Pre_GI: BLASTP Hits

Some Help

Query: NC_005126:4824500:4830652 Photorhabdus luminescens subsp. laumondii TTO1, complete genome

Start: 4830652, End: 4831245, Length: 594

Host Lineage: Photorhabdus luminescens; Photorhabdus; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated on Trinidad and Tobago. It is a symbiont of the nematode Heterorhabditis bacteriophora. Bioluminescent bacterium. This organism is unusual in that it is symbiotic within one insect, and pathogenic in another, the only organism that is known to exhibit this dual phenotype. Enzymes are then released by the bacteria that result in rapid degradation of the insect body, allowing both bacteria and nematode to feed and reproduce. During this period Photorhabdus luminescens releases bacteriocidal products, including antibiotics and bacteriocins, that prevent infection of the larva by competitive microbes. The result is promotion of Photorhabdus luminescens-nematode interactions that result in continuation of the symbiotic relationship. In order to engage in a symbiotic relationship with the nematode and a pathogenic one with the insect larva, the bacterium encodes specific factors that encourage both. These include a large number of genes that code for secreted toxins and enzymes, as well as genes that encode products for the production of antibiotics and bacteriocins. Secretion of these products occurs by an array of systems including type I, type II, and type III secretion systems. The type III system is closely related to the Yersinia plasmid-encoded type III system. Genes that promote symbiotic relationships are also encoded on genomic islands on the chromosome including some that affect nematode development. Virulence genes appear to be active during exponential growth. Symbiotic genes appear to function during stationary phase (post-exponential) growth. The switch from one state to another is controlled. Photorhabdus luminescens is capable of giving off light, a complex process that requires the products of the lux operon.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:644384:647399647399647974576Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,putative transcriptional regulator4e-70263
NC_010159:741819:744834744834745409576Yersinia pestis Angola, complete genometranscriptional regulator, TetR family4e-70263
NC_005810:515744:530002530002530577576Yersinia pestis biovar Microtus str. 91001, complete genomeputative transcriptional regulator4e-70263
NC_010465:4222586:422502142250214225596576Yersinia pseudotuberculosis YPIII, complete genometranscriptional regulator, TetR family4e-70263
NC_006155:456000:470551470551471126576Yersinia pseudotuberculosis IP 32953, complete genomeputative TetR-family regulatory protein4e-70263
NC_008149:3790897:379608237960823796657576Yersinia pestis Nepal516, complete genomeTetR-family regulatory protein4e-70263
NC_009381:4169353:417453841745384175113576Yersinia pestis Pestoides F chromosome, complete genomeputative transcriptional regulator4e-70263
NC_014029:331919:403186403186403761576Yersinia pestis Z176003 chromosome, complete genomeputative TetR-family regulatory protein4e-70263
NC_017154:331921:345365345365345940576Yersinia pestis D106004 chromosome, complete genomeputative TetR-family regulatory protein4e-70263
NC_017168:751078:756263756263756838576Yersinia pestis A1122 chromosome, complete genomeputative transcriptional regulator4e-70263
NC_009832:426993:451519451519452109591Serratia proteamaculans 568, complete genometranscriptional regulator, TetR family6e-67253
NC_013961:3269368:327428032742803274876597Erwinia amylovora, complete genomeHTH-type transcriptional regulator yjdC3e-64244
NC_012917:569856:585106585106585681576Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeputative transcriptional regulator, TetR family2e-63241
NC_020211:379000:397545397545398120576Serratia marcescens WW4, complete genomeputative transcriptional regulator2e-63241
NC_013592:577831:592254592254592829576Dickeya dadantii Ech586, complete genometranscriptional regulator, TetR family3e-63240
NC_012880:3982383:398589639858963986471576Dickeya dadantii Ech703, complete genometranscriptional regulator, TetR family1e-62239
NC_012912:4012112:401569040156904016265576Dickeya zeae Ech1591, complete genometranscriptional regulator, TetR family6e-63239
NC_010554:2789722:279282327928232793395573Proteus mirabilis HI4320, complete genomehypothetical protein1e-62238
NC_004547:667988:690300690300690875576Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-62238
NC_013956:455000:466493466493467071579Pantoea ananatis LMG 20103 chromosome, complete genomeYjdC3e-61234
NC_013850:4993307:501941150194115020001591Klebsiella variicola At-22 chromosome, complete genomeputative transcriptional regulator, TetR family3e-60231
NC_004431:4955658:497176749717674972366600Escherichia coli CFT073, complete genomeProtein yjdC2e-59228
