Pre_GI Gene

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Host: NC_012947 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_012947:1769438 Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, complete

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolation: Derivative of E. coli strain B; Temp: Mesophile; Temp: 37 C; Habitat: Host, Human intestinal microflora. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.


This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
17688961769441546adenosylcobinamide kinaseadenosylcobinamide-phosphate guanylyltransferaseQuickGO ontologyBLASTP
17694381770181744cobalamin synthaseQuickGO ontologyBLASTP
177019317712721080nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferaseQuickGO ontologyBLASTP
17713341772269936hypothetical proteinBLASTP
1772325177240076tRNA-AsnQuickGO ontologyBLASTP
17727271773644918nitrogen assimilation transcriptional regulatorQuickGO ontologyBLASTP
17737461774696951transcriptional regulator CblQuickGO ontologyBLASTP
1774734177480976tRNA-AsnQuickGO ontologyBLASTP
177497017764571488hypothetical proteinBLASTP
1776558177663376tRNA-AsnQuickGO ontologyBLASTP
17770871777803717hypothetical proteinBLASTP
177814617796001455AMP nucleosidaseQuickGO ontologyBLASTP
177970217810181317shikimate transporterQuickGO ontologyBLASTP
178264717897237077Ig domain protein group 1 domain proteinQuickGO ontologyBLASTP
17897641789913150hypothetical proteinBLASTP
1790037179011276tRNA-AsnQuickGO ontologyBLASTP
17902131791010798hypothetical proteinBLASTP
1791104179119390tRNA-SerQuickGO ontologyBLASTP
179181017930181209transposase IS4 family proteinQuickGO ontologyBLASTP
17931261793512387BLASTP
17937691794419651hypothetical proteinBLASTP
17947621795271510cytochrome B561QuickGO ontologyBLASTP
179528117964891209transposase IS4 family proteinQuickGO ontologyBLASTP
17965491796854306sulfite oxidase subunit YedZQuickGO ontologyBLASTP
179685517978591005sulfite oxidase subunit YedYQuickGO ontologyBLASTP
17979681798381414hydroxyisourate hydrolaseQuickGO ontologyBLASTP
17984031799185783transcriptional regulatory protein YedWQuickGO ontologyBLASTP
179918518005431359heavy metal sensor signal transduction histidine kinaseQuickGO ontologyBLASTP
18006511801502852chaperone protein HchAQuickGO ontologyBLASTP
18015231801666144hypothetical proteinBLASTP
18039161804218303hypothetical proteinBLASTP
18042581804953696hypothetical proteinBLASTP
180502018064381419DNA cytosine methylaseQuickGO ontologyBLASTP
18064191806889471DNA mismatch endonuclease VsrQuickGO ontologyBLASTP
18068781807798921hypothetical proteinBLASTP
18079711808888918hypothetical proteinBLASTP
18089671809149183hypothetical proteinBLASTP
180932018110141695diguanylate cyclaseQuickGO ontologyBLASTP
18110111811826816mannosyl-3-phosphoglycerate phosphataseQuickGO ontologyBLASTP
18121241812351228hypothetical proteinBLASTP
18125141812702189hypothetical proteinBLASTP
18127461813369624LuxR family transcriptional regulatorQuickGO ontologyBLASTP