Pre_GI: BLASTP Hits

Some Help

Query: NC_001263:1378605:1392928 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 1392928, End: 1394043, Length: 1116

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015966:2337833:2358239235823923594591221Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomecell wall hydrolase/autolysin3e-25116
NC_011146:1998981:2017847201784720191061260Geobacter bemidjiensis Bem, complete genomecell wall hydrolase/autolysin5e-24112
NC_014973:1941500:1960295196029519615721278Geobacter sp. M18 chromosome, complete genomecell wall hydrolase/autolysin3e-23109
NC_008095:4669947:4670944467094446727431800Myxococcus xanthus DK 1622, complete genomeN-acetylmuramoyl-L-alanine amidase domain protein2e-22107
NC_012926:727716:7307667307667335732808Streptococcus suis BM407 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-21104
NC_012925:1125876:1145568114556811486753108Streptococcus suis P1/7, complete genomeN-acetylmuramoyl-L-alanine amidase1e-21103
NC_009442:1216355:1234262123426212373693108Streptococcus suis 05ZYH33 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-21103
NC_015589:1630461:163505816350581635783726Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase5e-21102
NC_015520:3060495:306407430640743064778705Mahella australiensis 50-1 BON chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase7e-21101
NC_007604:2213659:2213659221365922147081050Synechococcus elongatus PCC 7942, complete genomeCell wall hydrolase/autolysin4e-2099.4
NC_014220:2239594:224053722405372241220684Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD9e-2098.2
NC_010718:237962:241113241113241916804Natranaerobius thermophilus JW/NM-WN-LF, complete genomeN-acetylmuramoyl-L-alanine amidase2e-1997.1
NC_015519:2489728:250441425044142505076663Tepidanaerobacter sp. Re1 chromosome, complete genomecell wall hydrolase/autolysin4e-1995.9
NC_020126:2883194:288603228860322886841810Myxococcus stipitatus DSM 14675, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1995.1
NC_007644:1293701:131535413153541316082729Moorella thermoacetica ATCC 39073, complete genomeN-acetylmuramoyl-L-alanine amidase9e-1994.7
NC_007760:3848190:387012238701223870871750Anaeromyxobacter dehalogenans 2CP-C, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1894.4
NC_014328:180482:1848201848201866311812Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative N-acetylmuramoyl-L-alanine amidase1e-1791.3
NC_020410:1781884:178188417818841782642759Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeSporulation-specific N-acetylmuramoyl-L-alanine amidase1e-1790.9
NC_008255:1344674:134540813454081346205798Cytophaga hutchinsonii ATCC 33406, complete genomeN-acetylmuramoyl-L-alanine amidase I2e-1790.1
NC_015276:2804874:2819148281914828204761329Marinomonas mediterranea MMB-1 chromosome, complete genomecell wall hydrolase/autolysin3e-1790.1
NC_014371:1358615:1369373136937313707041332Prevotella melaninogenica ATCC 25845 chromosome chromosome II,N-acetylmuramoyl-L-alanine amidase3e-1789.7
NC_015565:287900:331818331818332537720Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completecell wall hydrolase/autolysin5e-1789
NC_016047:2480921:248393824839382484552615Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completeN-acetylmuramoyl-L-alanine amidase6e-1789
NC_016077:998741:105235210523521053323972Acidaminococcus intestini RyC-MR95 chromosome, complete genometranscriptional regulator7e-1788.6
NC_010723:3133302:3141134314113431431912058Clostridium botulinum E3 str. Alaska E43, complete genomesurface protein PspC1e-1687.8
NC_009089:1202261:1214547121454712165862040Clostridium difficile 630, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)3e-1686.3
NC_016584:1583685:1586858158685815880421185Desulfosporosinus orientis DSM 765 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase6e-1685.5
NC_013316:1081044:1093266109326610953052040Clostridium difficile R20291, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)8e-1685.1
NC_019978:686362:688393688393689076684Halobacteroides halobius DSM 5150, complete genomeN-acetylmuramoyl-L-alanine amidase9e-1684.7
NC_021184:4493440:451665445166544517340687Desulfotomaculum gibsoniae DSM 7213, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1584.7
NC_011898:851892:866523866523867272750Clostridium cellulolyticum H10, complete genomecell wall hydrolase/autolysin1e-1584.3
NC_014829:178000:178742178742179461720Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD1e-1584.3
NC_009654:2958316:2979555297955529808831329Marinomonas sp. MWYL1, complete genomeN-acetylmuramoyl-L-alanine amidase2e-1583.6