NC_015663:1902344:192662719266271927202576Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative transcriptional regulator4e-59227
NC_010067:3204682:320642232064223206997576Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-58225
NC_006905:4486433:450147145014714502046576Salmonella enterica subsp. enterica serovar Choleraesuis strputative bacterial regulatory protein, merR family2e-58225
NC_011147:4297513:431219643121964312771576Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional regulator2e-58225
NC_011080:4543000:456617945661794566754576Salmonella enterica subsp. enterica serovar Newport str. SL254,transcriptional regulator, TetR family1e-58225
NC_011274:4385039:439996843999684400543576Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator2e-58224
NC_003197:4551880:456677045667704567345576Salmonella typhimurium LT2, complete genomeputative regulatory protein2e-58224
NC_011205:4564645:457928345792834579858576Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853transcriptional regulator2e-58224
NC_011294:4409137:442206444220644422639576Salmonella enterica subsp. enterica serovar Enteritidis strtranscriptional regulator2e-58224
NC_016810:4573172:458735145873514587926576Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator2e-58224
NC_016831:4367000:438011343801134380688576Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transcriptional regulator2e-58224
NC_016856:4563435:457960145796014580176576Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transcriptional regulator2e-58224
NC_016857:4573173:458735245873524587927576Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative transcriptional regulator2e-58224
NC_016860:4649274:466416446641644664739576Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator2e-58224
NC_016863:4513106:452720745272074527782576Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transcriptional regulator2e-58224
NC_017046:4571833:458601245860124586587576Salmonella enterica subsp. enterica serovar Typhimurium str. 798transcriptional regulator2e-58224
NC_015761:4188250:421535042153504215925576Salmonella bongori NCTC 12419, complete genometranscriptional regulator8e-58223
NC_011748:4792703:480830548083054808880576Escherichia coli 55989, complete genomeputative transcriptional regulator8e-58223
AP010958:5090696:512006551200655120640576Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted transcriptional regulator8e-58223
CU928145:4792703:480830548083054808880576Escherichia coli 55989 chromosome, complete genomeputative transcriptional regulator8e-58223
NC_011745:4862218:488138148813814881956576Escherichia coli ED1a chromosome, complete genomeputative transcriptional regulator8e-58223
NC_013353:5090696:512006551200655120640576Escherichia coli O103:H2 str. 12009, complete genometranscriptional regulator8e-58223
NC_021066:3703725:370725837072583707833576Raoultella ornithinolytica B6, complete genometranscriptional regulator7e-58223
NC_014618:4312295:431734043173404317930591Enterobacter cloacae SCF1 chromosome, complete genomeregulatory protein TetR2e-57221
NC_003198:4513900:454326445432644543839576Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator2e-57221
NC_007712:532500:546200546200546775576Sodalis glossinidius str. 'morsitans', complete genomeputative transcriptional regulator8e-54209
NC_012968:507988:525242525242525805564Methylotenera mobilis JLW8, complete genometranscriptional regulator, TetR family1e-1376.3
NC_015968:2195645:222134322213432221918576Enterobacter asburiae LF7a chromosome, complete genomeregulatory protein TetR2e-1272.4
NC_015947:2231493:225504722550472255616570Burkholderia sp. JV3 chromosome, complete genomeregulatory protein TetR1e-1169.7
NC_014500:1862000:187730718773071877909603Dickeya dadantii 3937 chromosome, complete genomeTetR family transcriptional regulator1e-0963.2
NC_016641:3272500:328989932898993290471573Paenibacillus terrae HPL-003 chromosome, complete genomeTetR family transcriptional regulator1e-0962.8
NC_007508:5093365:510727451072745107843570Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative transcriptional regulator, TetR family7e-0857.4
NC_009925:1184442:120783412078341208415582Acaryochloris marina MBIC11017, complete genometranscriptional regulator, TetR family1e-0653.1
NC_016935:3229500:323418232341823234751570Paenibacillus mucilaginosus 3016 chromosome, complete genometranscriptional regulator3e-0651.6
NC_015690:2674187:268368126836812684250570Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional regulator3e-0651.6
NC_017186:7480714:749817374981737498775603Amycolatopsis mediterranei S699 chromosome, complete genomeTetR family transcriptional regulator5e-0650.8
NC_014318:7480669:749812874981287498730603Amycolatopsis mediterranei U32 chromosome, complete genomeTetR family transcriptional regulator5e-0650.8