Pre_GI: BLASTP Hits

Some Help

Query: NC_004631:1587000:1597311 Salmonella enterica subsp. enterica serovar Typhi Ty2, complete

Start: 1597311, End: 1597715, Length: 405

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This pathogenic strain of Salmonella typhi was isolated in the early 1970s. It contains no multidrug resistance plasmids and has been used for vaccine development. This serovar is a human-specific organism that causes the life-threatening illness Typhoid fever which is acquired by coming into contact with contaminated food or water. Annually, 17 million people are infected, with 600,000 fatalities, mostly in developing countries. It contains multiple fimbrial operons that may be used to create extracellular appendages for attachment and entry into host intestinal epithelial cells. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:1582273:159426115942611594665405Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Cytochrome b5611e-72271
NC_003198:1378457:138346613834661383870405Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative cytochrome1e-72271
NC_011294:1493849:149873214987321499262531Salmonella enterica subsp. enterica serovar Enteritidis strcytochrome b5615e-72268
NC_016831:1468691:148525814852581485788531Salmonella enterica subsp. enterica serovar Gallinarum/pullorumcytochrome b561 (cytochrome b-561)6e-72268
NC_011274:1544653:154953615495361550066531Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cytochrome b5616e-72268
NC_011205:1633353:163825416382541638784531Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853cytochrome b5616e-72268
NC_011080:1709612:172617617261761726706531Salmonella enterica subsp. enterica serovar Newport str. SL254,cytochrome B5616e-72268
NC_012125:2143246:214812921481292148659531Salmonella enterica subsp. enterica serovar Paratyphi C straincytochrome b5611e-71267
NC_011149:1429523:147679914767991477329531Salmonella enterica subsp. enterica serovar Agona str. SL483,cytochrome B5614e-71265
NC_011083:1761352:177792617779261778456531Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,cytochrome B5614e-71265
NC_011094:1683979:170056317005631701093531Salmonella enterica subsp. enterica serovar Schwarzengrund strcytochrome b5615e-71265
NC_010102:1388344:139321213932121393742531Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-70264
NC_003197:1713259:172982317298231730353531Salmonella typhimurium LT2, complete genomecytochrome b5612e-70264
NC_016810:1670112:168667616866761687206531Salmonella enterica subsp. enterica serovar Typhimurium strcytochrome b561 (cytochrome b-561)2e-70264
NC_016856:1723236:173980017398001740330531Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Scytochrome b5612e-70264
NC_016860:1710950:172751417275141728044531Salmonella enterica subsp. enterica serovar Typhimurium strcytochrome b5612e-70264
NC_016863:1671428:168799216879921688522531Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1cytochrome b5612e-70264
NC_016857:1670112:168667616866761687242567Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74cytochrome b5611e-70264
NC_017046:1669995:168655916865591687125567Salmonella enterica subsp. enterica serovar Typhimurium str. 798cytochrome b561 (cytochrome b-561)1e-70264
NC_010067:1300606:130550713055071306037531Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-70262
NC_015761:1599000:161285716128571613309453Salmonella bongori NCTC 12419, complete genomecytochrome1e-66251
NC_015663:4347187:435406543540654354592528Enterobacter aerogenes KCTC 2190 chromosome, complete genomecytochrome b5614e-50196
NC_020181:1057476:106854610685461069073528Enterobacter aerogenes EA1509E, complete genomeCytochrome b(561)4e-50196
NC_013592:3618248:362997236299723630505534Dickeya dadantii Ech586, complete genomecytochrome B5616e-32135
NC_012880:1127997:113462011346201135153534Dickeya dadantii Ech703, complete genomecytochrome B5613e-31133
CP002185:2181936:219377921937792194309531Escherichia coli W, complete genomepredicted cytochrome3e-25113
AC_000091:2027648:204450520445052045035531Escherichia coli W3110 DNA, complete genomepredicted cytochrome3e-25113