NC_010424:1563033:1592155159215515944102256Candidatus Desulforudis audaxviator MP104C, complete genomeN-acetylmuramoyl-L-alanine amidase3e-1583.2
NC_011837:238160:266596266596267321726Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-1582.8
NC_009706:238160:266605266605267321717Clostridium kluyveri DSM 555 chromosome, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase3e-1582.8
NC_016751:1623756:1642310164231016436831374Marinitoga piezophila KA3 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase4e-1582.8
NC_009089:117980:123166123166123870705Clostridium difficile 630, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase4e-1582.8
NC_013316:120759:126866126866127618753Clostridium difficile R20291, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase5e-1582.4
NC_009328:2905000:292383329238332924537705Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1582
NC_016627:2870900:2888618288861828896881071Clostridium clariflavum DSM 19732 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1582
NC_004337:2548288:254828825482882549157870Shigella flexneri 2a str. 301, complete genomeN-acetylmuramoyl-l-alanine amidase I9e-1581.6
NC_004741:2526421:252642125264212527290870Shigella flexneri 2a str. 2457T, complete genomeN-acetylmuramoyl-l-alanine amidase I9e-1581.6
NC_011297:1167615:1185899118589911875631665Dictyoglomus thermophilum H-6-12, complete genomecell wall hydrolase/autolysin1e-1480.9
NC_014652:801653:831651831651832199549Caldicellulosiruptor hydrothermalis 108 chromosome, completecell wall hydrolase/autolysin2e-1480.5
NC_018664:1573925:158825715882571589231975Clostridium acidurici 9a chromosome, complete genomeputative cell wall amidase LytH3e-1479.7
NC_004342:3370310:3393746339374633948371092Leptospira interrogans serovar Lai str. 56601 chromosome I,N-acetylmuramoyl-L-alanine amidase8e-1478.6
NC_015555:2259500:2300952230095223023821431Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeN-acetylmuramoyl-L-alanine amidase9e-1478.2
NC_010723:223935:274089274089274751663Clostridium botulinum E3 str. Alaska E43, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD1e-1377.8
NC_004557:2711702:272737227273722728097726Clostridium tetani E88, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase2e-1377.4
NC_016584:233486:254592254592255323732Desulfosporosinus orientis DSM 765 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase2e-1377
NC_009089:1202261:1217070121707012191032034Clostridium difficile 630, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)4e-1375.9
NC_013316:1081044:1095797109579710978302034Clostridium difficile R20291, complete genomecell surface protein (putative N-acetylmuramoyl-L-alanine amidase)4e-1375.9
UCMB5137:1375622:137628713762871377051765Bacillus atrophaeus UCMB-5137N-acetylmuramoyl-L-alanine amidase5e-1375.5
NC_010673:703816:7100877100877111121026Borrelia hermsii DAH, complete genomeN-acetylmuramoyl-L-alanine amidase6e-1375.5
NC_013921:1396500:140293514029351403645711Thermoanaerobacter italicus Ab9 chromosome, complete genomecell wall hydrolase/autolysin7e-1375.1
NC_019908:1043401:104251710425171043449933Brachyspira pilosicoli P43/6/78 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase8e-1375.1
NC_000964:3658000:3658149365814936596391491Bacillus subtilis subsp. subtilis str. 168, complete genomeN-acetylmuramoyl-L-alanine amidase (major autolysin) (CWBP49)1e-1274.3
NC_013411:597235:632480632480633163684Geobacillus sp. Y412MC61, complete genomecell wall hydrolase/autolysin2e-1273.9
NC_014915:2963500:297077229707722971452681Geobacillus sp. Y412MC52 chromosome, complete genomecell wall hydrolase/autolysin2e-1273.9
NC_006177:324363:368087368087368941855Symbiobacterium thermophilum IAM 14863, complete genomesporulation specific N-acetylmuramoyl-L-alanine amidase2e-1273.6
NC_014209:1910109:191010919101091910789681Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,N-acetylmuramoyl-L-alanine amidase CwlD4e-1272.8
NC_008710:703740:7075257075257085501026Borrelia turicatae 91E135, complete genomeN-acetylmuramoyl-L-alanine amidase4e-1272.8
NC_010001:4586000:459873045987304599443714Clostridium phytofermentans ISDg, complete genomecell wall hydrolase/autolysin6e-1272
NC_015144:1526669:1526669152666915279791311Weeksella virosa DSM 16922 chromosome, complete genomecell wall hydrolase/autolysin2e-1170.9
NC_012691:2614603:2614603261460326161981596Tolumonas auensis DSM 9187, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1170.9
NC_009697:3659834:366081736608173661521705Clostridium botulinum A str. ATCC 19397 chromosome, completeN-acetylmuramoyl-L-alanine amidase2e-1170.5
NC_010723:3133302:3143492314349231457052214Clostridium botulinum E3 str. Alaska E43, complete genomesurface protein PspC2e-1170.1
