Pre_GI Gene

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Host: NC_006511 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_006511:1654959 Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar has a narrow host range and causes a typhoid-like (paratyphoid fever) illness in humans. It is especially prevalent in southern and eastern Asia, and has been associated with some particularly virulent outbreaks. A number of isolates are increasingly antibiotic resistant. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
16549591655549591putative ABC transport ATP-binding subunitQuickGO ontologyBLASTP
16555431656340798putative ABC transport ATP-binding proteinQuickGO ontologyBLASTP
16563341657146813putative inner membrane transport proteinQuickGO ontologyBLASTP
16571361658113978putative inner membrane transport proteinQuickGO ontologyBLASTP
165811016597441635putative substrate-binding transport proteinQuickGO ontologyBLASTP
16604261660740315putative lipoproteinQuickGO ontologyBLASTP
16608891661419531putative cytochromeQuickGO ontologyBLASTP
16615011662463963hypothetical proteinBLASTP
16629511663124174hypothetical proteinBLASTP
1663379166345274tRNA-ArgQuickGO ontology
16638431664400558outer membrane invasion proteinQuickGO ontologyBLASTP
16647781664906129hypothetical proteinBLASTP
16649921665156165hypothetical proteinBLASTP
16652051665468264putative outer membrane virulence proteinQuickGO ontologyBLASTP
16656001665812213putative cold shock proteinQuickGO ontologyBLASTP
16662141666735522putative lipoproteinQuickGO ontologyBLASTP
16669161667155240putative virulence proteinQuickGO ontologyBLASTP
16680291668838810putative toxin-like proteinQuickGO ontologyBLASTP
16689111669288378hypothetical proteinBLASTP
16694361669978543hypothetical proteinBLASTP
16701701670898729putative pertussis-like toxin subunitQuickGO ontologyBLASTP
16709151671328414putative pertussis-like toxin subunitQuickGO ontologyBLASTP
167227516733991125putative bacteriophage proteinQuickGO ontologyBLASTP