Pre_GI Gene

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Host: NC_011147 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_011147:2496808 Salmonella enterica subsp. enterica serovar Paratyphi A str

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is a clinical isolate collected from a child with paratyphoid fever in Karachi, Pakistan, 2004. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.


StartEndLengthCDS descriptionQuickGO ontologyBLASTP
24968082497719912scaffolding proteinQuickGO ontologyBLASTP
249773324997362004portal proteinQuickGO ontologyBLASTP
249991025014091500terminase large subunitQuickGO ontologyBLASTP
25013872501875489terminase small subunitQuickGO ontologyBLASTP
25018792502283405hypothetical proteinBLASTP
25028522503373522hypothetical proteinBLASTP
25035862504053468hypothetical proteinBLASTP
25040532504490438lysozymeQuickGO ontologyBLASTP
25044742504800327holinQuickGO ontologyBLASTP
25052352505858624antiterminationQuickGO ontologyBLASTP
25058552506043189hypothetical proteinBLASTP
25060402506402363hypothetical proteinBLASTP
25063992506689291hypothetical proteinBLASTP
25068872507063177hypothetical proteinBLASTP
25070562507397342hypothetical proteinBLASTP
25074002507576177hypothetical proteinBLASTP
25075432507716174hypothetical proteinBLASTP
25077132508159447hypothetical proteinBLASTP
25081162508412297hypothetical proteinBLASTP
2509113250919684hypothetical proteinBLASTP
250919625106321437DNA replicationQuickGO ontologyBLASTP
25106222511521900DNA replicationQuickGO ontologyBLASTP
25115142511660147hypothetical proteinBLASTP
25116952511976282transcriptional activator-regulatory proteinQuickGO ontologyBLASTP
25124132513102690transcriptional activator-regulatory proteinQuickGO ontologyBLASTP
25143172514619303hypothetical proteinBLASTP
25146322515219588superinfection exclusionQuickGO ontologyBLASTP
25154332515627195antirestriction proteinQuickGO ontologyBLASTP
25156642515957294hypothetical proteinBLASTP
25162722516424153hypothetical proteinBLASTP
25164052516593189hypothetical proteinBLASTP
25165832516726144hypothetical proteinBLASTP
25168522517430579hypothetical proteinBLASTP
25174302517714285hypothetical proteinBLASTP