Pre_GI: OUP Neighbours

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Query: NC_009648:2465613 Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome

D: 50.7802

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a patient in 1994. Opportunistic pathogen that causes multiple hospital-acquired infections. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.

Number of Neighbours: 80




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandSubject Host Description Compositional Similarity Proposed Island FlowSubject Island D
NC_014561:153143Pantoea vagans C9-1 plasmid pPag1, complete sequence75.8456 %Subject Query28.1767
NC_010465:429095Yersinia pseudotuberculosis YPIII, complete genome77.7849 %Subject Query29.1646
NC_005810:4469156Yersinia pestis biovar Microtus str. 91001, complete genome79.0074 %Subject Query29.5112
NC_003143:4006884Yersinia pestis CO92, complete genome77.6532 %Subject Query29.6176
NC_008149:4053363Yersinia pestis Nepal516, complete genome78.2138 %Subject Query30.0006
NC_004088:266543Yersinia pestis KIM, complete genome78.0576 %Subject Query30.0081
NC_010694:962383Erwinia tasmaniensis, complete genome75.5913 %Subject Query30.0928
NC_006155:4302826Yersinia pseudotuberculosis IP 32953, complete genome78.2108 %Subject Query30.1556
NC_010634:4234932Yersinia pseudotuberculosis PB1/+, complete genome77.2978 %Subject Query30.3016
NC_015663:4447984Enterobacter aerogenes KCTC 2190 chromosome, complete genome75.6403 %Subject Query31.6444
NC_013282:3719500*Cronobacter turicensis, complete genome75.4013 %Subject Query31.6817
NC_008563:3119284Escherichia coli APEC O1, complete genome79.4179 %Subject Query31.9127
NC_014500:3519722Dickeya dadantii 3937 chromosome, complete genome76.3082 %Subject Query32.164
NC_012912:1229333Dickeya zeae Ech1591, complete genome75.2635 %Subject Query32.2592
NC_007712:1893066*Sodalis glossinidius str. 'morsitans', complete genome77.2457 %Subject Query32.276
NC_013508:1262333Edwardsiella tarda EIB202, complete genome77.2917 %Subject Query32.8692
NC_006155:1567306Yersinia pseudotuberculosis IP 32953, complete genome75.1899 %Subject Query33.2342
NC_012779:2664849Edwardsiella ictaluri 93-146, complete genome75.7016 %Subject Query33.7832
NC_014562:1698253Pantoea vagans C9-1 chromosome, complete genome76.1581 %Subject Query33.9839
NC_004547:3817656Erwinia carotovora subsp. atroseptica SCRI1043, complete genome75.9099 %Subject Query34.15
NC_013508:3593000Edwardsiella tarda EIB202, complete genome75.3309 %Subject Query34.4706
CU928160:256932Escherichia coli IAI1 chromosome, complete genome77.1201 %Subject Query34.5956
NC_012779:1939747Edwardsiella ictaluri 93-146, complete genome77.6348 %Subject Query34.6849
NC_013956:4579759Pantoea ananatis LMG 20103 chromosome, complete genome78.2445 %Subject Query34.8158
NC_012779:3316877Edwardsiella ictaluri 93-146, complete genome79.3229 %Subject Query34.9445
NC_010694:3055403Erwinia tasmaniensis, complete genome80.0429 %Subject Query35.0644
NC_010694:614985Erwinia tasmaniensis, complete genome76.1918 %Subject Query35.5876
NC_010067:3753971Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete76.3848 %Subject Query35.7065
NC_006905:3942753Salmonella enterica subsp. enterica serovar Choleraesuis str75.8425 %Subject Query35.749
NC_010067:632683Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete76.0938 %Subject Query35.8098
NC_009832:1946401Serratia proteamaculans 568, complete genome75.5882 %Subject Query35.908
NC_012779:2424967*Edwardsiella ictaluri 93-146, complete genome76.9792 %Subject Query35.992
NC_004631:685357*Salmonella enterica subsp. enterica serovar Typhi Ty2, complete78.2659 %Subject Query36.1113
NC_004631:3809678Salmonella enterica subsp. enterica serovar Typhi Ty2, complete75.098 %Subject Query36.1376
NC_013961:3083816Erwinia amylovora, complete genome80.5055 %Subject Query36.2172
NC_006511:682863*Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC76.1703 %Subject Query36.3874
NC_004431:1352906Escherichia coli CFT073, complete genome75.5024 %Subject Query36.4239
NC_007712:2287053Sodalis glossinidius str. 'morsitans', complete genome77.5092 %Subject Query36.533