NC_009800:2049346:206146820614682061998531Escherichia coli HS, complete genomenickel-dependent hydrogenase, b-type cytochrome subunit3e-25113
AP010958:2272919:228151922815192282049531Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted cytochrome3e-25113
NC_010473:2119480:213140021314002131930531Escherichia coli str. K-12 substr. DH10B, complete genomepredicted cytochrome3e-25113
CP002516:1902431:191154619115461912076531Escherichia coli KO11, complete genomeputative cytochrome3e-25113
NC_011741:2091249:210407421040742104604531Escherichia coli IAI1 chromosome, complete genomeputative cytochrome4e-25113
CU928160:2091249:210407421040742104604531Escherichia coli IAI1 chromosome, complete genomeputative cytochrome4e-25113
NC_000913:2028472:204039220403922040922531Escherichia coli K12, complete genomepredicted cytochrome3e-25113
NC_010498:1210145:121650112165011217031531Escherichia coli SMS-3-5, complete genomenickel-dependent hydrogenase, b-type cytochrome subunit3e-25113
NC_009801:2159123:217183421718342172364531Escherichia coli E24377A, complete genomenickel-dependent hydrogenase, b-type cytochrome subunit3e-25113
NC_013941:2425233:243666424366642437224561Escherichia coli O55:H7 str. CB9615 chromosome, complete genomecytochrome3e-25113
NC_007613:1038000:105028110502811050841561Shigella boydii Sb227, complete genomeputative cytochrome3e-25113
NC_016902:1902431:191154619115461912076531Escherichia coli KO11FL chromosome, complete genomeputative cytochrome3e-25113
NC_013364:2522888:253432725343272534857531Escherichia coli O111:H- str. 11128, complete genomeputative cytochrome3e-25113
NC_013353:2272919:228151922815192282049531Escherichia coli O103:H2 str. 12009, complete genomecytochrome3e-25113
NC_012967:1967675:198036719803671980897531Escherichia coli B str. REL606 chromosome, complete genomeputative cytochrome3e-25113
NC_012759:1920955:193287519328751933405531Escherichia coli BW2952 chromosome, complete genomeputative cytochrome3e-25113
NC_011353:2563056:257451725745172575047531Escherichia coli O157:H7 str. EC4115 chromosome, complete genomenickel-dependent hydrogenase, b-type cytochrome subunit1e-24112
NC_013008:2561586:257349825734982574028531Escherichia coli O157:H7 str. TW14359 chromosome, complete genomecytochrome1e-24112
NC_011415:2248417:226030622603062260836531Escherichia coli SE11 chromosome, complete genomeputative cytochrome8e-25112
NC_002655:2730659:274209127420912742651561Escherichia coli O157:H7 EDL933, complete genomeputative cytochrome8e-25112
NC_002695:2655445:266687626668762667436561Escherichia coli O157:H7 str. Sakai, complete genomeputative cytochrome8e-25112
NC_012947:1769438:179476217947621795271510Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completecytochrome B5615e-2199.8
NC_003197:1320861:133744813374481337978531Salmonella typhimurium LT2, complete genomeputative inner membrane protein7e-1889.4
NC_006905:1342474:136906913690691369596528Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein7e-1889.4
NC_012125:2531817:253637525363752536902528Salmonella enterica subsp. enterica serovar Paratyphi C straincytochrome7e-1889.4
NC_016810:1276340:129430112943011294831531Salmonella enterica subsp. enterica serovar Typhimurium strputative cytochrome7e-1889.4
NC_016856:1326503:134742313474231347953531Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein7e-1889.4
NC_016857:1276340:129430112943011294831531Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein7e-1889.4
NC_016860:1317174:133513513351351335542408Salmonella enterica subsp. enterica serovar Typhimurium strputative inner membrane protein7e-1889.4
NC_016863:1277652:129561312956131296143531Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein7e-1889.4
NC_017046:1277787:129437412943741294781408Salmonella enterica subsp. enterica serovar Typhimurium str. 798cytochrome7e-1889.4
NC_011205:2024458:202901320290132029543531Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853nickel-dependent hydrogenase, B-type cytochrome subunit7e-1889.4
NC_011274:1928939:193349419334941934024531Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91cytochrome7e-1889.4