NC_019970:2551607:2572748257274825741781431Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeN-acetylmuramoyl-L-alanine amidase3e-1169.7
NC_019897:329945:329945329945330784840Thermobacillus composti KWC4 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase CwlD4e-1169.7
NC_011567:139598:140106140106140804699Anoxybacillus flavithermus WK1, complete genomeN-acetylmuramoyl-L-alanine amidase5e-1169.3
NC_009698:3553365:355792635579263558630705Clostridium botulinum A str. Hall chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1168.6
NC_007298:3271071:3293633329363332949821350Dechloromonas aromatica RCB, complete genomeCell wall hydrolase/autolysin1e-1067.8
NC_014328:4387303:442589644258964426588693Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1067.8
NC_014551:157418:157418157418158131714Bacillus amyloliquefaciens DSM 7, complete genomeN-acetylmuramoyl-L-alanine amidase1e-1067.8
NC_016593:868500:8686788686788700241347Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeN-acetylmuramoyl-L-alanine amidase2e-1067
NC_016513:1185241:1189805118980511912921488Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeN-acetylmuramoyl-L-alanine amidase5e-1065.9
NC_007946:3125577:3138193313819331395361344Escherichia coli UTI89, complete genomeN-acetylmuramoyl-L-alanine amidase AmiC precursor7e-1065.5
NC_007613:2699500:2710491271049127118341344Shigella boydii Sb227, complete genomeputative amidase6e-1065.5
NC_013416:875758:8803218803218818081488Aggregatibacter actinomycetemcomitans D11S-1, complete genomeN-acetylmuramoyl-L-alanine amidase6e-1065.5
NC_003901:2727361:2729681272968127310541374Methanosarcina mazei Go1, complete genomecell surface protein6e-1065.5
NC_013406:781308:801375801375802103729Paenibacillus sp. Y412MC10 chromosome, complete genomecell wall hydrolase/autolysin8e-1065.1
NC_010498:3023442:3036388303638830376411254Escherichia coli SMS-3-5, complete genomeN-acetylmuramoyl-L-alanine amidase AmiC7e-1065.1
NC_008253:2965573:2978391297839129796441254Escherichia coli 536, complete genomeputative amidase7e-1065.1
NC_011742:3057444:3070072307007230713251254Escherichia coli S88 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1065.1
NC_011745:3197584:3210529321052932117821254Escherichia coli ED1a chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1065.1
NC_013361:3823347:3836293383629338375461254Escherichia coli O26:H11 str. 11368 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase7e-1065.1
NC_020291:5981006:5985561598556159878882328Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeN-acetylmuramoyl-L-alanine amidase2e-0964.3
NC_006156:685344:7058667058667068731008Borrelia garinii PBi chromosome linear, complete sequencehypothetical protein2e-0963.9
NC_014363:645397:6753626753626777522391Olsenella uli DSM 7084 chromosome, complete genomecell wall hydrolase/autolysin2e-0963.5
NC_016632:120500:1329301329301342761347Serratia symbiotica str. 'Cinara cedri' chromosome, completeN-acetylmuramoyl-l-alanine amidase II3e-0963.2
NC_017208:108134:149586149586150299714Bacillus thuringiensis serovar chinensis CT-43 chromosome, completespore-specific N-acetylmuramoyl-L-alanine amidase3e-0962.8
NC_014171:109280:147537147537148250714Bacillus thuringiensis BMB171 chromosome, complete genomespore-specific N-acetylmuramoyl-L-alanine amidase3e-0962.8
NC_010519:1802294:1802294180229418035021209Haemophilus somnus 2336 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase9e-0961.6
NC_014500:4257145:4257145425714542588211677Dickeya dadantii 3937 chromosome, complete genomeN-acetylmuramoyl-l-alanine amidase II2e-0860.8
NC_018515:4660808:466437946643794665224846Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeN-acetylmuramoyl-L-alanine amidase3e-0860.1
NC_017328:2586171:258617125861712586794624Shigella flexneri 2002017 chromosome, complete genomeputative N-acetylmuramoyl-L-alanine amidase2e-0860.1
NC_009922:315870:3336633336633350961434Alkaliphilus oremlandii OhILAs, complete genomeSpoIID/LytB domain4e-0859.3
NC_014313:2059933:2059933205993320612041272Hyphomicrobium denitrificans ATCC 51888 chromosome, completecell wall hydrolase/autolysin5e-0858.9
NC_018704:176088:179814179814180518705Amphibacillus xylanus NBRC 15112, complete genomegermination-specific N-acetylmuramoyl-L-alanine amidase7e-0858.5
NC_016048:2055199:206947120694712070196726Oscillibacter valericigenes Sjm18-20, complete genomeputative N-acetylmuramoyl-L-alanine amidase4e-0756.2
NC_004193:205278:209362209362210093732Oceanobacillus iheyensis HTE831, complete genomegermination specific N-acetylmuramoyl-L-alanine amidase7e-0652