Pre_GI: BLASTP Hits

Some Help

Query: NC_007337:10464:21669 Ralstonia eutropha JMP134 plasmid 1, complete sequence

Start: 21669, End: 22781, Length: 1113

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014641:20103:2290822908240201113Achromobacter xylosoxidans A8 plasmid pA81, complete sequencechloromuconate cycloisomerase7e-138490
NC_010170:3944228:3958433395843339595451113Bordetella petrii, complete genomeChloromuconate cycloisomerase7e-138490
NC_010170:1580832:1582665158266515837771113Bordetella petrii, complete genomemuconate cycloisomerase I5e-133474
NC_007951:3631772:3651060365106036521721113Burkholderia xenovorans LB400 chromosome 1, complete sequenceChloromuconate cycloisomerase5e-133474
NC_011002:564654:5676085676085687441137Burkholderia cenocepacia J2315 chromosome 3, complete sequencemuconate cycloisomerase I 23e-78292
NC_002947:4167500:4237124423712442382451122Pseudomonas putida KT2440, complete genomemuconate cycloisomerase1e-74280
NC_007492:3384077:3399964339996434010851122Pseudomonas fluorescens PfO-1, complete genomeMandelate racemase/muconate lactonizing enzyme4e-73275
NC_011740:1494796:1516005151600515172071203Escherichia fergusonii ATCC 35469, complete genomeMuconate cycloisomerase I (Cis,cis-muconate lactonizing enzyme I) (MLE)6e-72271
NC_020209:1949500:1971604197160419727311128Pseudomonas poae RE*1-1-14, complete genomemuconate cycloisomerase 14e-72271
NC_010552:592154:6173636173636184961134Burkholderia ambifaria MC40-6 chromosome 2, complete sequencemuconate and chloromuconate cycloisomerase8e-72270
NC_017986:5833819:5837087583708758382201134Pseudomonas putida ND6 chromosome, complete genomeCatB1e-70266
NC_007337:10464:3120931209324111203Ralstonia eutropha JMP134 plasmid 1, complete sequenceMuconate cycloisomerase8e-65247
NC_015312:3290887:3303947330394733050681122Pseudonocardia dioxanivorans CB1190 chromosome, complete genomemuconate and chloromuconate cycloisomerase8e-62237
NC_010170:3944228:394356639435663944231666Bordetella petrii, complete genomemuconate cycloisomerase2e-36153
NC_014118:1592000:1610405161040516115771173Burkholderia sp. CCGE1002 chromosome chromosome 2, completeMandelate racemase/muconate lactonizing protein2e-31136
NC_003911:3864852:3869173386917338703031131Silicibacter pomeroyi DSS-3, complete genomemuconate cycloisomerase I8e-30131
NC_015136:2282488:2321268232126823224281161Burkholderia sp. CCGE1001 chromosome 1, complete sequencemandelate racemase/muconate lactonizing protein2e-29130
NC_007948:4646344:4647276464727646484571182Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme3e-29129
NC_016023:1658377:1660267166026716613311065Bacillus coagulans 36D1 chromosome, complete genomemandelate racemase/muconate lactonizing protein1e-28127
NC_014376:693820:7121477121477132501104Clostridium saccharolyticum WM1 chromosome, complete genomeMandelate racemase/muconate lactonizing protein2e-28126
NC_017068:1327025:1330760133076013318511092Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative chloromuconate cycloisomerase5e-28125
NC_013757:1343396:1359369135936913604721104Geodermatophilus obscurus DSM 43160, complete genomeMandelate racemase/muconate lactonizing protein3e-27122
NC_012673:77610:9578795787969171131Exiguobacterium sp. AT1b, complete genomeMandelate racemase/muconate lactonizing protein1e-26120
NC_014614:260782:2744012744012755041104Clostridium sticklandii, complete genomeputative muconate cycloisomerase2e-26120
NC_008699:857837:8769608769608780631104Nocardioides sp. JS614, complete genomeMandelate racemase/muconate lactonizing enzyme, N-terminal domain protein2e-25117
NC_003454:63500:9750597505986321128Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeO-succinylbenzoate-CoA synthase5e-24112
NC_013741:1196997:1199986119998612010651080Archaeoglobus profundus DSM 5631, complete genomeMandelate racemase/muconate lactonizing protein8e-24111
NC_015873:238187:2559092559092570031095Megasphaera elsdenii DSM 20460, complete genomemandelate racemase/muconate lactonizing enzyme1e-22107