AP010958:1472506Escherichia coli O103:H2 str. 12009 DNA, complete genome77.163 %Subject Query36.7127
NC_012779:2064582Edwardsiella ictaluri 93-146, complete genome77.0098 %Subject Query37.0151
NC_007712:433500Sodalis glossinidius str. 'morsitans', complete genome79.0564 %Subject Query37.0845
NC_003198:2297837Salmonella enterica subsp. enterica serovar Typhi str. CT18,77.2151 %Subject Query37.159
NC_002695:2893951Escherichia coli O157:H7 str. Sakai, complete genome75.4167 %Subject Query37.275
NC_011080:2342672Salmonella enterica subsp. enterica serovar Newport str. SL254,77.4724 %Subject Query37.4165
NC_009648:3476000Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome81.8168 %Subject Query37.4593
NC_006905:2355290Salmonella enterica subsp. enterica serovar Choleraesuis str77.2641 %Subject Query37.6094
NC_011750:1931384Escherichia coli IAI39 chromosome, complete genome76.1949 %Subject Query37.6581
NC_012962:3568046Photorhabdus asymbiotica, complete genome75.0858 %Subject Query37.813
NC_014500:894136Dickeya dadantii 3937 chromosome, complete genome75.0735 %Subject Query37.8586
NC_011149:2040396Salmonella enterica subsp. enterica serovar Agona str. SL483,78.2904 %Subject Query37.9381
NC_011149:2294500Salmonella enterica subsp. enterica serovar Agona str. SL483,75.9406 %Subject Query38.0253
NC_003198:2703013*Salmonella enterica subsp. enterica serovar Typhi str. CT18,75.2849 %Subject Query38.1505
NC_013716:4824541*Citrobacter rodentium ICC168, complete genome78.2537 %Subject Query38.2235
NC_012779:957558Edwardsiella ictaluri 93-146, complete genome75.2972 %Subject Query38.2879
NC_002655:1909139Escherichia coli O157:H7 EDL933, complete genome77.6654 %Subject Query38.4667
NC_013282:1256769Cronobacter turicensis, complete genome79.761 %Subject Query38.8742
NC_011750:2009889Escherichia coli IAI39 chromosome, complete genome75.0643 %Subject Query39.0625
NC_014228:2883500Xenorhabdus nematophila ATCC 19061, complete genome77.0098 %Subject Query39.0811
NC_012779:3176820*Edwardsiella ictaluri 93-146, complete genome80.8211 %Subject Query39.7546
NC_012779:996879Edwardsiella ictaluri 93-146, complete genome77.8891 %Subject Query39.7678
NC_006905:2805877*Salmonella enterica subsp. enterica serovar Choleraesuis str75.5453 %Subject Query39.786
NC_012779:305969Edwardsiella ictaluri 93-146, complete genome80.5208 %Subject Query39.836
NC_012779:2281700*Edwardsiella ictaluri 93-146, complete genome76.4246 %Subject Query40.1776
NC_014121:1822895Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete77.0374 %Subject Query40.59
NC_012779:2856051Edwardsiella ictaluri 93-146, complete genome75.4534 %Subject Query40.677
NC_013592:1424560Dickeya dadantii Ech586, complete genome76.9638 %Subject ←→ Query41.2418
NC_007645:3870466Hahella chejuensis KCTC 2396, complete genome76.6176 %Subject ←→ Query41.4216
NC_014228:3282500Xenorhabdus nematophila ATCC 19061, complete genome78.1189 %Subject ←→ Query41.4806
NC_012779:2928000*Edwardsiella ictaluri 93-146, complete genome75.674 %Subject ←→ Query41.5453
NC_012779:1449500*Edwardsiella ictaluri 93-146, complete genome79.5343 %Subject ←→ Query41.6091
NC_015172:850802*Syntrophobotulus glycolicus DSM 8271 chromosome, complete genome75.1042 %Subject ←→ Query41.6437
NC_015566:4662171Serratia sp. AS12 chromosome, complete genome75.1685 %Subject ←→ Query41.8855
NC_013283:113660Cronobacter turicensis plasmid pCTU1, complete sequence77.4173 %Subject ←→ Query42.151
NC_009648:293052*Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome76.4859 %Subject ←→ Query43.5401
NC_013508:2356865*Edwardsiella tarda EIB202, complete genome76.9853 %Subject ←→ Query44.5077
NC_013508:1289159*Edwardsiella tarda EIB202, complete genome76.8597 %Subject ←→ Query44.7971
NC_012779:2586175Edwardsiella ictaluri 93-146, complete genome76.4277 %Subject ←→ Query45.323
NC_009778:3832000Enterobacter sakazakii ATCC BAA-894, complete genome78.0208 %Subject ←→ Query45.4902
NC_009778:1141716Enterobacter sakazakii ATCC BAA-894, complete genome75.5116 %Subject ←→ Query48.5924
NC_009648:1487692Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome85.0214 %Subject ←→ Query49.6231