Pre_GI Gene

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Host: NC_016810 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_016810:1276340 Salmonella enterica subsp. enterica serovar Typhimurium str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
127634012777101371adenylosuccinate lyaseQuickGO ontologyBLASTP
12777141278361648hypothetical proteinBLASTP
127844212795481107tRNAQuickGO ontologyBLASTP
12796021280063462putative mutT family proteinQuickGO ontologyBLASTP
12800751280404330hypothetical proteinBLASTP
12804011281066666putative ribosomal large subunit pseudouridine synthase BQuickGO ontologyBLASTP
128123812824881251isocitrate dehydrogenaseQuickGO ontologyBLASTP
128293612840601125bacteriophage proteinQuickGO ontologyBLASTP
12850421285830789lipoproteinQuickGO ontologyBLASTP
12863191286558240putative virulence protein MsgAQuickGO ontologyBLASTP
12867491287270522putative lipoproteinQuickGO ontologyBLASTP
12876851287897213cold shock protein CspHQuickGO ontologyBLASTP
12880291288292264putative outer membrane virulence protein PagDQuickGO ontologyBLASTP
12891911289661471outer membrane invasion protein PagCQuickGO ontologyBLASTP
12908981291242345hypothetical proteinBLASTP
12919451292217273hypothetical proteinBLASTP
12923691292836468putative heat shock proteinQuickGO ontologyBLASTP
129317512942181044hypothetical proteinBLASTP
12943011294831531putative cytochromeQuickGO ontologyBLASTP
12949801295294315putative lipoproteinQuickGO ontologyBLASTP
129597612976101635putative substrate-binding transport proteinQuickGO ontologyBLASTP
12976101298584975putative inner membrane transport proteinQuickGO ontologyBLASTP
12985741299386813putative inner membrane transport proteinQuickGO ontologyBLASTP
12993801300177798putative ABC transport ATP-binding proteinQuickGO ontologyBLASTP
13001711300761591putative ABC transport ATP-binding subunitQuickGO ontologyBLASTP
130084313019761134hypothetical proteinBLASTP
13021701302496327hypothetical proteinBLASTP
13026931303340648hypothetical proteinBLASTP
13034491304237789aminoglycoside-resistance proteinQuickGO ontologyBLASTP