NC_010170:3908500:394141639414163941949534Bordetella petrii, complete genomeputative Enolase2e-1997.1
NC_012850:3454270:3455189345518934563341146Rhizobium leguminosarum bv. trifolii WSM1325, complete genomeMandelate racemase/muconate lactonizing protein1e-1894
NC_012726:2143670:2154817215481721560191203Sulfolobus islandicus M.16.4 chromosome, complete genomemandelate racemase/muconate lactonizing protein5e-1892.4
NC_014958:3393855:3396376339637633974821107Deinococcus maricopensis DSM 21211 chromosome, complete genomeo-succinylbenzoic acid (OSB) synthetase7e-1892
NC_007181:1766910:1776768177676817778861119Sulfolobus acidocaldarius DSM 639, complete genomemandelate racemase/muconate lactonizing enzyme1e-1790.9
NC_003888:3817000:3835870383587038370031134Streptomyces coelicolor A3(2), complete genomeisomerase1e-1687.8
NC_002678:6061448:6083376608337660845601185Mesorhizobium loti MAFF303099, complete genomechloromuconate cycloisomerase4e-1685.9
NC_007963:2777066:2793703279370327949711269Chromohalobacter salexigens DSM 3043, complete genomemandelate racemase/muconate lactonizing enzyme2e-1584
NC_012880:3748665:3786817378681737879291113Dickeya dadantii Ech703, complete genomeMandelate racemase/muconate lactonizing protein3e-1583.2
NC_019978:2532640:2540084254008425412321149Halobacteroides halobius DSM 5150, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase3e-1583.2
NC_013923:45876:4479744797458791083Natrialba magadii ATCC 43099 plasmid pNMAG01, complete sequenceMandelate racemase/muconate lactonizing protein5e-1582.4
NC_002607:795777:822719822719823564846Halobacterium sp. NRC-1, complete genomeYkfB21e-1480.9
NC_010364:787766:814708814708815703996Halobacterium salinarum R1, complete genomeO-succinylbenzoate synthase2e-1480.1
NC_007963:2777066:2782685278268527838211137Chromohalobacter salexigens DSM 3043, complete genomemandelate racemase/muconate lactonizing enzyme2e-1480.1
NC_013966:399215:4359574359574370121056Haloferax volcanii DS2 plasmid pHV4, complete sequencemandelate racemase / muconate lactonizing enzyme homolog2e-1480.1
NC_013517:1038000:1039918103991810411171200Sebaldella termitidis ATCC 33386, complete genomeMandelate racemase/muconate lactonizing protein3e-1479.7
NC_008010:200796:2158792158792170271149Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceMandelate racemase/muconate lactonizing enzyme-like4e-1479.3
NC_014841:131308:1493361493361504481113Pantoea sp. At-9b plasmid pPAT9B04, complete sequenceMandelate racemase/muconate lactonizing protein5e-1479
NC_009256:3056000:3075584307558430767321149Burkholderia vietnamiensis G4 chromosome 1, complete sequencegalactonate dehydratase5e-1479
NC_006510:1995916:1999092199909220002401149Geobacillus kaustophilus HTA426, complete genomegalactonate dehydratase7e-1478.6
NC_007963:3553678:3562167356216735633391173Chromohalobacter salexigens DSM 3043, complete genomemandelate racemase/muconate lactonizing enzyme1e-1377.8
NC_015954:1222776:1224258122425812253011044Halophilic archaeon DL31 chromosome, complete genomeMandelate racemase/muconate lactonizing protein1e-1377.8
NC_014839:12519:172471724718019773Pantoea sp. At-9b plasmid pPAT9B02, complete sequence2e-1377
NC_012632:816000:8286828286828298841203Sulfolobus islandicus M.16.27 chromosome, complete genomemandelate racemase/muconate lactonizing protein3e-1376.6
NC_009440:1045882:1054839105483910559811143Metallosphaera sedula DSM 5348 chromosome, complete genomemandelate racemase/muconate lactonizing protein3e-1376.6
NC_014550:3534000:3547607354760735487551149Arthrobacter arilaitensis Re117, complete genomegalactonate dehydratase5e-1375.5
NC_014500:564864:5660205660205673661347Dickeya dadantii 3937 chromosome, complete genomemandelate racemase/muconate lactonizing enzyme family protein7e-1375.1
NC_009718:1771500:1784423178442317854511029Fervidobacterium nodosum Rt17-B1, complete genomemandelate racemase/muconate lactonizing protein1e-1274.7
NC_007948:4558000:4596945459694545981051161Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme2e-1273.9
