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652
NC_011831:2795819:281316328131632813747585Chloroflexus aggregans DSM 9485, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652
NC_014328:3294086:329497232949723295487516Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeRNA polymerase sigma-E factor2e-0652
NC_009921:4757148:477616347761634776723561Frankia sp. EAN1pec, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0652
NC_014932:1232346:130281113028111303365555Bartonella clarridgeiae 73, complete genomeRNA polymerase sigma factor, ecr subfamily3e-0652
NC_015953:4908069:492497149249714925813843Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-0651.6
NC_019896:1483073:148418814841881484718531Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeRNA polymerase sigma factor SigZ3e-0651.6
NC_005956:1572500:159013115901311590685555Bartonella henselae str. Houston-1, complete genomeRNA polymerase sigma-70 factor3e-0651.6
NC_017200:1157835:117323311732331173853621Bacillus thuringiensis serovar finitimus YBT-020 chromosome,RNA polymerase factor sigma C3e-0651.6
NC_011969:1084000:109474110947411095211471Bacillus cereus Q1 chromosome, complete genomeRNA polymerase factor sigma c3e-0651.6
NC_016609:6136411:615649361564936157086594Niastella koreensis GR20-10 chromosome, complete genomeRNA polymerase, sigma subunit, SigX3e-0651.6
NC_019897:3810000:385687138568713857380510Thermobacillus composti KWC4 chromosome, complete genomeSigM family RNA polymerase sigma factor4e-0651.2
NC_011773:1050000:106249510624951063028534Bacillus cereus AH820 chromosome, complete genomeRNA polymerase factor sigma C4e-0651.2
NC_013929:3953046:396964339696433970329687Streptomyces scabiei 87.22 chromosome, complete genomesigma factor4e-0651.2
NC_007530:1007140:102029010202901020823534Bacillus anthracis str. 'Ames Ancestor', complete genomeRNA polymerase sigma C factor4e-0651.2
NC_008600:1042477:105546210554621055995534Bacillus thuringiensis str. Al Hakam, complete genomeRNA polymerase sigma-70 factor, ECF subfamily4e-0651.2
NC_005957:1037205:104952510495251050058534Bacillus thuringiensis serovar konkukian str. 97-27, completeRNA polymerase sigma C factor4e-0651.2
NC_003997:1007139:102029010202901020823534Bacillus anthracis str. Ames, complete genomeRNA polymerase sigma C factor4e-0651.2
NC_012659:1008028:102019010201901020723534Bacillus anthracis str. A0248, complete genomeRNA polymerase factor sigma C4e-0651.2
NC_016779:991298:100202010020201002553534Bacillus cereus F837/76 chromosome, complete genomeECF subfamily RNA polymerase sigma-70 factor4e-0651.2
NC_014829:4422314:442603644260364426554519Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0651.2
NC_012590:193895:211507211507212055549Corynebacterium aurimucosum ATCC 700975, complete genomeECF-family sigma factor C4e-0651.2
NC_014655:2782707:278688527868852787409525Leadbetterella byssophila DSM 17132 chromosome, complete genomeRNA polymerase, sigma subunit, ecf family6e-0650.8
NC_008700:2451798:247336124733612474008648Shewanella amazonensis SB2B, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0650.8
NC_005945:1008000:102009610200961020716621Bacillus anthracis str. Sterne, complete genomeRNA polymerase sigma C factor5e-0650.8
NC_012982:711122:746813746813747382570Hirschia baltica ATCC 49814, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0650.8
NC_016803:1646342:166923316692331669781549Desulfovibrio desulfuricans ND132 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit5e-0650.8
NC_015311:2626850:266808926680892668571483Prevotella denticola F0289 chromosome, complete genomeSigma-70 region 26e-0650.4
NC_011831:2795819:281459128145912815133543Chloroflexus aggregans DSM 9485, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-0650.4
NC_012811:959725:963246963246963947702Methylobacterium extorquens AM1 megaplasmid, complete sequenceRNA polymerase ECF-type sigma factor9e-0650.1
NC_020301:1486695:150583015058301506384555Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeRNA polymerase sigma factor1e-0549.7