NC_011294:1896168:190072319007231901253531Salmonella enterica subsp. enterica serovar Enteritidis strcytochrome7e-1889.4
NC_016832:1182496:120356512035651203972408Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Cytochrome b561 13e-1787.4
NC_010102:1779707:178426217842621784792531Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-1787
NC_006511:1654959:166088916608891661419531Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative cytochrome3e-1787
NC_004631:1182883:120459312045931205123531Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative cytochrome3e-1787
NC_003198:1771432:177600917760091776539531Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative cytochrome3e-1787
NC_011147:1650142:165607216560721656602531Salmonella enterica subsp. enterica serovar Paratyphi A strcytochrome3e-1787
NC_011149:1870931:187548618754861876016531Salmonella enterica subsp. enterica serovar Agona str. SL483,nickel-dependent hydrogenase, B-type cytochrome subunit4e-1786.7
NC_011094:1282385:130411313041131304643531Salmonella enterica subsp. enterica serovar Schwarzengrund strcytochrome B5617e-1785.9
NC_014618:57707:626146261463156543Enterobacter cloacae SCF1 chromosome, complete genomecytochrome b5614e-1580.1
NC_014307:2760347:278791427879142788438525Ralstonia solanacearum CFBP2957 chromosome, complete genomecytochrome b5611e-1375.5
NC_020541:2487427:249215124921512492690540Rhodanobacter sp. 2APBS1, complete genomecytochrome B5611e-1374.7
NC_017171:1331794:136078713607871361365579Acinetobacter baumannii MDR-ZJ06 chromosome, complete genomeputative cytochrome2e-1271.2
NC_003295:199354:221044221044221568525Ralstonia solanacearum GMI1000, complete genomePROBABLE CYTOCHROME B561 CYTOCHROME TRANSMEMBRANE PROTEIN2e-1167.8
NC_014618:4114004:413118041311804131719540Enterobacter cloacae SCF1 chromosome, complete genomecytochrome4e-1166.6
NC_007964:2152000:215935021593502159904555Nitrobacter hamburgensis X14, complete genomecytochrome B5614e-1166.6
NC_007650:722961:742611742611743300690Burkholderia thailandensis E264 chromosome II, complete sequencecytochrome b561, putative6e-1062.8
NC_015761:1181186:121478312147831215313531Salmonella bongori NCTC 12419, complete genomecytochrome7e-1062.8
NC_016822:2201388:221895422189542219376423Shigella sonnei 53G, complete genomecytochrome9e-1062
NC_014722:193500:209024209024209554531Burkholderia rhizoxinica HKI 454, complete genomeCytochrome b5612e-0960.8
NC_013722:1689125:169457216945721695357786Xanthomonas albilineans, complete genomehypothetical cytochrome-like transmembrane protein2e-0960.8
NC_020209:4312892:435554043555404356091552Pseudomonas poae RE*1-1-14, complete genomecytochrome b561 family protein3e-0960.5
NC_014306:1810548:182732018273201827874555Erwinia billingiae Eb661, complete genomeCytochrome b561-like protein2e-0857.8
NC_007947:2447635:245691424569142457477564Methylobacillus flagellatus KT, complete genomecytochrome B5611e-0755.5
NC_010084:3115:746574657998534Burkholderia multivorans ATCC 17616 chromosome 1, completecytochrome B5611e-0755.1
NC_010804:52000:683086830868841534Burkholderia multivorans ATCC 17616 chromosome 1, completeputative cytochrome B5611e-0755.1
NC_010505:5525461:553357255335725534096525Methylobacterium radiotolerans JCM 2831, complete genomecytochrome B5613e-0753.5
NC_020211:2012480:201950520195052020059555Serratia marcescens WW4, complete genomeputative cytochrome b5611e-0652
NC_019907:845663:848043848043848579537Liberibacter crescens BT-1 chromosome, complete genomeCytochrome B5612e-0651.6
NC_010676:3009980:304669730466973047239543Burkholderia phytofirmans PsJN chromosome 2, complete sequencecytochrome B5612e-0651.6
NC_009076:75535:800578005780584528Burkholderia pseudomallei 1106a chromosome I, complete sequenceputative [Ni] hydrogenase, b-type cytochrome subunit2e-0650.8
NC_007651:72952:775367753678063528Burkholderia thailandensis E264 chromosome I, complete sequencecytochrome b561, putative3e-0650.4
NC_010505:4990472:499876449987644999288525Methylobacterium radiotolerans JCM 2831, complete genomecytochrome B5615e-0649.7