NC_014298:310964:3400563400563413211266Halalkalicoccus jeotgali B3 plasmid 1, complete sequenceMandelate racemase/muconate lactonizing protein2e-1273.6
NC_011959:1965158:1975415197541519766771263Thermomicrobium roseum DSM 5159, complete genomemandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme3e-1273.2
NC_015968:3053565:3058766305876630599201155Enterobacter asburiae LF7a chromosome, complete genomeMandelate racemase/muconate lactonizing protein4e-1272.8
NC_017047:2957957:2959435295943529605831149Rahnella aquatilis HX2 chromosome, complete genomegalactonate dehydratase4e-1272.8
NC_013510:2782240:279655227965522797511960Thermomonospora curvata DSM 43183, complete genomeMandelate racemase/muconate lactonizing protein4e-1272.8
NC_015061:2927707:2929186292918629303341149Rahnella sp. Y9602 chromosome, complete genomeMandelate racemase/muconate lactonizing protein4e-1272.8
NC_002678:6061448:6084562608456260856651104Mesorhizobium loti MAFF303099, complete genomemuconate lactonizing enzyme6e-1272.4
NC_007948:517893:5355515355515366451095Polaromonas sp. JS666, complete genomemandelate racemase/muconate lactonizing enzyme1e-1171.2
NC_011740:1494796:1510509151050915117171209Escherichia fergusonii ATCC 35469, complete genomeputative mandelate racemase1e-1170.9
NC_014363:8228:1919219192203371146Olsenella uli DSM 7084 chromosome, complete genomeMandelate racemase/muconate lactonizing protein1e-1170.9
NC_008786:3045770:3053931305393130551271197Verminephrobacter eiseniae EF01-2, complete genomeMandelate racemase/muconate lactonizing enzyme, N-terminal domain protein2e-1170.5
NC_010617:558954:5817775817775827901014Kocuria rhizophila DC2201, complete genomeputative o-succinylbenzoate synthase3e-1170.1
NC_014923:5940500:5959999595999959611051107Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeMandelate racemase/muconate lactonizing protein4e-1169.3
NC_019973:5869500:5888959588895958900651107Mesorhizobium australicum WSM2073, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase4e-1169.3
NC_015675:6493444:6514670651467065157761107Mesorhizobium opportunistum WSM2075 chromosome, complete genomemandelate racemase/muconate lactonizing protein4e-1169.3
NC_013174:562856:575260575260576216957Jonesia denitrificans DSM 20603, complete genomeMandelate racemase/muconate lactonizing protein6e-1168.9
NC_014119:977136:9923849923849936731290Burkholderia sp. CCGE1002 chromosome chromosome 3, completeMandelate racemase/muconate lactonizing protein6e-1168.9
NC_015571:801715:8202818202818213511071Porphyromonas gingivalis TDC60, complete genomemandelate racemase/muconate lactonizing enzyme family protein6e-1168.9
NC_016610:2077603:2080176208017620812491074Tannerella forsythia ATCC 43037 chromosome, complete genomeputative o-succinylbenzoate synthase6e-1168.6
NC_003911:2540453:2565441256544125666101170Silicibacter pomeroyi DSS-3, complete genomemandelate racemase/muconate lactonizing enzyme family protein7e-1168.6
NC_013740:2218215:2231462223146222326251164Acidaminococcus fermentans DSM 20731, complete genomeMandelate racemase/muconate lactonizing protein7e-1168.6
NC_019791:570923:5709235709235720561134Caldisphaera lagunensis DSM 15908 chromosome, complete genomeo-succinylbenzoic acid synthetase1e-1067.8
NC_010676:2720068:2731170273117027323031134Burkholderia phytofirmans PsJN chromosome 2, complete sequenceMandelate racemase/muconate lactonizing protein1e-1067.8
NC_009033:791515:7970957970957982101116Staphylothermus marinus F1, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein2e-1067.4
NC_012588:742000:7617737617737628851113Sulfolobus islandicus M.14.25 chromosome, complete genomemandelate racemase/muconate lactonizing protein2e-1067.4
NC_002950:1571383:1599190159919016002601071Porphyromonas gingivalis W83, complete genomemandelate racemase/muconate lactonizing enzyme family protein2e-1067
NC_017093:3777178:3783389378338937844891101Actinoplanes missouriensis 431, complete genomeputative mandelate racemase/muconate lactonizing enzyme-like protein2e-1067
NC_013158:363222:3863923863923874201029Halorhabdus utahensis DSM 12940, complete genomeMandelate racemase/muconate lactonizing protein3e-1066.6
NC_008025:1768756:1785150178515017862381089Deinococcus geothermalis DSM 11300, complete genomeMandelate racemase/muconate lactonizing enzyme-like protein3e-1066.2
NC_007952:3196085:3229683322968332307621080Burkholderia xenovorans LB400 chromosome 2, complete sequencePutative mandelate racemase (MdlA)5e-1065.9
NC_008319:787881:7904647904647914891026Synechococcus sp. CC9311, complete genomeMandelate racemase / muconate lactonizing enzyme, N-terminal domain protein5e-1065.9
NC_009379:435404:4563424563424574751134Polynucleobacter sp. QLW-P1DMWA-1, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein5e-1065.5
NC_019974:2421422:2444798244479824460361239Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase6e-1065.5
NC_003888:3817000:3843523384352338446081086Streptomyces coelicolor A3(2), complete genomeracemase7e-1065.5
NC_012521:148886:1544261544261554301005Rhodococcus opacus B4 plasmid pROB02, complete sequenceputative dipeptide epimerase8e-1065.1
NC_020126:7255111:726127972612797262265987Myxococcus stipitatus DSM 14675, complete genomemandelate racemase/muconate lactonizing enzyme family protein1e-0964.7
NC_021182:2013500:2014892201489220160011110Clostridium pasteurianum BC1, complete genomeo-succinylbenzoic acid synthetase2e-0963.9
NC_011094:1726000:174767817476781748643966Salmonella enterica subsp. enterica serovar Schwarzengrund strmandelate racemase / muconate lactonizing enzyme, N- domain-containing protein3e-0963.2
NC_010498:1094000:1110613111061311117611149Escherichia coli SMS-3-5, complete genomemandelate racemase/muconate lactonizing enzyme family protein3e-0963.2
NC_011080:1750000:177085917708591771824966Salmonella enterica subsp. enterica serovar Newport str. SL254,mandelate racemase / muconate lactonizing enzyme, N- domain protein4e-0962.8
NC_006905:1766000:178763717876371788602966Salmonella enterica subsp. enterica serovar Choleraesuis strputative chloromuconate cycloisomerase (muconate cycloisomerase)4e-0962.8
NC_003197:1753663:177450317745031775468966Salmonella typhimurium LT2, complete genomeputative chloromuconate cycloisomerase4e-0962.8
NC_016810:1709695:173135717313571732322966Salmonella enterica subsp. enterica serovar Typhimurium strputative mandelate racemase / muconate lactonizing enzyme family protein4e-0962.8
NC_016856:1763640:178448117844811785446966Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative chloromuconate cycloisomerase4e-0962.8
NC_016857:1709695:173135717313571732322966Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74L-Ala-D/L-Glu epimerase4e-0962.8
NC_016860:1752000:177219417721941773159966Salmonella enterica subsp. enterica serovar Typhimurium strputative chloromuconate cycloisomerase4e-0962.8
NC_016863:1711832:173267317326731733638966Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative chloromuconate cycloisomerase4e-0962.8
NC_017046:1709578:173124017312401732205966Salmonella enterica subsp. enterica serovar Typhimurium str. 798mandelate racemase / muconate lactonizing enzyme family protein4e-0962.8
NC_013440:8405719:8426347842634784273691023Haliangium ochraceum DSM 14365, complete genomeMandelate racemase/muconate lactonizing protein4e-0962.8
NC_011887:72364:8731387313885031191Methylobacterium nodulans ORS 2060 plasmid pMNOD02, completeMandelate racemase/muconate lactonizing protein4e-0962.8
NC_012731:2261787:2263456226345622644841029Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeL-Ala-D/L-Glu epimerase4e-0962.8
NC_021066:1778000:179252217925221793487966Raoultella ornithinolytica B6, complete genomeL-Ala-D/L-Glu epimerase5e-0962.4
NC_004193:2921103:2926661292666129278361176Oceanobacillus iheyensis HTE831, complete genomemuconate cycloisomerase6e-0962
NC_013198:394000:4344884344884356211134Lactobacillus rhamnosus GG, complete genomeenolase superfamily protein, N-acylamino acid racemase, mandelate racemase/muconate lactonizing enzyme / o-succinylbenzoate synthase1e-0861.6
NC_003228:3212500:3220355322035532213711017Bacteroides fragilis NCTC 9343, complete genomeputative muconate cycloisomerase1e-0861.2
NC_020181:969599:970208970208971173966Enterobacter aerogenes EA1509E, complete genomeL-alanine-DL-glutamate epimerase2e-0860.5
NC_014541:643604:6616346616346627551122Ferrimonas balearica DSM 9799 chromosome, complete genomeMandelate racemase/muconate lactonizing protein2e-0860.5
NC_004631:1623511:164518116451811646146966Salmonella enterica subsp. enterica serovar Typhi Ty2, completemuconate lactonizing enzyme family protein2e-0860.5
NC_014973:3690371:3723736372373637248451110Geobacter sp. M18 chromosome, complete genomeMandelate racemase/muconate lactonizing protein2e-0860.1
NC_015663:4447984:446593144659314466896966Enterobacter aerogenes KCTC 2190 chromosome, complete genomeL-Ala-D/L-Glu epimerase3e-0860.1
NC_009792:1345500:135720813572081358173966Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein4e-0859.7
NC_019974:1184871:1201337120133712024221086Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase5e-0859.3
NC_009664:4696961:4757316475731647584161101Kineococcus radiotolerans SRS30216, complete genomeMandelate racemase/muconate lactonizing protein5e-0858.9
NC_017082:6444522:6446279644627964473701092Bradyrhizobium sp. S23321, complete genomemandelate racemase7e-0858.5
NC_012917:3241196:324279132427913243771981Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeMandelate racemase/muconate lactonizing protein1e-0758.2
NC_010515:1375091:1402457140245714036381182Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceMandelate racemase/muconate lactonizing protein1e-0757.8
NC_007298:1721425:173357117335711734527957Dechloromonas aromatica RCB, complete genomeMandelate racemase/muconate lactonizing enzyme2e-0757.4
NC_008786:2573558:2577007257700725781161110Verminephrobacter eiseniae EF01-2, complete genomeMandelate racemase/muconate lactonizing enzyme, C-terminal domain protein2e-0757
NC_015556:4118304:4141558414155841427121155Pseudomonas fulva 12-X chromosome, complete genomeMandelate racemase/muconate lactonizing protein4e-0755.8
NC_003909:4614789:4620609462060946217151107Bacillus cereus ATCC 10987, complete genomeN-acylamino acid racemase6e-0755.5
NC_015711:7265439:7270641727064172717591119Myxococcus fulvus HW-1 chromosome, complete genomemandelate racemase/muconate lactonizing enzyme family protein7e-0755.5
NC_006396:508802:5107795107795120291251Haloarcula marismortui ATCC 43049 chromosome I, complete sequencemandelate racemase/muconate lactonizing enzyme family9e-0755.1
NC_011992:1912200:1912200191220019135071308Acidovorax ebreus TPSY, complete genomeMandelate racemase/muconate lactonizing protein8e-0755.1
NC_008541:2119883:2139544213954421407311188Arthrobacter sp. FB24 chromosome 1, complete sequenceMandelate racemase/muconate lactonizing enzyme, N-terminal domain protein1e-0654.7
NC_015151:665346:6873766873766884791104Vulcanisaeta moutnovskia 768-28 chromosome, complete genomemandelate racemase/muconate lactonizing enzyme, C-terminal domain protein1e-0654.7
NC_016779:4588000:4596265459626545973711107Bacillus cereus F837/76 chromosome, complete genomeO-succinylbenzoate-CoA synthase2e-0653.9
NC_016745:1472000:1477793147779314789741182Oceanimonas sp. GK1 chromosome, complete genomemandelate racemase/muconate lactonizing protein6e-0652.4
NC_018000:1914945:1956256195625619573711116Sinorhizobium fredii USDA 257 chromosome, complete genomeL-alanine-DL-glutamate epimerase-like protein6e-0652.4
NC_011725:4799905:4806860480686048079661107Bacillus cereus B4264 chromosome, complete genomeN-acylamino acid racemase7e-0652
NC_003305:1297785:1319671131967113208581188Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein7e-0652
NC_019974:1184871:1230980123098012321311152Natronococcus occultus SP4, complete genomeenolase superfamily enzyme related to L-alanine-DL-glutamate epimerase9e-0651.6